Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 1.0e-94 350.1 187 100.0
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 2.0e-50 203.0 197 62.9
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 1.9e-48 196.4 119 82.4
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 3.2e-48 195.7 197 59.9
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.4e-46 190.3 202 61.4
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 1.2e-42 177.2 111 78.4
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 2.7e-42 176.0 124 70.2
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 2.7e-42 176.0 146 64.4
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 2.7e-42 176.0 146 64.4
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 4.5e-42 175.3 104 79.8
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 4.5e-42 175.3 104 79.8
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 4.5e-42 175.3 104 79.8
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 4.5e-42 175.3 100 83.0
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 4.5e-42 175.3 119 73.1
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 4.5e-42 175.3 104 79.8
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 4.5e-42 175.3 132 67.4
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 4.5e-42 175.3 200 52.5
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 4.5e-42 175.3 119 73.1
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 5.9e-42 174.9 202 53.0
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 5.9e-42 174.9 100 82.0
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 7.7e-42 174.5 119 72.3
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 7.7e-42 174.5 100 82.0
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 7.7e-42 174.5 119 72.3
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 7.7e-42 174.5 116 75.0
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 7.7e-42 174.5 115 72.2
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 1.0e-41 174.1 138 63.8
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 1.0e-41 174.1 117 72.6
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 1.0e-41 174.1 111 76.6
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 1.0e-41 174.1 199 52.8
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 1.3e-41 173.7 100 81.0
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 1.3e-41 173.7 100 81.0
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 1.3e-41 173.7 100 81.0
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 1.3e-41 173.7 100 81.0
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 1.3e-41 173.7 138 64.5
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 1.3e-41 173.7 123 71.5
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 1.7e-41 173.3 100 81.0
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 2.3e-41 172.9 111 76.6
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 2.3e-41 172.9 104 78.8
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 2.3e-41 172.9 129 67.4
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 2.3e-41 172.9 110 76.4
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 2.3e-41 172.9 111 76.6
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.3e-41 172.9 197 51.3
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 2.9e-41 172.6 116 74.1
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 3.8e-41 172.2 115 73.9
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 3.8e-41 172.2 100 81.0
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 3.8e-41 172.2 111 75.7
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 3.8e-41 172.2 139 65.5
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 6.6e-41 171.4 115 73.0
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 6.6e-41 171.4 100 80.0
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 6.6e-41 171.4 100 80.0
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 6.6e-41 171.4 100 80.0
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 6.6e-41 171.4 106 77.4
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 6.6e-41 171.4 106 77.4
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 6.6e-41 171.4 111 75.7
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 6.6e-41 171.4 100 81.0
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 8.6e-41 171.0 119 72.3
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 8.6e-41 171.0 144 61.1
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.1e-40 170.6 111 74.8
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 1.1e-40 170.6 111 75.7
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 1.1e-40 170.6 103 78.6
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 1.5e-40 170.2 194 53.6
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 1.5e-40 170.2 123 68.3
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 1.5e-40 170.2 100 80.0
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 1.5e-40 170.2 157 61.8
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 1.5e-40 170.2 133 65.4
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.9e-40 169.9 101 78.2
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 1.9e-40 169.9 100 80.0
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.9e-40 169.9 100 80.0
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.9e-40 169.9 100 80.0
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.9e-40 169.9 100 80.0
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.9e-40 169.9 100 80.0
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 1.9e-40 169.9 100 80.0
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 1.9e-40 169.9 115 72.2
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 2.5e-40 169.5 111 74.8
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 2.5e-40 169.5 100 81.0
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 2.5e-40 169.5 187 54.5
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 2.5e-40 169.5 123 69.1
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 2.5e-40 169.5 115 72.2
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 2.5e-40 169.5 154 59.1
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 2.5e-40 169.5 113 73.5
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 3.3e-40 169.1 101 77.2
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 3.3e-40 169.1 193 52.3
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 3.3e-40 169.1 100 79.0
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 3.3e-40 169.1 103 76.7
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 4.3e-40 168.7 192 51.6
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 4.3e-40 168.7 194 51.5
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 4.3e-40 168.7 182 52.7
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 4.3e-40 168.7 201 53.7
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 5.6e-40 168.3 193 51.8
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 5.6e-40 168.3 174 56.9
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 5.6e-40 168.3 111 74.8
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 7.2e-40 167.9 202 52.0
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 7.2e-40 167.9 202 52.0
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 7.2e-40 167.9 202 52.0
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 7.2e-40 167.9 100 79.0
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 7.2e-40 167.9 138 64.5
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 7.2e-40 167.9 138 64.5
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 7.2e-40 167.9 138 64.5
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 7.2e-40 167.9 115 71.3
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 7.2e-40 167.9 100 80.0
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 9.5e-40 167.5 198 52.5
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 9.5e-40 167.5 109 74.3
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 9.5e-40 167.5 137 62.8
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 1.2e-39 167.2 199 51.8
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 1.2e-39 167.2 100 78.0
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 1.2e-39 167.2 103 76.7
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 1.2e-39 167.2 103 76.7
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 1.2e-39 167.2 103 76.7
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 1.2e-39 167.2 103 76.7
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 1.6e-39 166.8 194 53.6
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 1.6e-39 166.8 115 70.4
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 2.1e-39 166.4 165 57.6
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 2.8e-39 166.0 194 53.6
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 2.8e-39 166.0 103 76.7
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 2.8e-39 166.0 103 76.7
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 2.8e-39 166.0 194 52.6
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 2.8e-39 166.0 106 75.5
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 3.6e-39 165.6 193 54.4
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 3.6e-39 165.6 193 51.3
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 4.7e-39 165.2 198 52.5
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 4.7e-39 165.2 193 54.4
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 4.7e-39 165.2 193 54.4
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 6.1e-39 164.9 158 60.1
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 6.1e-39 164.9 198 52.0
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 6.1e-39 164.9 198 52.0
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 6.1e-39 164.9 188 51.6
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 6.1e-39 164.9 113 73.5
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 6.1e-39 164.9 115 70.4
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.0e-38 164.1 161 57.1
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 1.8e-38 163.3 116 70.7
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 2.3e-38 162.9 199 52.8
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 3.0e-38 162.5 99 75.8
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 4.0e-38 162.2 100 74.0
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 4.0e-38 162.2 194 52.6
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 4.0e-38 162.2 190 53.2
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 8.9e-38 161.0 182 53.3
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 5.7e-37 158.3 196 51.0
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 7.5e-37 157.9 202 48.5
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 1.3e-36 157.1 131 61.8
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 2.2e-36 156.4 115 67.8
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 6.4e-36 154.8 117 67.5
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 1.8e-35 153.3 97 72.2
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 3.2e-35 152.5 100 75.0
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 7.0e-35 151.4 100 69.0
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 5.6e-32 141.7 143 55.2
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 5.2e-30 135.2 98 63.3
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 1.7e-25 120.2 100 57.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 9.5e-24 114.4 118 49.2
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 1.7e-20 103.6 59 76.3
Cre16.g660150 Chlamydomonas reinhardtii HOM05D001946 ORTHO05D002111 7.3e-08 61.6 114 33.3
Aqoxy5G01460 Aquilegia oxysepala HOM05D001946 ORTHO05D002111 2.1e-07 60.1 111 33.3
MCO07G048 Micromonas commoda HOM05D001946 ORTHO05D002111 3.6e-07 59.3 104 33.7
CBR_g20003 Chara braunii HOM05D001946 ORTHO05D002111 3.1e-06 56.2 100 32.0
Mapoly0158s0015 Marchantia polymorpha HOM05D001946 ORTHO05D002111 3.1e-06 56.2 105 30.5
Mapoly0158s0031 Marchantia polymorpha HOM05D001946 ORTHO05D002111 3.1e-06 56.2 105 30.5
PRCOL_00002469 Prasinoderma coloniale HOM05D001946 ORTHO05D002111 3.1e-06 56.2 107 32.7


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