Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 0.0e+00 1349.3 729 100.0
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 5.7e-24 117.1 94 62.8
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 7.5e-24 116.7 311 32.2
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 2.8e-23 114.8 216 35.6
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.8e-23 114.8 277 31.4
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 8.3e-23 113.2 228 34.6
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 3.1e-22 111.3 94 56.4
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 3.1e-22 111.3 129 47.3
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 4.1e-22 110.9 245 29.8
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 5.4e-22 110.5 257 33.5
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 7.0e-22 110.2 288 33.3
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 9.1e-22 109.8 99 55.6
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 9.1e-22 109.8 216 35.2
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.2e-21 109.4 101 53.5
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 1.2e-21 109.4 81 61.7
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 2.0e-21 108.6 96 54.2
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 2.0e-21 108.6 99 50.5
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.0e-21 108.6 75 60.0
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.7e-21 108.2 292 32.5
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 3.5e-21 107.8 252 31.7
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 4.5e-21 107.5 89 56.2
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 4.5e-21 107.5 89 56.2
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 4.5e-21 107.5 113 47.8
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 4.5e-21 107.5 94 55.3
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 5.9e-21 107.1 268 30.6
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 7.7e-21 106.7 239 31.8
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 1.0e-20 106.3 102 52.0
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.0e-20 106.3 98 51.0
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.3e-20 105.9 304 30.9
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 1.3e-20 105.9 119 45.4
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 1.7e-20 105.5 97 53.6
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.7e-20 105.5 232 32.8
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.2e-20 105.1 245 30.6
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 2.2e-20 105.1 96 54.2
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 2.2e-20 105.1 96 53.1
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 2.2e-20 105.1 217 36.4
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 2.2e-20 105.1 79 57.0
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.9e-20 104.8 217 35.0
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 2.9e-20 104.8 88 55.7
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 2.9e-20 104.8 94 54.3
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 5.0e-20 104.0 245 32.2
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 6.5e-20 103.6 106 46.2
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 8.5e-20 103.2 85 52.9
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 8.5e-20 103.2 94 56.4
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 8.5e-20 103.2 237 31.6
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 1.1e-19 102.8 124 44.4
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 1.1e-19 102.8 269 31.6
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 1.1e-19 102.8 272 32.7
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.5e-19 102.4 85 54.1
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 1.5e-19 102.4 109 47.7
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.5e-19 102.4 317 28.1
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 1.9e-19 102.1 274 29.2
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.9e-19 102.1 113 46.0
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.9e-19 102.1 97 51.5
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 1.9e-19 102.1 277 31.0
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 2.5e-19 101.7 92 51.1
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.5e-19 101.7 292 32.2
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.5e-19 101.7 292 32.2
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 3.2e-19 101.3 85 54.1
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 3.2e-19 101.3 85 54.1
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.2e-19 101.3 98 49.0
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 4.2e-19 100.9 217 34.6
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 4.2e-19 100.9 99 49.5
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 4.2e-19 100.9 230 32.6
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 5.5e-19 100.5 302 30.1
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 5.5e-19 100.5 81 55.6
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 5.5e-19 100.5 289 30.8
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 5.5e-19 100.5 271 31.7
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 7.2e-19 100.1 169 35.5
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 7.2e-19 100.1 85 54.1
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 9.5e-19 99.8 292 31.8
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 9.5e-19 99.8 292 31.8
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.2e-18 99.4 95 49.5
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.2e-18 99.4 267 29.2
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.6e-18 99.0 98 48.0
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.6e-18 99.0 226 32.3
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.1e-18 98.6 247 32.0
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 2.8e-18 98.2 92 54.3
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 3.6e-18 97.8 135 40.0
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.7e-18 97.4 292 31.2
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 8.0e-18 96.7 280 28.9
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 1.0e-17 96.3 80 56.2
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 1.0e-17 96.3 173 37.6
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 2.3e-17 95.1 97 46.4
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 3.0e-17 94.7 172 36.0
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 4.0e-17 94.4 182 36.8
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 6.8e-17 93.6 176 35.2
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 3.4e-16 91.3 162 36.4
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.3e-15 89.4 259 29.7
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 1.3e-15 89.4 254 30.7
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 3.7e-15 87.8 735 23.8
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 8.3e-15 86.7 735 23.7
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.4e-14 85.9 745 24.0
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 3.1e-14 84.7 298 29.5
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 7.0e-14 83.6 251 30.7
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 7.0e-14 83.6 251 30.7
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 2.0e-13 82.0 262 30.5
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 3.5e-13 81.3 745 22.4
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 4.3e-11 74.3 763 21.8
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 5.6e-11 73.9 724 22.7
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.2e-10 72.8 238 30.7
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.6e-10 72.4 762 23.6
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.1e-10 72.0 72 48.6
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.4e-09 69.3 241 28.6
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 4.0e-09 67.8 211 29.4
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 2.6e-08 65.1 125 34.4
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 9.8e-08 63.2 602 23.9
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 9.8e-08 63.2 723 22.5
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 4.9e-07 60.8 759 20.9
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 6.4e-07 60.5 700 22.1
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 1.1e-06 59.7 239 28.5


User provided reference genes

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