Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 2.4e-137 493.4 602 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 1.9e-25 121.7 194 38.1
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 7.3e-25 119.8 128 48.4
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.2e-22 112.5 191 37.7
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 2.2e-21 108.2 135 37.8
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 3.7e-21 107.5 137 37.2
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.1e-20 105.9 135 37.8
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.1e-20 105.9 137 39.4
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 3.2e-20 104.4 135 37.8
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 5.4e-20 103.6 137 37.2
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.6e-19 102.1 135 36.3
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 2.7e-19 101.3 147 34.7
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 3.5e-19 100.9 135 34.1
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 4.6e-19 100.5 135 36.3
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 4.6e-19 100.5 136 38.2
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 4.6e-19 100.5 132 35.6
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 6.0e-19 100.1 147 34.7
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 6.0e-19 100.1 135 35.6
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 6.0e-19 100.1 128 39.1
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 7.8e-19 99.8 236 28.0
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 7.8e-19 99.8 137 36.5
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 7.8e-19 99.8 126 36.5
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 7.8e-19 99.8 135 35.6
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 7.8e-19 99.8 136 35.3
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 1.0e-18 99.4 147 34.0
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 1.3e-18 99.0 136 36.8
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 1.7e-18 98.6 173 34.7
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.7e-18 98.6 136 36.8
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 2.3e-18 98.2 137 35.8
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 3.0e-18 97.8 126 34.9
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 3.0e-18 97.8 136 36.0
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 3.0e-18 97.8 136 36.8
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 3.9e-18 97.4 136 36.8
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 3.9e-18 97.4 135 35.6
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 5.1e-18 97.1 136 37.5
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 5.1e-18 97.1 136 36.8
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 6.6e-18 96.7 137 38.7
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 6.6e-18 96.7 141 34.0
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 6.6e-18 96.7 135 34.8
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 6.6e-18 96.7 136 36.8
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 6.6e-18 96.7 136 36.8
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 6.6e-18 96.7 135 34.8
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 8.6e-18 96.3 126 37.3
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 8.6e-18 96.3 136 35.3
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 8.6e-18 96.3 140 35.7
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 8.6e-18 96.3 141 32.6
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 1.1e-17 95.9 182 34.1
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 1.1e-17 95.9 136 35.3
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.1e-17 95.9 141 33.3
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.1e-17 95.9 141 34.0
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 1.1e-17 95.9 131 35.9
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.5e-17 95.5 136 37.5
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 1.5e-17 95.5 136 36.0
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.5e-17 95.5 143 32.9
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 1.9e-17 95.1 185 31.9
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.9e-17 95.1 209 32.1
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 1.9e-17 95.1 148 34.5
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 1.9e-17 95.1 136 33.1
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 1.9e-17 95.1 136 35.3
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 1.9e-17 95.1 179 31.8
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 1.9e-17 95.1 136 35.3
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 2.5e-17 94.7 136 34.6
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 4.3e-17 94.0 185 31.4
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 4.3e-17 94.0 185 31.9
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 4.3e-17 94.0 141 32.6
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 4.3e-17 94.0 135 34.8
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 4.3e-17 94.0 141 33.3
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 4.3e-17 94.0 141 33.3
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 4.3e-17 94.0 136 35.3
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 5.6e-17 93.6 124 30.6
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 5.6e-17 93.6 124 30.6
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 5.6e-17 93.6 136 35.3
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 7.3e-17 93.2 185 31.9
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 7.3e-17 93.2 136 34.6
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 7.3e-17 93.2 136 36.0
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 9.5e-17 92.8 135 35.6
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 1.6e-16 92.0 138 35.5
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 2.1e-16 91.7 110 35.5
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 2.1e-16 91.7 136 35.3
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 2.8e-16 91.3 135 33.3
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 3.6e-16 90.9 136 33.8
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 1.4e-15 89.0 141 31.2
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 3.1e-15 87.8 147 29.3
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 3.1e-15 87.8 136 34.6
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 5.2e-15 87.0 128 34.4
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 5.2e-15 87.0 146 30.8
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 3.4e-14 84.3 141 30.5
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 7.6e-14 83.2 140 27.9
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 7.6e-14 83.2 163 29.4
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 9.9e-14 82.8 164 29.3
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 4.9e-13 80.5 136 33.1
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.1e-08 65.1 72 40.3


User provided reference genes

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