Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0106 Marchantia polymorpha HOM05D034728 ORTHO05D006583 1.1e-232 809.7 429 100.0
Mapoly0004s0119 Marchantia polymorpha HOM05D034728 ORTHO05D006583 1.1e-123 447.6 440 66.8
Mapoly0068s0008 Marchantia polymorpha HOM05D005234 ORTHO05D006583 2.1e-50 204.1 444 38.7
Mapoly0050s0063 Marchantia polymorpha HOM05D034728 ORTHO05D006583 2.8e-31 140.6 99 76.8
Pp3c3_27330 Physcomitrium patens HOM05D005234 ORTHO05D006583 9.8e-16 89.0 99 52.5
SEGI_06338 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 4.9e-15 86.7 95 46.3
ATR0827G035 Amborella trichopoda HOM05D005234 ORTHO05D006583 6.2e-10 69.7 117 36.8
Aqoxy4G03097 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 3.1e-09 67.4 93 43.0
CDE04G1829 Ceratophyllum demersum HOM05D005234 ORTHO05D006583 4.0e-09 67.0 119 34.5
CiPaw.01G279400 Carya illinoinensis HOM05D005234 ORTHO05D006583 8.9e-09 65.9 126 34.1
Duzib114G0593 Durio zibethinus HOM05D005234 ORTHO05D006583 1.2e-08 65.5 96 42.7
Sopen06g012740 Solanum pennellii HOM05D005234 ORTHO05D006583 1.2e-08 65.5 119 35.3
HPP92_021203 Vanilla planifolia HOM05D005234 ORTHO05D006583 2.0e-08 64.7 140 29.3
TPR.G10401 Trifolium pratense HOM05D005234 ORTHO05D006583 2.6e-08 64.3 94 36.2
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 4.4e-08 63.5 117 35.0
Haze_16968 Corylus avellana HOM05D005234 ORTHO05D006583 4.4e-08 63.5 95 37.9
Gorai.012G067000 Gossypium raimondii HOM05D005234 ORTHO05D006583 4.4e-08 63.5 96 40.6
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 5.8e-08 63.2 98 38.8
Gohir.D04G060251 Gossypium hirsutum HOM05D005234 ORTHO05D006583 9.8e-08 62.4 96 39.6
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea HOM05D005234 ORTHO05D006583 1.3e-07 62.0 99 38.4
Glyma.10G292500 Glycine max HOM05D005234 ORTHO05D006583 1.3e-07 62.0 98 36.7
Gohir.A05G352700 Gossypium hirsutum HOM05D005234 ORTHO05D006583 1.3e-07 62.0 96 40.6
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea HOM05D005234 ORTHO05D006583 1.7e-07 61.6 98 36.7
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 1.7e-07 61.6 120 31.7
SalBow4G2780 Salvia bowleyana HOM05D005234 ORTHO05D006583 1.7e-07 61.6 124 36.3
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 2.2e-07 61.2 95 35.8
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 3.7e-07 60.5 125 35.2
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 3.7e-07 60.5 119 34.5
GSVIVG01032632001 Vitis vinifera HOM05D005234 ORTHO05D006583 3.7e-07 60.5 123 35.0
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 8.3e-07 59.3 94 37.2
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 1.1e-06 58.9 119 32.8
EL10Ac2g03507 Beta vulgaris HOM05D005234 ORTHO05D006583 1.9e-06 58.2 96 36.5
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.9e-06 58.2 122 33.6
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 1.9e-06 58.2 94 35.1
HanXRQChr14g0460751 Helianthus annuus HOM05D005234 ORTHO05D006583 1.9e-06 58.2 119 35.3
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 2.4e-06 57.8 121 35.5
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 2.4e-06 57.8 121 35.5
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 2.4e-06 57.8 122 33.6
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 2.4e-06 57.8 95 33.7
Os01g0976450 Oryza sativa ssp. japonica HOM05D005234 ORTHO05D006583 2.4e-06 57.8 94 40.4
Sabra08G0033600 Salix brachista HOM05D005234 ORTHO05D006583 4.1e-06 57.0 97 36.1
Actinidia38226 Actinidia chinensis HOM05D005234 ORTHO05D006583 5.4e-06 56.6 120 32.5
Carub.0005s2171 Capsella rubella HOM05D005234 ORTHO05D006583 5.4e-06 56.6 95 34.7
Ca_11325_v3 Cicer arietinum L. HOM05D005234 ORTHO05D006583 5.4e-06 56.6 122 32.0
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 5.4e-06 56.6 103 37.9
Medtr1g115980 Medicago truncatula HOM05D005234 ORTHO05D006583 5.4e-06 56.6 94 34.0
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 7.1e-06 56.2 97 34.0
Lj8A92T86 Lonicera japonica HOM05D005234 ORTHO05D006583 7.1e-06 56.2 93 35.5
THA.LOC104809996 Tarenaya hassleriana HOM05D005234 ORTHO05D006583 7.1e-06 56.2 120 33.3
A09p48110 Brassica napus HOM05D005234 ORTHO05D006583 9.2e-06 55.8 121 34.7
Cpa.g.sc1.299 Carica papaya HOM05D005234 ORTHO05D006583 9.2e-06 55.8 122 32.0
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 9.2e-06 55.8 120 34.2


User provided reference genes

Program Settings