Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.S033916 Manihot esculenta HOM05D001018 ORTHO05D000626 2.7e-67 258.5 125 100.0
Manes.15G193301 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.18G143401 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S001635 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S003597 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S004905 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S005886 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S007848 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S011772 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S015696 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S017986 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S020275 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S024052 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S024852 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S025016 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S026216 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S026252 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S026952 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S027016 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S027516 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S029252 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S030016 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S030252 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S031516 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S031716 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S032416 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S033816 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S034816 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S035416 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S036516 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S036816 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S037516 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S039116 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S041116 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S043216 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S043916 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S045216 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S046916 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S048416 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S049316 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S051116 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S051616 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S052516 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S053016 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S053216 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S054816 Manihot esculenta HOM05D001018 ORTHO05D000626 1.7e-64 249.2 125 96.8
Manes.S041816 Manihot esculenta HOM05D001018 ORTHO05D000626 2.2e-64 248.8 125 96.0
Manes.S028116 Manihot esculenta HOM05D001018 ORTHO05D000626 8.2e-64 246.9 125 96.0
Potri.008G224210 Populus trichocarpa HOM05D001018 ORTHO05D000626 2.6e-62 241.9 125 94.4
Potri.014G185588 Populus trichocarpa HOM05D001018 ORTHO05D000626 2.6e-62 241.9 125 94.4
Potri.014G185804 Populus trichocarpa HOM05D001018 ORTHO05D000626 2.6e-62 241.9 125 94.4
Potri.014G186452 Populus trichocarpa HOM05D001018 ORTHO05D000626 2.6e-62 241.9 125 94.4
QL11p027314 Quercus lobata HOM05D001018 ORTHO05D000626 1.3e-61 239.6 124 94.4
CiPaw.05G154900 Carya illinoinensis HOM05D001018 ORTHO05D000626 2.9e-61 238.4 125 93.6
CiPaw.05G155900 Carya illinoinensis HOM05D001018 ORTHO05D000626 2.9e-61 238.4 125 93.6
CiPaw.15G103300 Carya illinoinensis HOM05D001018 ORTHO05D000626 2.9e-61 238.4 125 93.6
ScUNg0001640 Simmondsia chinensis HOM05D001018 ORTHO05D000626 1.1e-60 236.5 125 92.8
Gorai.001G276600 Gossypium raimondii HOM05D001018 ORTHO05D000626 2.5e-60 235.3 125 92.8
Gorai.001G276700 Gossypium raimondii HOM05D001018 ORTHO05D000626 2.5e-60 235.3 125 92.8
Gorai.001G276800 Gossypium raimondii HOM05D001018 ORTHO05D000626 2.5e-60 235.3 125 92.8
Migut.A01079 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.2e-60 235.0 125 92.8
Migut.A01234 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.2e-60 235.0 125 92.8
Migut.A01241 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.2e-60 235.0 125 92.8
Migut.C00303 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.2e-60 235.0 120 95.8
Migut.G00890 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.2e-60 235.0 125 92.8
Manes.S029752 Manihot esculenta HOM05D001018 ORTHO05D000626 3.2e-60 235.0 121 93.4
Manes.S032916 Manihot esculenta HOM05D001018 ORTHO05D000626 3.2e-60 235.0 121 93.4
Atru.chr6.2695 Acer truncatum HOM05D001018 ORTHO05D000626 5.5e-60 234.2 125 92.0
CSS0041698 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 5.5e-60 234.2 125 92.0
CSS0025197 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 7.2e-60 233.8 125 92.8
Sopen00g002220 Solanum pennellii HOM05D001018 ORTHO05D000626 1.2e-59 233.0 125 92.0
PGSC0003DMG402019042 Solanum tuberosum HOM05D001018 ORTHO05D000626 1.2e-59 233.0 125 92.0
Migut.A01240 Erythranthe guttata HOM05D001018 ORTHO05D000626 1.6e-59 232.6 125 92.0
CiPaw.15G104700 Carya illinoinensis HOM05D001018 ORTHO05D000626 2.1e-59 232.3 125 92.0
CSS0020036 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 4.7e-59 231.1 125 90.4
CSS0026871 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.4e-58 229.6 125 90.4
unitig_670.g34683 Utricularia gibba HOM05D001018 ORTHO05D000626 1.8e-58 229.2 125 90.4
CSS0050263 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 3.9e-58 228.0 125 91.2
CSS0000564 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.5e-57 226.1 125 88.8
Migut.A01193 Erythranthe guttata HOM05D001018 ORTHO05D000626 8.2e-56 220.3 125 88.0
Migut.A01196 Erythranthe guttata HOM05D001018 ORTHO05D000626 1.8e-55 219.2 125 87.2
Migut.A01194 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.5e-54 214.9 120 89.2
Migut.A01220 Erythranthe guttata HOM05D001018 ORTHO05D000626 1.9e-52 209.1 108 94.4
Atru.chr10.41 Acer truncatum HOM05D001018 ORTHO05D000626 7.2e-52 207.2 125 84.0
Sopen07g009480 Solanum pennellii HOM05D001018 ORTHO05D000626 6.1e-51 204.1 125 84.0
CiPaw.05G156000 Carya illinoinensis HOM05D001018 ORTHO05D000626 8.8e-50 200.3 105 92.4
unitig_581.g33720 Utricularia gibba HOM05D001018 ORTHO05D000626 8.8e-50 200.3 123 83.7
CiPaw.15G105700 Carya illinoinensis HOM05D001018 ORTHO05D000626 3.3e-49 198.4 105 91.4
Migut.A01245 Erythranthe guttata HOM05D001018 ORTHO05D000626 9.1e-47 190.3 101 91.1
Sed0017842 Sechium edule HOM05D001018 ORTHO05D000626 1.3e-45 186.4 98 90.8
ScUNg0001590 Simmondsia chinensis HOM05D001018 ORTHO05D000626 1.5e-44 183.0 127 76.4
unitig_685.g33146 Utricularia gibba HOM05D001018 ORTHO05D000626 4.1e-39 164.9 123 73.2
unitig_721.g34549 Utricularia gibba HOM05D001018 ORTHO05D000626 3.5e-38 161.8 129 70.5
Migut.A01232 Erythranthe guttata HOM05D001018 ORTHO05D000626 5.9e-38 161.0 88 90.9
HPP92_020620 Vanilla planifolia HOM05D000099 ORTHO05D000205 6.5e-37 157.5 98 82.7
Migut.A01215 Erythranthe guttata HOM05D001018 ORTHO05D000626 5.5e-36 154.5 77 94.8
Glyma.U009202 Glycine max HOM05D001018 ORTHO05D000626 8.0e-35 150.6 98 77.6
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 1.5e-33 146.4 90 82.2
unitig_102.g31708 Utricularia gibba HOM05D001018 ORTHO05D000626 4.3e-28 128.3 90 75.6
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 5.6e-28 127.9 84 72.6
LjContig00006g0002932 Lotus japonicus HOM05D001018 ORTHO05D002636 2.8e-27 125.6 124 59.7
LjContig00488g0014329 Lotus japonicus HOM05D001018 ORTHO05D002636 2.8e-27 125.6 124 59.7
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 1.4e-26 123.2 74 83.8
unitig_885.g34269 Utricularia gibba HOM05D001018 ORTHO05D000626 3.0e-26 122.1 94 72.3
CDE02G3011 Ceratophyllum demersum HOM05D001018 ORTHO05D004854 2.2e-24 115.9 85 69.4
Sopen00g013130 Solanum pennellii HOM05D001018 ORTHO05D000626 3.7e-24 115.2 65 89.2
Cpa.g.sc2112.2 Carica papaya HOM05D001018 ORTHO05D000626 4.1e-23 111.7 73 79.5
Zm00001eb264030 Zea mays HOM05D001018 ORTHO05D000626 1.2e-22 110.2 71 83.1
Phvul.011G157400 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 1.7e-13 79.7 37 89.2
CiPaw.05G153900 Carya illinoinensis HOM05D001018 ORTHO05D000626 3.0e-13 79.0 45 86.7
unitig_172.g35454 Utricularia gibba HOM05D001018 ORTHO05D000626 1.1e-12 77.0 116 44.8
Phvul.002G055350 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 3.3e-12 75.5 64 60.9
Phvul.003G090100 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 4.3e-12 75.1 52 69.2
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 5.6e-12 74.7 67 59.7
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 5.6e-12 74.7 67 59.7
Sopen00g001850 Solanum pennellii HOM05D001018 ORTHO05D000626 1.2e-11 73.6 41 78.0
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 6.8e-10 67.8 38 86.8
unitig_579.g34807 Utricularia gibba HOM05D001018 ORTHO05D000626 8.9e-10 67.4 65 60.0
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 4.4e-09 65.1 43 76.7
A06p23770 Brassica napus HOM05D000920 ORTHO05D004854 7.5e-09 64.3 37 86.5
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 7.5e-09 64.3 37 86.5
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 7.5e-09 64.3 37 86.5
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-08 63.2 38 81.6
unitig_579.g34818 Utricularia gibba HOM05D001018 ORTHO05D000626 3.7e-08 62.0 65 58.5
A06p24120 Brassica napus HOM05D001018 ORTHO05D000626 6.4e-08 61.2 38 78.9
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 6.4e-08 61.2 38 81.6
unitig_678.g33163 Utricularia gibba HOM05D001018 ORTHO05D000626 1.1e-07 60.5 65 55.4
Zm00001eb440240 Zea mays HOM05D001018 ORTHO05D000626 1.1e-07 60.5 78 52.6
A05p21940 Brassica napus HOM05D001018 ORTHO05D000626 1.4e-07 60.1 37 81.1
Oeu051370.1 Olea europaea HOM05D005014 ORTHO05D003704 1.4e-07 60.1 65 50.8
unitig_631.g33700 Utricularia gibba HOM05D001018 ORTHO05D000626 1.9e-07 59.7 65 55.4
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 3.2e-07 58.9 35 82.9
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 4.1e-07 58.5 36 77.8
A05p22280 Brassica napus HOM05D001018 ORTHO05D000626 5.4e-07 58.2 34 82.4
unitig_269.g35314 Utricularia gibba HOM05D001018 ORTHO05D000626 2.1e-06 56.2 65 52.3
Zm00001eb440590 Zea mays HOM05D048332 ORTHO05D442696 3.5e-06 55.5 58 60.3


User provided reference genes

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