Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0119 Marchantia polymorpha HOM05D034728 ORTHO05D006583 1.9e-207 725.7 396 100.0
Mapoly0004s0106 Marchantia polymorpha HOM05D034728 ORTHO05D006583 1.1e-122 444.1 440 66.8
Mapoly0050s0063 Marchantia polymorpha HOM05D034728 ORTHO05D006583 5.2e-96 355.5 240 79.2
Mapoly0068s0008 Marchantia polymorpha HOM05D005234 ORTHO05D006583 2.3e-51 207.2 444 38.7
SEGI_06338 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 1.5e-15 88.2 97 47.4
Pp3c3_27330 Physcomitrium patens HOM05D005234 ORTHO05D006583 2.0e-15 87.8 99 52.5
ATR0827G035 Amborella trichopoda HOM05D005234 ORTHO05D006583 5.1e-11 73.2 117 38.5
Aqoxy4G03097 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 4.4e-10 70.1 93 44.1
Sopen06g012740 Solanum pennellii HOM05D005234 ORTHO05D006583 9.7e-10 68.9 119 37.0
CiPaw.01G279400 Carya illinoinensis HOM05D005234 ORTHO05D006583 2.2e-09 67.8 126 34.9
CDE04G1829 Ceratophyllum demersum HOM05D005234 ORTHO05D006583 2.2e-09 67.8 119 34.5
Duzib114G0593 Durio zibethinus HOM05D005234 ORTHO05D006583 3.7e-09 67.0 96 43.8
TPR.G10401 Trifolium pratense HOM05D005234 ORTHO05D006583 4.8e-09 66.6 94 37.2
Haze_16968 Corylus avellana HOM05D005234 ORTHO05D006583 6.3e-09 66.2 95 38.9
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 8.2e-09 65.9 117 35.9
Gorai.012G067000 Gossypium raimondii HOM05D005234 ORTHO05D006583 8.2e-09 65.9 96 41.7
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 1.4e-08 65.1 98 39.8
HPP92_021203 Vanilla planifolia HOM05D005234 ORTHO05D006583 1.4e-08 65.1 140 29.3
Gohir.D04G060251 Gossypium hirsutum HOM05D005234 ORTHO05D006583 1.8e-08 64.7 96 40.6
Gohir.A05G352700 Gossypium hirsutum HOM05D005234 ORTHO05D006583 2.4e-08 64.3 96 41.7
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 3.1e-08 63.9 120 32.5
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea HOM05D005234 ORTHO05D006583 5.3e-08 63.2 98 37.8
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea HOM05D005234 ORTHO05D006583 7.0e-08 62.8 98 36.7
Glyma.10G292500 Glycine max HOM05D005234 ORTHO05D006583 7.0e-08 62.8 98 36.7
GSVIVG01032632001 Vitis vinifera HOM05D005234 ORTHO05D006583 7.0e-08 62.8 123 35.8
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 9.1e-08 62.4 95 36.8
SalBow4G2780 Salvia bowleyana HOM05D005234 ORTHO05D006583 1.2e-07 62.0 124 36.3
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 4.5e-07 60.1 125 35.2
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 5.9e-07 59.7 119 34.5
EL10Ac2g03507 Beta vulgaris HOM05D005234 ORTHO05D006583 7.7e-07 59.3 96 37.5
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 7.7e-07 59.3 94 37.2
Sabra08G0033600 Salix brachista HOM05D005234 ORTHO05D006583 7.7e-07 59.3 97 37.1
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.3e-06 58.5 122 33.6
Cpa.g.sc1.299 Carica papaya HOM05D005234 ORTHO05D006583 1.3e-06 58.5 122 32.8
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 1.3e-06 58.5 119 32.8
Lj8A92T86 Lonicera japonica HOM05D005234 ORTHO05D006583 1.3e-06 58.5 93 36.6
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 2.2e-06 57.8 122 33.6
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 2.2e-06 57.8 95 33.7
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 2.2e-06 57.8 103 38.8
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 2.2e-06 57.8 120 35.0
RcHm_v2.0_Chr1g0364981 Rosa chinensis HOM05D005234 ORTHO05D006583 2.2e-06 57.8 103 35.0
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 2.9e-06 57.4 94 35.1
HanXRQChr14g0460751 Helianthus annuus HOM05D005234 ORTHO05D006583 2.9e-06 57.4 119 34.5
Os01g0976450 Oryza sativa ssp. japonica HOM05D005234 ORTHO05D006583 2.9e-06 57.4 94 40.4
TWI63G0851 Tripterygium wilfordii HOM05D005234 ORTHO05D006583 2.9e-06 57.4 119 34.5
Medtr1g115980 Medicago truncatula HOM05D005234 ORTHO05D006583 3.8e-06 57.0 94 34.0
Manes.07G106500 Manihot esculenta HOM05D005234 ORTHO05D006583 5.0e-06 56.6 98 33.7
Actinidia38226 Actinidia chinensis HOM05D005234 ORTHO05D006583 6.5e-06 56.2 120 32.5
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 6.5e-06 56.2 121 34.7
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 6.5e-06 56.2 121 34.7
Ca_11325_v3 Cicer arietinum L. HOM05D005234 ORTHO05D006583 6.5e-06 56.2 122 32.0
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 6.5e-06 56.2 97 34.0
AUR62042662 Chenopodium quinoa HOM05D005234 ORTHO05D006583 8.5e-06 55.8 101 34.7
SMO141G0013 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 8.5e-06 55.8 93 39.8


User provided reference genes

Program Settings