Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.6e-152 542.7 279 100.0
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 4.5e-102 375.2 277 69.3
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.3e-93 347.1 277 61.7
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 3.2e-92 342.4 277 62.5
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 4.2e-92 342.0 277 61.4
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 5.5e-92 341.7 282 63.5
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.7e-91 339.3 277 61.4
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 2.7e-91 339.3 277 61.4
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 2.7e-91 339.3 277 61.4
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.0e-90 337.4 277 60.6
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.3e-90 336.3 277 60.6
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 2.3e-90 336.3 277 62.1
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 3.0e-90 335.9 277 61.0
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 3.0e-90 335.9 277 61.0
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.0e-90 335.9 277 61.0
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 6.7e-90 334.7 277 61.7
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 8.7e-90 334.3 277 59.6
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 8.7e-90 334.3 277 61.4
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.1e-89 334.0 277 61.0
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.1e-89 334.0 277 61.0
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.5e-89 333.6 277 61.0
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.5e-89 333.6 277 61.7
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.5e-89 332.8 277 59.9
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.5e-89 332.8 277 59.9
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.5e-89 332.8 280 60.4
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 4.3e-89 332.0 277 61.4
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 7.4e-89 331.3 280 60.4
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 1.6e-88 330.1 277 59.9
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.6e-88 330.1 277 59.6
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 2.1e-88 329.7 277 60.6
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 2.1e-88 329.7 280 60.4
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 3.7e-88 328.9 280 60.4
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 4.8e-88 328.6 277 58.1
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 6.3e-88 328.2 277 59.6
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 6.3e-88 328.2 277 59.6
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 8.2e-88 327.8 277 60.6
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.4e-87 327.0 277 59.6
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.4e-87 327.0 277 59.2
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 1.4e-87 327.0 277 60.3
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 3.1e-87 325.9 283 59.7
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 4.1e-87 325.5 277 59.6
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 4.1e-87 325.5 277 60.3
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 4.1e-87 325.5 277 59.9
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 4.1e-87 325.5 280 59.6
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 9.0e-87 324.3 277 60.3
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-86 323.9 277 59.6
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.5e-86 323.6 277 58.1
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.5e-86 323.6 280 58.9
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.5e-86 323.6 280 58.9
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.5e-86 323.6 277 60.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.5e-86 322.0 277 59.9
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 4.5e-86 322.0 278 58.6
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 7.6e-86 321.2 277 57.0
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.3e-85 320.5 280 57.9
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 1.3e-85 320.5 277 58.1
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.3e-85 320.5 276 59.4
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.7e-85 320.1 277 57.8
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.9e-85 319.3 280 58.6
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 3.8e-85 318.9 277 57.8
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 3.8e-85 318.9 275 57.8
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 3.8e-85 318.9 277 58.5
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.0e-85 318.5 277 56.7
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 5.0e-85 318.5 277 58.1
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 8.5e-85 317.8 277 58.5
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.4e-84 317.0 269 58.7
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.4e-84 317.0 280 57.5
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 1.9e-84 316.6 279 57.0
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 1.9e-84 316.6 277 59.2
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 9.3e-84 314.3 274 56.9
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 9.3e-84 314.3 277 57.8
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.6e-83 313.5 277 56.3
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.0e-82 310.8 277 56.0
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.3e-82 310.5 276 56.9
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 3.9e-82 308.9 279 57.7
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 8.7e-82 307.8 278 57.2
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.1e-81 307.4 277 57.4
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.5e-81 307.0 277 57.4
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.9e-81 306.6 277 57.0
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.9e-81 306.6 277 57.0
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.9e-81 306.6 277 57.0
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 2.5e-81 306.2 277 56.7
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 2.5e-81 306.2 277 56.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 2.5e-81 306.2 277 57.4
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 3.3e-81 305.8 277 57.0
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 3.3e-81 305.8 277 57.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 3.3e-81 305.8 277 56.7
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 4.3e-81 305.4 277 57.0
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 4.3e-81 305.4 277 56.7
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 7.4e-81 304.7 279 57.7
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.3e-80 303.9 277 55.6
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 1.3e-80 303.9 277 56.3
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.6e-80 303.5 277 56.7
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.7e-80 302.4 277 57.0
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 3.7e-80 302.4 277 56.7
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 6.3e-80 301.6 277 59.2
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 1.1e-79 300.8 277 55.6
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.8e-79 300.1 289 55.4
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 5.9e-78 295.0 278 56.8
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 8.5e-77 291.2 255 57.3
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 7.2e-76 288.1 225 63.6
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 2.8e-72 276.2 276 53.3
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.1e-71 274.2 321 50.2
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 4.1e-71 272.3 249 56.6
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 8.5e-69 264.6 219 61.2
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 3.6e-67 259.2 225 57.8
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.0e-66 256.1 237 55.7
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 6.7e-66 255.0 206 60.2
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 2.6e-62 243.0 203 57.6
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.0e-61 241.1 211 56.4
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.2e-58 228.8 195 56.4
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.8e-58 228.0 195 56.9
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 3.1e-55 219.5 189 56.1
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.1e-52 211.1 292 43.8
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 2.6e-49 199.9 173 54.9
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 6.1e-43 178.7 323 37.2
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.3e-42 176.8 141 66.0
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.1e-39 167.9 172 50.6
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.2e-38 164.5 277 37.2
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.6e-33 146.7 111 67.6
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 2.1e-27 127.1 72 81.9
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 7.8e-22 108.6 327 31.8
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 3.3e-20 103.2 92 51.1
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 5.6e-20 102.4 114 50.0
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.2e-19 101.3 86 65.1
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 4.0e-18 96.3 142 46.5
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.7e-14 83.6 56 60.7
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.3e-13 80.5 63 65.1
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 2.8e-11 73.6 65 55.4
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 3.6e-11 73.2 277 26.0
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 7.6e-09 65.5 68 52.9


User provided reference genes

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