Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 4.8e-191 671.0 344 100.0
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 4.5e-19 99.8 258 32.2
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 1.3e-18 98.2 250 34.0
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 1.7e-18 97.8 250 33.2
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 2.2e-18 97.4 279 31.9
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 3.8e-18 96.7 251 33.5
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 4.9e-18 96.3 250 33.2
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 6.4e-18 95.9 272 33.1
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 6.4e-18 95.9 267 33.0
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 1.1e-17 95.1 251 31.5
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 5.5e-17 92.8 254 31.1
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 9.3e-17 92.0 256 31.2
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 1.2e-16 91.7 283 29.3
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 4.6e-16 89.7 257 30.7
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 4.6e-16 89.7 261 31.0
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 4.6e-16 89.7 258 30.6
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 7.9e-16 89.0 253 32.4
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.3e-15 88.2 281 31.0
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 1.8e-15 87.8 277 28.5
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 2.3e-15 87.4 275 28.4
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 3.0e-15 87.0 255 31.8
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 3.0e-15 87.0 255 30.2
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 3.9e-15 86.7 260 31.2
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 3.9e-15 86.7 258 30.2
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 5.1e-15 86.3 265 30.9
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 8.7e-15 85.5 258 29.1
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.5e-14 84.7 259 32.0
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 2.5e-14 84.0 262 32.4
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 2.5e-14 84.0 270 30.0
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 5.6e-14 82.8 278 28.8
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 5.6e-14 82.8 256 28.5
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 2.1e-13 80.9 256 28.5
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 2.1e-13 80.9 257 30.4
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 2.8e-13 80.5 251 27.9
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 3.7e-13 80.1 252 29.8
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 3.7e-13 80.1 262 29.4
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 3.7e-13 80.1 276 28.6
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 6.2e-13 79.3 254 27.6
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 8.1e-13 79.0 287 28.2
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 1.1e-12 78.6 251 28.7
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.8e-12 77.8 254 28.7
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 1.8e-12 77.8 214 31.3
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 2.4e-12 77.4 253 27.7
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 2.4e-12 77.4 254 27.6
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 4.0e-12 76.6 282 28.7
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 4.0e-12 76.6 262 28.2
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.0e-12 76.6 259 28.6
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 5.3e-12 76.3 265 28.3
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 5.3e-12 76.3 268 27.2
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 6.9e-12 75.9 261 26.4
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 6.9e-12 75.9 262 30.2
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 6.9e-12 75.9 229 30.1
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 9.0e-12 75.5 209 30.1
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 9.0e-12 75.5 210 30.0
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 1.5e-11 74.7 190 31.6
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 1.5e-11 74.7 251 29.9
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 2.0e-11 74.3 267 29.6
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 2.6e-11 73.9 253 26.9
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 2.6e-11 73.9 301 27.6
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 5.8e-11 72.8 182 31.3
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 7.6e-11 72.4 194 32.5
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 7.6e-11 72.4 217 30.9
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.0e-10 72.0 254 29.1
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 1.0e-10 72.0 257 28.4
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 1.7e-10 71.2 192 31.8
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 2.2e-10 70.9 251 27.1
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 2.9e-10 70.5 257 26.5
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 2.9e-10 70.5 172 35.5
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 4.9e-10 69.7 254 27.6
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 8.4e-10 68.9 272 28.7
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.4e-09 68.2 250 27.2
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 1.9e-09 67.8 250 27.2
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 1.9e-09 67.8 272 29.8
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 3.2e-09 67.0 192 31.2
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 3.2e-09 67.0 210 29.5
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 4.2e-09 66.6 194 27.8
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.2e-09 66.6 236 29.2
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 4.2e-09 66.6 251 29.1
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 4.2e-09 66.6 282 24.8
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 5.5e-09 66.2 245 28.6
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 5.5e-09 66.2 186 30.1
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 5.5e-09 66.2 191 28.3
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 7.1e-09 65.9 243 28.0
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 1.6e-08 64.7 198 30.3
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.7e-08 63.9 228 27.6
MCO04G533 Micromonas commoda HOM05D007546 ORTHO05D009542 1.0e-07 62.0 258 26.0
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.3e-07 61.6 193 29.0
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 3.0e-07 60.5 193 30.1
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 5.1e-07 59.7 259 25.9
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 5.1e-07 59.7 241 26.1
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.9e-06 57.8 278 25.2
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 1.9e-06 57.8 159 32.1
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 1.9e-06 57.8 167 29.9
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 9.6e-06 55.5 193 25.9


User provided reference genes

Program Settings