Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 0.0e+00 2363.6 1222 100.0
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 1.9e-88 332.0 742 33.4
AagrBONN_evm.TU.Sc2ySwM_344.1123 Anthoceros agrestis HOM05D006201 ORTHO05D007178 5.4e-75 287.3 404 41.8
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 3.7e-68 264.6 841 27.9
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 2.4e-67 261.9 814 28.6
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 7.0e-67 260.4 837 29.4
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 1.6e-66 259.2 827 27.7
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 3.5e-66 258.1 835 28.6
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 1.3e-65 256.1 839 28.4
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 2.5e-64 251.9 823 26.9
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 3.3e-64 251.5 835 29.2
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 5.6e-64 250.8 816 28.2
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 1.8e-62 245.7 833 28.1
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 1.8e-62 245.7 848 27.0
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 2.3e-62 245.4 827 27.8
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 4.0e-62 244.6 825 26.1
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 1.2e-61 243.0 822 28.0
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 1.5e-61 242.7 841 27.8
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 7.5e-61 240.4 823 28.2
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 1.7e-60 239.2 829 28.3
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 8.3e-60 236.9 825 26.8
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 1.1e-59 236.5 852 27.0
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 1.4e-59 236.1 832 27.3
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 1.4e-59 236.1 754 26.7
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 1.4e-59 236.1 839 28.1
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 2.4e-59 235.3 839 27.3
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 9.2e-59 233.4 828 27.2
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 2.7e-58 231.9 824 27.5
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 1.0e-57 229.9 846 27.3
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 1.0e-57 229.9 841 27.0
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 1.3e-57 229.6 835 26.8
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 2.5e-56 225.3 826 26.3
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 3.3e-56 224.9 841 26.9
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.8e-55 221.9 831 27.3
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 3.6e-55 221.5 831 27.2
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 8.0e-55 220.3 823 27.7
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 8.0e-55 220.3 830 27.3
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 1.4e-54 219.5 753 27.4
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 4.0e-54 218.0 822 25.9
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 1.5e-53 216.1 827 25.6
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 2.6e-53 215.3 835 27.1
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 4.9e-52 211.1 835 26.8
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 1.1e-51 209.9 832 26.0
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 1.4e-51 209.5 761 27.3
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 5.4e-51 207.6 824 25.4
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 1.6e-50 206.1 830 26.7
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 6.0e-50 204.1 834 24.6
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 1.3e-49 203.0 825 26.5
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 1.3e-49 203.0 847 24.3
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 3.0e-49 201.8 827 25.6
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 6.6e-49 200.7 837 25.4
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 2.5e-48 198.7 824 25.2
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 2.5e-48 198.7 831 26.2
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 2.5e-48 198.7 849 25.3
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 3.3e-48 198.4 822 25.4
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 4.3e-48 198.0 678 26.0
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 9.5e-48 196.8 822 25.4
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 4.7e-47 194.5 687 26.2
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 4.7e-47 194.5 827 23.8
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 6.2e-47 194.1 831 26.0
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 1.4e-46 193.0 829 25.8
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 3.1e-46 191.8 824 24.9
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 4.0e-46 191.4 750 27.7
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 5.2e-46 191.0 878 26.1
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 2.0e-45 189.1 827 24.2
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.4e-45 188.3 831 24.1
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 5.8e-45 187.6 835 24.1
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 1.3e-44 186.4 821 25.2
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 1.3e-44 186.4 823 23.7
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 2.2e-44 185.7 708 27.4
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 3.7e-44 184.9 822 23.7
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 6.4e-44 184.1 832 25.6
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 1.4e-43 183.0 662 27.2
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 1.9e-43 182.6 821 24.6
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.4e-43 182.2 832 25.5
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 3.2e-43 181.8 826 25.2
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 4.1e-43 181.4 337 35.3
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 9.2e-43 180.3 826 24.9
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.5e-42 178.3 838 23.6
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 4.6e-42 177.9 389 32.1
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 7.8e-42 177.2 413 31.7
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 3.0e-41 175.3 736 26.2
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 6.2e-39 167.5 425 29.6
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 6.2e-39 167.5 867 25.5
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 1.8e-38 166.0 742 26.3
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 3.1e-38 165.2 347 32.0
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 1.5e-37 162.9 322 34.8
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 1.5e-37 162.9 348 31.6
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 2.6e-37 162.2 379 31.7
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.8e-36 158.3 858 23.1
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 7.1e-35 154.1 237 38.4
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 1.6e-34 152.9 766 22.1
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 1.0e-33 150.2 808 24.0
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 1.7e-33 149.4 366 31.4
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 1.9e-32 146.0 357 28.3
SMO351G0194 Selaginella moellendorffii HOM05D006201 ORTHO05D007178 1.6e-31 142.9 530 26.0
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 4.9e-28 131.3 597 22.8
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 4.8e-23 114.8 862 23.2
CBR_g8780 Chara braunii HOM05D006201 ORTHO05D007178 1.4e-22 113.2 317 28.1
Potri.016G127500 Populus trichocarpa HOM05D006201 ORTHO05D007178 6.4e-20 104.4 528 24.4
Dinv12170 Davidia involucrata HOM05D006201 ORTHO05D007178 8.4e-20 104.0 231 35.5
Hund14937 Selenicereus undatus HOM05D006201 ORTHO05D007178 1.9e-19 102.8 243 31.3
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 1.8e-17 96.3 268 31.0
SEGI_30477 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 1.8e-17 96.3 500 24.4
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 2.4e-14 85.9 290 27.6
Rhsim05G0226000 Rhododendron simsii HOM05D006201 ORTHO05D007178 5.3e-14 84.7 401 24.9
AagrBONN_evm.TU.Sc2ySwM_228.3488 Anthoceros agrestis HOM05D006201 ORTHO05D007178 1.3e-12 80.1 142 34.5
CANSAT64G1736 Cannabis sativa HOM05D006201 ORTHO05D007178 6.4e-12 77.8 123 37.4
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 1.1e-11 77.0 359 25.6
Hma1.2p1_0479F.1_g161690 Hydrangea macrophylla HOM05D006201 ORTHO05D007178 7.1e-11 74.3 257 26.5
ATR0605G310 Amborella trichopoda HOM05D006201 ORTHO05D007178 1.6e-10 73.2 357 25.8
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 4.6e-10 71.6 292 24.3
Hund14942 Selenicereus undatus HOM05D006201 ORTHO05D007178 6.7e-09 67.8 330 24.8


User provided reference genes

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