Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 1.9e-203 712.2 343 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 4.1e-49 199.5 305 37.0
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 7.8e-48 195.3 290 38.3
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 1.4e-36 157.9 305 34.1
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.1e-33 148.3 330 30.0
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 2.1e-32 144.1 317 30.3
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 6.0e-32 142.5 298 30.9
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 7.8e-32 142.1 309 31.4
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 7.8e-32 142.1 290 33.8
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.3e-31 141.4 297 31.0
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.7e-31 141.0 311 31.8
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 5.1e-31 139.4 298 30.2
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 6.6e-31 139.0 298 30.2
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 1.5e-30 137.9 287 29.3
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 5.6e-30 136.0 307 30.0
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.2e-29 134.8 310 30.3
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 2.1e-29 134.0 291 29.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 2.8e-29 133.7 291 30.9
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 4.7e-29 132.9 310 30.0
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 1.1e-28 131.7 294 28.9
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 1.1e-28 131.7 302 30.5
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 1.4e-28 131.3 319 29.5
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 2.4e-28 130.6 318 29.2
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 4.0e-28 129.8 313 30.7
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 8.9e-28 128.6 317 30.0
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.5e-27 127.9 318 29.9
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 2.0e-27 127.5 293 30.4
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 2.6e-27 127.1 315 27.9
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 3.4e-27 126.7 329 28.9
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 4.4e-27 126.3 317 29.3
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 4.4e-27 126.3 320 28.1
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 5.8e-27 125.9 288 29.5
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 7.6e-27 125.6 331 30.5
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 7.6e-27 125.6 294 29.3
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.9e-27 125.2 293 30.4
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 9.9e-27 125.2 288 29.5
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 9.9e-27 125.2 290 29.3
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.3e-26 124.8 303 31.0
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 1.3e-26 124.8 321 28.7
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.7e-26 124.4 289 30.1
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 2.2e-26 124.0 304 28.0
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 2.9e-26 123.6 319 28.2
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 6.4e-26 122.5 300 28.0
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 6.4e-26 122.5 290 29.7
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 8.4e-26 122.1 288 28.8
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 8.4e-26 122.1 303 29.7
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-25 121.7 293 30.0
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 1.4e-25 121.3 287 28.9
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 1.4e-25 121.3 310 28.4
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 1.4e-25 121.3 292 25.7
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 1.9e-25 120.9 327 27.8
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 2.4e-25 120.6 306 27.8
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 5.4e-25 119.4 309 29.8
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 5.4e-25 119.4 288 26.7
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.2e-24 118.2 293 28.0
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 4.6e-24 116.3 319 27.0
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 6.0e-24 115.9 296 29.4
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.7e-23 114.4 353 26.6
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 3.0e-23 113.6 294 26.5
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 3.9e-23 113.2 294 25.9
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 3.9e-23 113.2 294 25.2
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 2.5e-22 110.5 289 26.6
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 2.5e-22 110.5 290 27.9
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 4.3e-22 109.8 307 27.0
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 5.6e-22 109.4 190 32.6
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 1.3e-21 108.2 199 32.2
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 2.1e-21 107.5 281 27.0
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 6.2e-21 105.9 257 29.6
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.1e-20 105.1 298 29.5
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.4e-20 104.8 291 27.5
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 4.0e-20 103.2 288 27.4
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 1.2e-19 101.7 303 28.4
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 5.8e-19 99.4 200 32.0
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 7.6e-19 99.0 226 29.2
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 1.3e-18 98.2 409 23.2
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.7e-18 97.8 273 28.2
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 2.9e-18 97.1 186 31.7
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 4.9e-18 96.3 133 39.8
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 8.4e-18 95.5 190 31.1
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 7.1e-17 92.4 303 26.4
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.6e-16 91.3 302 27.5
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 3.5e-16 90.1 192 30.2
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 3.5e-16 90.1 160 32.5
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-13 81.6 160 32.5
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 5.3e-12 76.3 262 28.2
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.3e-12 76.3 262 28.2
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 9.0e-12 75.5 259 28.6
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.2e-11 75.1 148 27.0
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 1.3e-10 71.6 97 35.1
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 1.6e-08 64.7 144 30.6
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 1.3e-07 61.6 235 22.6
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 2.3e-07 60.8 140 30.0
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 6.7e-07 59.3 110 29.1
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 5.6e-06 56.2 242 23.1
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 5.6e-06 56.2 264 24.2


User provided reference genes

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