Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 8.4e-271 936.4 468 100.0
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 3.3e-150 535.8 471 58.8
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 1.0e-138 497.7 484 55.4
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 1.8e-116 423.7 474 52.5
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 4.7e-104 382.5 464 46.6
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 6.1e-104 382.1 464 46.6
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 2.0e-102 377.1 475 44.8
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 4.4e-102 375.9 464 46.6
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.7e-101 372.9 473 45.5
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 6.3e-101 372.1 472 44.7
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 8.3e-101 371.7 467 44.3
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 8.3e-101 371.7 466 45.7
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.8e-100 370.5 466 45.7
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 2.4e-100 370.2 466 45.5
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 2.4e-100 370.2 472 43.9
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 4.1e-100 369.4 472 44.1
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 5.4e-100 369.0 472 43.9
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 1.2e-99 367.9 464 44.8
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 3.5e-99 366.3 472 43.9
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 3.5e-99 366.3 466 44.2
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 4.5e-99 365.9 468 44.7
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 5.9e-99 365.5 464 46.8
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 5.9e-99 365.5 465 44.1
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 7.7e-99 365.2 466 44.6
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 2.3e-98 363.6 465 45.8
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.9e-98 363.2 468 44.2
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 3.8e-98 362.8 468 44.0
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 5.0e-98 362.5 469 44.1
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 5.0e-98 362.5 468 44.2
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 8.6e-98 361.7 469 43.7
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.5e-97 360.9 517 41.6
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.9e-97 360.5 466 44.0
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 3.3e-97 359.8 477 43.8
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 3.3e-97 359.8 464 44.0
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 9.5e-97 358.2 475 43.8
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.2e-96 357.8 468 44.2
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 2.1e-96 357.1 473 45.5
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.1e-96 357.1 466 44.0
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 3.6e-96 356.3 465 43.2
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 4.7e-96 355.9 474 43.7
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 4.7e-96 355.9 469 43.3
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.0e-95 354.8 465 42.8
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 1.4e-95 354.4 467 43.5
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 3.0e-95 353.2 468 43.4
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 1.2e-94 351.3 466 42.1
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 5.7e-94 349.0 464 43.8
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 2.9e-93 346.7 472 40.9
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 6.3e-93 345.5 466 42.1
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.4e-92 344.4 497 41.6
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 1.8e-92 344.0 468 42.5
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.8e-92 344.0 465 43.4
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.8e-92 344.0 465 43.2
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.2e-92 343.2 469 41.8
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 3.2e-92 343.2 469 42.2
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 4.1e-92 342.8 463 40.8
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 4.1e-92 342.8 464 42.0
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 9.2e-92 341.7 468 41.9
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 1.6e-91 340.9 468 42.9
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.6e-91 340.9 466 41.8
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 2.0e-91 340.5 466 42.3
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 2.0e-91 340.5 464 41.6
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 2.0e-91 340.5 463 42.1
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 2.0e-91 340.5 469 42.4
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 3.5e-91 339.7 467 42.2
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 4.6e-91 339.3 466 42.3
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 5.9e-91 339.0 466 42.7
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 5.9e-91 339.0 468 41.7
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 1.3e-90 337.8 464 42.2
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 1.3e-90 337.8 465 42.8
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 1.7e-90 337.4 465 41.7
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 1.7e-90 337.4 465 41.7
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 2.9e-90 336.7 462 41.6
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 2.9e-90 336.7 468 41.9
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 2.9e-90 336.7 469 42.0
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 3.9e-90 336.3 464 41.4
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 8.6e-90 335.1 458 42.4
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 1.5e-89 334.3 466 42.3
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.5e-89 334.3 464 42.0
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 1.9e-89 334.0 465 41.3
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 2.5e-89 333.6 470 42.1
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 3.3e-89 333.2 463 42.1
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 2.1e-88 330.5 464 41.2
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 4.7e-88 329.3 466 42.1
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 4.7e-88 329.3 468 42.3
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 8.0e-88 328.6 463 41.9
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.4e-87 327.8 468 41.9
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 1.8e-87 327.4 466 41.8
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 1.8e-87 327.4 463 41.3
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 1.5e-86 324.3 457 42.0
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 7.5e-86 322.0 466 41.4
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 7.5e-86 322.0 466 41.4
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 7.5e-86 322.0 466 41.4
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 1.7e-85 320.9 440 43.2
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 3.7e-85 319.7 463 39.1
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 7.8e-83 312.0 465 40.2
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 6.6e-82 308.9 463 39.7
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 9.8e-78 295.0 457 39.8
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 5.6e-73 279.3 465 37.4
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 3.6e-72 276.6 411 41.1
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 3.5e-67 260.0 471 36.3
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 1.2e-64 251.5 296 47.3
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 3.1e-63 246.9 301 46.2
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.2e-62 245.0 471 34.0
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 1.5e-57 228.0 397 36.3
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 5.6e-57 226.1 174 62.1
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.3e-56 224.9 300 43.3
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 4.0e-55 219.9 173 61.3
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 8.4e-53 212.2 173 59.5
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 2.7e-43 180.6 489 29.9
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 1.5e-41 174.9 493 30.0
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 1.3e-40 171.8 299 36.8
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 1.7e-37 161.4 511 27.0
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 2.0e-30 137.9 184 42.4
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.2e-29 134.4 119 55.5
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 6.9e-23 112.8 102 50.0
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 4.3e-17 93.6 107 46.7
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 2.9e-13 80.9 171 32.2
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.8e-10 71.6 93 41.9
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.8e-07 61.6 70 45.7
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 4.1e-07 60.5 106 34.0


User provided reference genes

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