Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 2.4e-107 392.1 189 100.0
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.7e-60 236.5 186 61.3
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 2.2e-60 236.1 181 59.7
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.2e-59 232.3 181 59.1
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 9.2e-59 230.7 185 58.9
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 1.6e-58 229.9 180 62.8
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 2.7e-58 229.2 189 56.1
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 3.5e-58 228.8 186 59.7
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 7.8e-58 227.6 183 58.5
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.0e-57 227.3 183 59.6
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.3e-57 226.9 181 58.6
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 2.3e-57 226.1 192 57.8
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.0e-57 225.7 186 58.1
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 3.0e-57 225.7 189 54.5
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 5.1e-57 224.9 182 59.3
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 5.1e-57 224.9 185 57.3
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 5.1e-57 224.9 185 57.8
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 6.6e-57 224.6 186 58.1
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 1.5e-56 223.4 182 59.9
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 1.9e-56 223.0 189 55.0
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 2.5e-56 222.6 189 55.0
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 4.3e-56 221.9 185 57.3
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 9.5e-56 220.7 181 58.6
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 9.5e-56 220.7 180 60.0
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-55 220.3 185 58.4
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-55 220.3 185 58.4
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.2e-55 220.3 186 57.0
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 1.6e-55 219.9 183 57.4
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.6e-55 219.9 180 60.0
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.6e-55 219.9 181 56.4
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 2.1e-55 219.5 185 57.8
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 3.6e-55 218.8 182 59.9
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 6.2e-55 218.0 186 57.5
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 8.1e-55 217.6 180 59.4
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.4e-54 216.9 185 55.1
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.4e-54 216.9 181 56.9
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 1.4e-54 216.9 185 57.8
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.4e-54 216.9 185 57.8
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.4e-54 216.9 181 57.5
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.8e-54 216.5 181 57.5
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.8e-54 216.5 175 58.3
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 2.3e-54 216.1 182 56.0
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 2.3e-54 216.1 188 52.1
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 2.3e-54 216.1 186 57.0
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 3.1e-54 215.7 185 55.1
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 3.1e-54 215.7 186 56.5
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 4.0e-54 215.3 186 57.0
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 4.0e-54 215.3 180 58.3
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 4.0e-54 215.3 183 56.3
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 5.2e-54 214.9 181 55.8
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.2e-54 214.9 181 55.8
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 5.2e-54 214.9 184 57.1
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 5.2e-54 214.9 175 58.3
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 5.2e-54 214.9 175 57.7
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 5.2e-54 214.9 180 58.3
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 6.8e-54 214.5 180 57.2
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 8.9e-54 214.2 195 55.4
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 8.9e-54 214.2 181 57.5
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 8.9e-54 214.2 181 54.1
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 8.9e-54 214.2 186 56.5
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.2e-53 213.8 185 57.3
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-53 213.8 181 56.9
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.2e-53 213.8 181 56.9
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 1.2e-53 213.8 179 56.4
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 2.0e-53 213.0 180 57.2
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 3.4e-53 212.2 187 56.1
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 3.4e-53 212.2 184 57.6
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.4e-53 212.2 189 51.9
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 4.4e-53 211.8 187 56.1
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.4e-53 211.8 188 56.9
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 5.8e-53 211.5 179 54.7
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 5.8e-53 211.5 185 55.1
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 5.8e-53 211.5 183 55.2
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 9.9e-53 210.7 180 56.1
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.3e-52 210.3 176 56.8
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.3e-52 210.3 181 56.9
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.7e-52 209.9 181 57.5
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 2.9e-52 209.1 180 56.7
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 6.4e-52 208.0 185 55.1
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 1.1e-51 207.2 188 53.2
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 1.1e-51 207.2 186 51.6
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 2.4e-51 206.1 180 53.3
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 3.2e-51 205.7 186 52.2
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 5.4e-51 204.9 190 51.1
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.2e-50 203.8 186 55.4
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 2.7e-50 202.6 186 53.2
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 3.5e-50 202.2 186 54.3
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 3.5e-50 202.2 182 53.8
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 4.6e-50 201.8 186 53.2
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.0e-49 200.7 225 48.9
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 1.0e-49 200.7 186 53.8
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 1.3e-49 200.3 186 51.6
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 1.3e-49 200.3 185 53.5
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 3.9e-49 198.7 186 52.2
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 5.1e-49 198.4 186 52.2
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 5.1e-49 198.4 186 52.2
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 5.1e-49 198.4 186 52.2
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 6.6e-49 198.0 186 52.2
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 6.6e-49 198.0 181 52.5
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 6.6e-49 198.0 181 50.8
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.1e-48 197.2 185 50.3
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.9e-48 196.4 188 53.7
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 3.3e-48 195.7 187 54.0
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 5.6e-48 194.9 185 51.4
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 9.5e-48 194.1 148 62.8
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.7e-47 191.8 177 54.8
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.1e-46 190.7 186 51.6
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 1.4e-46 190.3 213 47.9
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 2.4e-46 189.5 183 48.6
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.0e-45 186.4 175 54.3
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.4e-45 185.7 185 46.5
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 7.6e-45 184.5 164 57.3
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 9.9e-45 184.1 147 60.5
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.2e-44 183.0 185 45.9
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 4.9e-44 181.8 188 47.9
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.4e-43 180.3 185 47.6
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 2.7e-42 176.0 182 45.1
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 5.6e-40 168.3 148 55.4
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.9e-35 153.3 136 53.7
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 2.1e-23 113.2 108 52.8
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.1e-22 109.4 81 63.0
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.4e-20 101.7 104 51.0
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 8.4e-20 101.3 77 58.4
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 4.6e-18 95.5 109 46.8
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 4.3e-16 89.0 105 40.0
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.5e-11 73.2 95 42.1


User provided reference genes

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