Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 0.0e+00 1421.4 718 100.0
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 7.6e-130 468.8 712 41.6
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 7.6e-122 442.2 700 40.9
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 7.2e-112 409.1 706 37.8
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 4.5e-98 363.2 718 35.5
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 5.9e-98 362.8 715 35.5
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 3.8e-97 360.1 715 35.7
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 1.1e-96 358.6 719 36.0
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 5.5e-96 356.3 714 34.9
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 1.2e-95 355.1 715 34.8
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 4.7e-95 353.2 713 35.5
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 8.8e-94 349.0 722 34.8
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 1.2e-93 348.6 714 34.7
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 2.6e-93 347.4 714 34.0
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 4.4e-93 346.7 720 34.0
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 5.7e-93 346.3 720 34.2
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 7.5e-93 345.9 714 34.0
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 9.7e-93 345.5 715 34.5
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 1.7e-92 344.7 718 34.1
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 3.7e-92 343.6 719 33.1
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 3.7e-92 343.6 721 34.7
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 4.8e-92 343.2 715 32.9
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 4.8e-92 343.2 667 35.8
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 1.8e-91 341.3 717 35.1
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 4.1e-91 340.1 729 35.1
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 4.1e-91 340.1 715 34.4
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 2.7e-90 337.4 712 33.7
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 5.9e-90 336.3 712 34.1
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 1.3e-89 335.1 713 33.5
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.3e-89 335.1 727 33.0
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 2.2e-89 334.3 715 33.7
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 3.8e-89 333.6 711 33.2
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 3.8e-89 333.6 721 32.5
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 3.8e-89 333.6 723 33.5
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 3.8e-89 333.6 718 34.5
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 3.2e-88 330.5 708 32.2
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 3.2e-88 330.5 725 33.1
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 4.2e-88 330.1 720 33.5
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 4.2e-88 330.1 717 32.4
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 7.2e-88 329.3 737 33.2
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 7.2e-88 329.3 737 33.2
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 9.4e-88 328.9 730 32.3
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 9.4e-88 328.9 720 33.2
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.2e-87 328.6 730 33.0
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 1.6e-87 328.2 722 32.3
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 1.6e-87 328.2 712 32.0
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 2.1e-87 327.8 719 32.8
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 2.1e-87 327.8 712 32.4
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 2.1e-87 327.8 720 33.2
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 3.6e-87 327.0 717 33.5
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 3.6e-87 327.0 715 32.7
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 3.6e-87 327.0 717 33.3
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 8.0e-87 325.9 717 33.3
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 1.0e-86 325.5 714 31.8
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 1.0e-86 325.5 713 33.9
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 1.0e-86 325.5 720 32.4
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 1.2e-85 322.0 723 33.2
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.5e-85 321.6 723 33.3
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 2.6e-85 320.9 725 31.7
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 3.4e-85 320.5 714 33.8
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 3.4e-85 320.5 716 32.8
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 4.4e-85 320.1 712 33.8
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 9.8e-85 318.9 726 31.4
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 9.8e-85 318.9 719 32.4
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 1.7e-84 318.2 717 32.6
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 2.8e-84 317.4 718 32.5
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 1.4e-83 315.1 718 31.8
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 2.4e-83 314.3 675 33.3
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 5.4e-83 313.2 675 32.7
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 5.4e-83 313.2 693 32.9
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 7.0e-83 312.8 743 31.9
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 1.2e-82 312.0 707 32.4
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 1.2e-82 312.0 716 31.7
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 2.0e-82 311.2 715 32.0
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 5.9e-82 309.7 724 32.3
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.7e-81 308.1 672 33.9
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 2.3e-81 307.8 724 32.7
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 2.9e-81 307.4 695 32.4
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 3.8e-81 307.0 716 32.0
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 3.8e-81 307.0 509 41.8
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 8.6e-81 305.8 708 31.8
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 1.9e-80 304.7 720 31.7
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 4.2e-80 303.5 708 31.2
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 4.2e-80 303.5 717 30.5
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 5.5e-80 303.1 721 31.6
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 7.2e-80 302.8 714 31.5
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 1.2e-79 302.0 707 31.7
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 1.2e-79 302.0 712 32.0
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 2.8e-79 300.8 707 32.1
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 3.6e-79 300.4 716 31.8
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 4.7e-79 300.1 708 30.8
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 6.1e-79 299.7 708 31.1
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 1.0e-78 298.9 639 34.1
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 1.4e-78 298.5 707 31.8
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 5.7e-77 293.1 718 31.9
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 7.5e-77 292.7 723 31.3
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 2.2e-76 291.2 708 30.4
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 2.2e-76 291.2 807 29.4
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 4.9e-76 290.0 721 32.0
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 6.3e-76 289.7 803 29.5
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.4e-70 271.9 723 30.8
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 2.7e-66 257.7 979 26.4
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 2.8e-63 247.7 607 31.6
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 7.3e-56 223.0 737 28.5
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 3.1e-54 217.6 592 30.1
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 1.2e-50 205.7 715 27.1
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 2.3e-49 201.4 579 29.9
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 1.1e-46 192.6 568 29.2
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 5.2e-46 190.3 747 26.5
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 1.5e-40 172.2 312 38.1
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 2.3e-33 148.3 348 33.3
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.1e-31 141.7 162 46.9
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 1.4e-27 129.0 286 35.7
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 5.4e-27 127.1 593 24.6
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 5.3e-22 110.5 139 42.4
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 2.9e-20 104.8 134 44.8
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 5.1e-17 94.0 160 40.0
Pp3c19_8370 Physcomitrium patens HOM05D005966 ORTHO05D007584 4.0e-14 84.3 109 43.1
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 9.3e-11 73.2 98 41.8
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 1.0e-09 69.7 148 28.4
CBR_g48371 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-09 68.9 283 27.9
CDE11G0857 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 7.4e-08 63.5 65 50.8
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 8.2e-07 60.1 47 55.3
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 9.0e-06 56.6 57 49.1


User provided reference genes

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