Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 8.7e-309 1062.8 520 100.0
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.0e-184 650.6 528 58.1
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 5.8e-180 634.8 524 57.6
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 5.8e-180 634.8 524 58.0
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 3.4e-172 609.0 531 54.4
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 6.5e-171 604.7 526 55.1
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 5.5e-170 601.7 523 55.3
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.2e-169 600.5 523 53.9
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 7.9e-169 597.8 522 54.8
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.9e-168 595.5 523 53.5
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 1.1e-167 594.0 523 54.5
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.9e-167 593.2 527 53.7
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 2.5e-167 592.8 522 54.8
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 2.5e-167 592.8 524 53.4
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 3.3e-167 592.4 522 54.8
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 3.3e-167 592.4 528 54.0
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 3.3e-167 592.4 520 54.0
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 7.4e-167 591.3 526 53.8
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 9.6e-167 590.9 524 54.0
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.3e-166 590.5 552 51.6
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 3.7e-166 589.0 524 54.4
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 6.2e-166 588.2 489 56.4
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 6.2e-166 588.2 523 54.5
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 3.1e-165 585.9 527 53.7
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 5.3e-165 585.1 522 54.0
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 1.5e-164 583.6 513 54.0
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 2.6e-164 582.8 530 54.7
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 4.5e-164 582.0 533 52.3
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 4.5e-164 582.0 524 53.4
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 7.6e-164 581.3 527 53.7
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.3e-163 580.5 528 52.8
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 1.3e-163 580.5 523 54.1
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 1.4e-162 577.0 530 53.0
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 1.4e-162 577.0 558 51.3
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 1.9e-162 576.6 519 53.9
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 4.2e-162 575.5 518 55.2
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 5.5e-162 575.1 525 52.4
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 9.3e-162 574.3 532 52.3
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 9.3e-162 574.3 496 56.7
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 1.6e-161 573.5 523 53.9
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 3.5e-161 572.4 527 53.1
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 2.3e-160 569.7 530 53.8
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 2.3e-160 569.7 518 52.3
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 2.3e-160 569.7 528 52.8
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 6.7e-160 568.2 524 52.7
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 1.9e-159 566.6 539 52.9
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 1.6e-158 563.5 525 52.2
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 2.2e-158 563.1 525 53.3
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 6.3e-158 561.6 565 49.2
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.1e-157 560.8 535 51.6
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 9.0e-157 557.8 558 49.5
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 2.2e-155 553.1 522 50.6
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 1.4e-154 550.4 519 52.0
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 1.4e-154 550.4 528 52.7
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 2.5e-154 549.7 530 52.8
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 5.5e-154 548.5 536 50.6
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 2.7e-153 546.2 520 50.4
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 4.6e-153 545.4 520 51.0
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 3.9e-152 542.3 523 50.1
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 3.9e-152 542.3 524 50.2
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 2.2e-150 536.6 522 49.8
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 4.8e-150 535.4 526 49.4
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 8.2e-150 534.6 519 49.9
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 8.2e-150 534.6 520 51.2
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 1.4e-149 533.9 548 47.4
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 4.1e-149 532.3 523 49.7
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 6.9e-149 531.6 520 50.4
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 9.1e-149 531.2 520 49.8
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 1.2e-148 530.8 520 49.8
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 1.2e-148 530.8 520 49.8
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 2.0e-148 530.0 520 49.6
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 3.2e-146 522.7 521 49.5
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 3.0e-144 516.2 519 51.3
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 3.0e-144 516.2 483 51.1
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 6.7e-144 515.0 524 48.5
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 2.0e-143 513.5 524 48.9
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 5.7e-143 511.9 606 43.9
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 2.2e-142 510.0 516 50.4
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 3.7e-142 509.2 540 47.6
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 3.7e-142 509.2 520 49.2
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 1.0e-139 501.1 449 53.9
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 5.2e-136 488.8 543 47.7
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 1.4e-133 480.7 517 48.0
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 3.8e-131 472.6 458 49.8
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 2.5e-130 469.9 580 44.1
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.0e-128 464.5 531 46.1
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 7.5e-127 458.4 509 45.4
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 6.1e-121 438.7 518 45.6
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 5.2e-120 435.6 520 43.8
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 4.1e-117 426.0 532 44.0
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.2e-110 403.7 611 37.8
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 1.1e-109 401.4 316 57.6
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 3.2e-109 399.8 300 59.7
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 2.7e-108 396.7 544 40.8
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 3.5e-100 369.8 298 57.4
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 6.0e-100 369.0 299 53.8
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 2.1e-97 360.5 640 33.3
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 3.4e-87 326.6 365 45.8
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.2e-85 320.1 232 61.6
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 1.0e-83 315.1 524 36.1
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 5.6e-82 309.3 549 34.8
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 2.4e-80 303.9 554 35.0
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 1.9e-74 284.3 316 46.2
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 3.5e-68 263.5 567 30.7
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.0e-54 218.8 372 37.1
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.3e-46 191.8 166 53.6
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 1.7e-46 191.4 197 47.2
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 1.3e-38 165.2 206 43.2
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.0e-35 155.6 103 68.9
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.0e-34 151.4 201 41.3
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 2.0e-34 151.4 202 43.6
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 7.4e-34 149.4 207 40.6
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.7e-33 148.3 594 25.3
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 2.2e-33 147.9 202 43.1
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 6.3e-33 146.4 201 40.3
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 9.1e-32 142.5 85 70.6
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 5.3e-16 90.1 183 30.1
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 5.9e-15 86.7 201 29.4
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 2.0e-10 71.6 130 32.3
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 2.0e-07 61.6 51 54.9
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 2.9e-06 57.8 48 50.0


User provided reference genes

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