Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0009s0070 Marchantia polymorpha HOM05D005833 ORTHO05D008135 0.0e+00 1362.8 893 100.0
Pp3c11_2930 Physcomitrium patens HOM05D005833 ORTHO05D008135 1.6e-92 345.1 845 42.0
AagrBONN_evm.TU.Sc2ySwM_117.1478 Anthoceros agrestis HOM05D005833 ORTHO05D008135 4.2e-61 240.7 486 33.5
CBR_g11913 Chara braunii HOM05D005833 ORTHO05D008135 6.7e-59 233.4 681 26.9
SMO230G0024 Selaginella moellendorffii HOM05D005833 ORTHO05D008135 5.1e-51 207.2 811 32.1
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 2.0e-50 205.3 641 25.0
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 6.5e-46 190.3 595 27.6
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 5.5e-45 187.2 594 26.4
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 1.8e-43 182.2 594 27.1
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 5.2e-43 180.6 594 24.9
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 8.8e-43 179.9 597 26.5
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.5e-42 179.1 595 26.2
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 9.7e-42 176.4 595 26.1
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 1.3e-41 176.0 597 25.3
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 4.8e-41 174.1 609 26.3
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 7.0e-40 170.2 594 25.9
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 9.1e-40 169.9 588 26.5
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 1.6e-39 169.1 593 25.6
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 2.0e-39 168.7 596 25.8
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 3.5e-39 167.9 574 26.8
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 3.5e-39 167.9 608 25.3
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 7.7e-39 166.8 591 26.1
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 1.3e-38 166.0 596 25.5
DCAR_009531 Daucus carota HOM05D004428 ORTHO05D006381 3.8e-38 164.5 593 25.3
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 8.5e-38 163.3 633 25.4
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 8.5e-38 163.3 594 25.9
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 1.1e-37 162.9 597 25.6
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 1.9e-37 162.2 632 25.2
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 3.2e-37 161.4 591 24.7
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 3.2e-37 161.4 602 25.2
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 4.2e-37 161.0 594 24.9
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 4.2e-37 161.0 622 24.4
Hma1.2p1_1100F.1_g257040 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 5.5e-37 160.6 609 24.0
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 5.5e-37 160.6 598 24.1
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 7.2e-37 160.2 630 25.4
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 2.1e-36 158.7 603 23.9
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 3.6e-36 157.9 594 24.1
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 4.7e-36 157.5 673 23.6
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 8.0e-36 156.8 596 24.8
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 1.8e-35 155.6 591 25.4
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 3.0e-35 154.8 594 24.9
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 5.2e-35 154.1 595 25.9
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 5.2e-35 154.1 565 25.7
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 5.2e-35 154.1 594 23.9
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 6.8e-35 153.7 569 25.7
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 1.2e-34 152.9 591 23.7
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 1.5e-34 152.5 594 24.1
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 2.0e-34 152.1 594 24.4
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 2.6e-34 151.8 599 23.4
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 2.6e-34 151.8 594 24.2
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 3.4e-34 151.4 600 25.2
Gohir.D01G092700 Gossypium hirsutum HOM05D005833 ORTHO05D008135 4.4e-34 151.0 574 25.4
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 7.5e-34 150.2 596 23.7
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 7.5e-34 150.2 600 26.0
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 9.8e-34 149.8 594 24.2
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 1.3e-33 149.4 594 24.1
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 1.7e-33 149.1 598 24.7
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 2.8e-33 148.3 594 23.6
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 3.7e-33 147.9 599 22.4
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 4.8e-33 147.5 626 24.9
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 6.3e-33 147.1 599 23.7
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 8.3e-33 146.7 594 24.6
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 8.3e-33 146.7 596 24.2
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 1.4e-32 146.0 603 23.5
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 1.8e-32 145.6 601 22.5
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 1.8e-32 145.6 599 24.5
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 2.4e-32 145.2 603 23.9
Sed0015348 Sechium edule HOM05D005833 ORTHO05D008135 2.4e-32 145.2 603 24.0
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 5.4e-32 144.1 592 23.3
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 5.4e-32 144.1 599 25.2
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 9.1e-32 143.3 594 23.9
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 1.2e-31 142.9 563 23.6
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 1.2e-31 142.9 594 23.7
BcaC08g47270 Brassica carinata HOM05D005833 ORTHO05D008135 1.6e-31 142.5 593 22.8
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 4.5e-31 141.0 629 23.8
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 1.0e-30 139.8 611 23.2
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 2.2e-30 138.7 639 23.6
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 6.5e-30 137.1 596 22.5
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 1.5e-29 136.0 596 22.5
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 1.5e-29 136.0 596 24.2
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 2.5e-29 135.2 608 22.5
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 2.5e-29 135.2 595 23.9
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 3.2e-29 134.8 605 23.5
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 4.2e-29 134.4 597 23.6
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 4.2e-29 134.4 597 23.6
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 5.5e-29 134.0 628 23.2
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 1.2e-28 132.9 594 23.1
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 1.2e-28 132.9 588 24.0
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 4.7e-28 131.0 614 23.3
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 3.0e-27 128.3 634 24.3
SalBow6G3625 Salvia bowleyana HOM05D005833 ORTHO05D008135 2.6e-26 125.2 579 23.3
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 1.2e-23 116.3 550 22.5
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 7.7e-23 113.6 603 21.6
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 9.5e-21 106.7 470 23.6
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 1.2e-20 106.3 474 23.8
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 1.8e-19 102.4 641 21.5
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 1.8e-19 102.4 165 36.4
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 2.9e-17 95.1 159 34.0
AT1G76280 Arabidopsis thaliana HOM05D005833 ORTHO05D008135 4.9e-17 94.4 271 25.8
AUR62036881 Chenopodium quinoa HOM05D005833 ORTHO05D008135 1.8e-16 92.4 581 21.3
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 3.5e-15 88.2 182 32.4
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 5.9e-15 87.4 162 30.9
BcaC08g47127 Brassica carinata HOM05D005833 ORTHO05D008135 3.9e-14 84.7 207 26.6
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 1.0e-11 76.6 144 32.6
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 3.4e-10 71.6 149 32.2
Glyma.14G222150 Glycine max HOM05D005833 ORTHO05D008135 2.2e-09 68.9 90 40.0
AagrBONN_evm.TU.Sc2ySwM_344.4894__4895 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.1e-08 64.7 183 26.2
Medtr1g026340 Medicago truncatula HOM05D005833 ORTHO05D008135 4.6e-07 61.2 147 29.3
Medtr1g026460 Medicago truncatula HOM05D005833 ORTHO05D008135 4.6e-07 61.2 147 29.3
Lj8P589T22 Lonicera japonica HOM05D005833 ORTHO05D008135 6.6e-06 57.4 131 32.8


User provided reference genes

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