Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 1.7e-309 1065.1 517 100.0
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 2.2e-94 350.5 540 38.0
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 3.2e-77 293.5 507 35.3
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 9.2e-77 292.0 469 35.6
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.2e-76 291.6 507 35.1
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 3.5e-76 290.0 473 35.1
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 4.6e-76 289.7 525 33.7
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 1.0e-75 288.5 511 34.4
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 1.5e-74 284.6 512 34.0
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 2.5e-74 283.9 507 34.9
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.6e-73 281.2 478 35.8
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 2.1e-73 280.8 475 34.3
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 2.8e-73 280.4 510 33.3
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 6.2e-73 279.3 458 36.0
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 1.4e-72 278.1 398 38.4
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 1.8e-72 277.7 477 36.3
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 4.0e-72 276.6 471 33.8
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 4.0e-72 276.6 527 33.8
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 4.0e-72 276.6 500 33.6
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 5.2e-72 276.2 475 34.5
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 1.5e-71 274.6 512 34.4
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 2.6e-71 273.9 473 34.2
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 4.4e-71 273.1 510 34.1
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 4.4e-71 273.1 513 34.5
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 4.9e-70 269.6 507 35.5
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 4.9e-70 269.6 513 34.3
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 6.4e-70 269.2 509 32.4
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 6.4e-70 269.2 469 33.0
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 8.3e-70 268.9 468 34.2
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 1.1e-69 268.5 564 33.0
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 1.1e-69 268.5 404 38.6
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 1.4e-69 268.1 509 34.8
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.4e-69 267.3 476 34.9
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 3.2e-69 266.9 397 38.3
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 4.1e-69 266.5 459 32.7
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 7.1e-69 265.8 512 31.4
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 9.2e-69 265.4 474 34.2
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.6e-68 264.6 475 33.5
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.6e-68 264.6 474 34.0
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.6e-68 263.1 478 32.6
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 6.0e-68 262.7 483 34.8
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 7.8e-68 262.3 484 33.5
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 1.0e-67 261.9 490 34.7
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 1.7e-67 261.2 469 31.8
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 5.1e-67 259.6 453 34.9
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 6.6e-67 259.2 465 31.8
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 6.6e-67 259.2 514 32.1
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 2.5e-66 257.3 520 31.9
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 2.5e-66 257.3 396 36.9
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.2e-65 255.0 403 36.5
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 1.6e-65 254.6 503 31.0
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 6.2e-65 252.7 404 36.6
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 2.4e-64 250.8 470 32.3
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 3.1e-64 250.4 507 32.3
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 5.2e-64 249.6 463 33.5
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 5.2e-64 249.6 435 33.1
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 8.9e-64 248.8 516 31.8
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 1.2e-63 248.4 507 31.8
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 1.5e-63 248.1 494 32.6
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 2.0e-63 247.7 425 34.8
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 1.3e-62 245.0 513 32.4
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 1.7e-62 244.6 506 31.2
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 2.9e-62 243.8 506 30.8
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 4.9e-62 243.0 525 33.0
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 6.4e-62 242.7 394 35.8
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 8.4e-62 242.3 475 33.7
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 8.4e-62 242.3 525 31.2
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.1e-61 241.9 396 35.9
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 1.1e-61 241.9 465 32.5
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.9e-61 241.1 471 32.9
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 3.5e-60 236.9 506 31.8
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 4.6e-60 236.5 363 36.6
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 3.0e-59 233.8 412 36.2
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 1.1e-58 231.9 528 29.7
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 7.3e-58 229.2 411 34.5
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 9.6e-58 228.8 334 35.6
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 8.1e-57 225.7 362 36.2
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.4e-56 224.9 546 29.7
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.8e-56 224.6 454 32.4
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 4.0e-56 223.4 561 28.7
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 6.9e-56 222.6 435 32.0
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 2.2e-54 217.6 469 29.9
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 2.9e-54 217.2 508 31.7
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 2.1e-52 211.1 366 35.0
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 1.3e-51 208.4 348 35.1
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 5.1e-51 206.5 330 37.3
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 4.3e-50 203.4 474 30.6
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 1.6e-49 201.4 399 33.8
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 3.1e-48 197.2 451 31.3
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 9.0e-48 195.7 536 27.6
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.5e-47 194.9 373 33.8
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.6e-47 194.1 277 37.2
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-45 188.3 379 34.6
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 8.7e-43 179.1 458 29.7
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 5.8e-39 166.4 291 33.7
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 6.0e-36 156.4 326 33.1
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 5.1e-35 153.3 255 32.5
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 4.8e-33 146.7 224 36.6
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.8e-33 146.7 257 31.9
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.4e-32 145.2 165 42.4
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 1.7e-30 138.3 269 31.6
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 1.2e-28 132.1 183 36.6
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 9.7e-26 122.5 196 34.7
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 3.1e-24 117.5 282 29.4
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.6e-20 105.1 219 32.0
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 1.4e-19 102.1 189 35.4
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 1.8e-19 101.7 142 41.5
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 8.2e-17 92.8 376 23.7
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.0e-15 88.2 163 30.1
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 9.4e-13 79.3 135 32.6
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 8.8e-11 72.8 115 34.8
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.5e-10 72.0 150 32.0
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 8.2e-09 66.2 55 52.7
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 2.6e-07 61.2 86 39.5
PRCOL_00007275 Prasinoderma coloniale HOM05D006389 ORTHO05D007863 2.6e-07 61.2 147 29.9
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 2.2e-06 58.2 100 35.0


User provided reference genes

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