Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 1.5e-107 392.9 206 100.0
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 1.3e-45 187.2 187 56.7
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 2.4e-44 183.0 169 55.6
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 2.7e-43 179.5 173 57.2
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 1.3e-42 177.2 173 56.6
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 3.8e-42 175.6 152 58.6
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 6.5e-42 174.9 143 63.6
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 6.5e-42 174.9 136 64.0
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.9e-41 173.3 143 61.5
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 3.2e-41 172.6 143 62.2
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 4.2e-41 172.2 161 57.1
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 4.2e-41 172.2 181 55.8
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 5.5e-41 171.8 173 54.3
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 7.2e-41 171.4 143 61.5
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 7.2e-41 171.4 178 53.9
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 9.4e-41 171.0 143 60.8
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 9.4e-41 171.0 147 61.2
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 1.6e-40 170.2 143 62.9
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 1.6e-40 170.2 167 56.3
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 2.7e-40 169.5 152 58.6
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 8.0e-40 167.9 169 55.6
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 1.0e-39 167.5 167 55.1
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 1.0e-39 167.5 135 63.0
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 1.4e-39 167.2 176 53.4
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 1.8e-39 166.8 143 59.4
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 1.8e-39 166.8 134 63.4
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 2.3e-39 166.4 174 53.4
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 2.3e-39 166.4 142 60.6
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 3.0e-39 166.0 173 52.6
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 4.0e-39 165.6 165 54.5
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 4.0e-39 165.6 173 53.2
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 4.0e-39 165.6 136 61.0
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.5e-38 163.7 171 55.0
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.5e-38 163.7 171 55.0
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 1.5e-38 163.7 173 52.6
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.5e-38 163.7 173 52.0
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.5e-38 163.7 137 62.0
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 2.0e-38 163.3 173 52.6
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 2.6e-38 162.9 140 60.0
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 3.4e-38 162.5 170 52.4
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 3.4e-38 162.5 143 57.3
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 3.4e-38 162.5 176 51.7
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 3.4e-38 162.5 167 53.3
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 5.7e-38 161.8 174 50.0
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 5.7e-38 161.8 135 62.2
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 9.8e-38 161.0 173 52.0
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.7e-37 160.2 131 62.6
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 2.8e-37 159.5 179 51.4
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 2.8e-37 159.5 172 51.7
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 2.8e-37 159.5 178 52.2
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 3.7e-37 159.1 171 52.0
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 3.7e-37 159.1 172 52.9
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 3.7e-37 159.1 134 61.9
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 4.8e-37 158.7 173 52.0
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 4.8e-37 158.7 127 63.8
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 8.3e-37 157.9 131 61.8
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 8.3e-37 157.9 165 54.5
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 8.3e-37 157.9 130 61.5
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 1.8e-36 156.8 169 53.3
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 1.8e-36 156.8 178 49.4
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 4.1e-36 155.6 136 60.3
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 4.1e-36 155.6 175 53.1
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 5.4e-36 155.2 174 51.7
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 5.4e-36 155.2 174 51.7
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 9.1e-36 154.5 144 56.9
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 9.1e-36 154.5 144 57.6
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 9.1e-36 154.5 134 58.2
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 1.2e-35 154.1 151 53.6
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 1.6e-35 153.7 137 57.7
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 1.6e-35 153.7 133 58.6
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.6e-35 153.7 164 52.4
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 2.0e-35 153.3 174 51.7
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 2.0e-35 153.3 177 50.8
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 2.7e-35 152.9 136 58.1
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 2.7e-35 152.9 176 48.3
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 2.7e-35 152.9 175 52.0
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 4.5e-35 152.1 151 55.0
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 4.5e-35 152.1 144 56.9
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 5.9e-35 151.8 173 48.0
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 5.9e-35 151.8 145 54.5
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 7.7e-35 151.4 173 47.4
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 7.7e-35 151.4 144 56.9
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 1.3e-34 150.6 156 53.8
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 1.3e-34 150.6 173 47.4
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.7e-34 150.2 137 61.3
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 2.3e-34 149.8 173 48.0
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 2.9e-34 149.4 129 58.9
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 3.8e-34 149.1 135 60.7
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 5.0e-34 148.7 139 56.8
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 5.0e-34 148.7 137 56.2
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 5.0e-34 148.7 137 56.2
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 5.0e-34 148.7 162 51.9
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 6.5e-34 148.3 168 50.0
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 6.5e-34 148.3 148 54.7
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 8.6e-34 147.9 137 56.9
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 8.6e-34 147.9 174 48.9
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 1.1e-33 147.5 137 56.9
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 1.1e-33 147.5 165 51.5
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 1.5e-33 147.1 119 63.9
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 2.5e-33 146.4 137 56.2
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 2.5e-33 146.4 136 56.6
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 5.5e-33 145.2 122 59.8
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 2.1e-32 143.3 118 58.5
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 4.7e-32 142.1 123 57.7
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 1.4e-31 140.6 107 62.6
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 1.4e-31 140.6 108 64.8
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 1.8e-31 140.2 151 53.0
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 5.2e-31 138.7 115 60.0
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 6.8e-31 138.3 162 51.2
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 1.3e-29 134.0 137 53.3
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 2.8e-29 132.9 129 54.3
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 2.8e-29 132.9 114 57.9
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 1.1e-28 131.0 100 61.0
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 2.7e-27 126.3 176 42.6
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 3.5e-27 125.9 111 55.9
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 8.6e-26 121.3 162 45.1
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 1.9e-25 120.2 178 43.3
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 2.5e-25 119.8 159 47.2
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 5.6e-25 118.6 167 42.5
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.4e-23 114.0 137 45.3
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-22 109.8 140 47.1
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 9.8e-22 107.8 167 40.1
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 8.3e-21 104.8 114 50.0
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 1.6e-19 100.5 124 49.2
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 4.3e-17 92.4 115 45.2
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 3.7e-13 79.3 82 51.2
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.4e-12 77.4 87 47.1
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 4.6e-11 72.4 54 59.3
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 7.3e-09 65.1 64 57.8
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 7.3e-09 65.1 50 60.0
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 8.1e-08 61.6 103 41.7
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 2.6e-06 56.6 155 30.3


User provided reference genes

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