Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 0.0e+00 1109.0 539 100.0
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 1.7e-270 935.6 517 88.2
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 1.8e-248 862.4 530 79.6
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 6.3e-246 854.0 542 76.9
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 2.4e-245 852.0 538 77.5
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 5.9e-244 847.4 466 86.5
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.3e-243 846.3 543 76.4
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.7e-243 845.9 542 76.2
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 1.7e-243 845.9 568 75.7
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 2.3e-243 845.5 530 77.7
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 3.8e-243 844.7 465 85.8
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 2.1e-241 839.0 544 78.5
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 3.6e-241 838.2 545 77.6
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 6.8e-240 833.9 541 75.6
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 6.3e-238 827.4 543 76.1
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.8e-237 825.9 545 75.2
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 1.8e-237 825.9 541 75.2
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 1.2e-236 823.2 619 68.3
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 1.6e-236 822.8 548 75.7
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 3.5e-236 821.6 548 73.5
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 7.8e-236 820.5 461 84.8
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 1.0e-235 820.1 539 74.6
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 2.3e-235 818.9 540 75.2
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.9e-235 818.5 540 75.0
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.9e-235 818.5 540 75.2
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 2.9e-235 818.5 478 81.2
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.9e-234 815.8 468 82.3
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 3.3e-234 815.1 463 83.2
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.3e-234 814.7 548 72.1
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 2.8e-233 812.0 465 82.4
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 6.1e-233 810.8 553 72.9
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 8.0e-233 810.4 530 76.2
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 8.0e-233 810.4 540 73.9
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.0e-232 810.1 469 81.7
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 5.2e-232 807.7 459 83.4
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 5.2e-232 807.7 493 78.3
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 6.8e-232 807.4 544 72.4
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 8.9e-232 807.0 542 73.1
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 2.0e-231 805.8 489 78.9
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 2.2e-230 802.4 536 72.6
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 3.7e-230 801.6 475 80.0
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 6.4e-230 800.8 619 67.4
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 1.4e-229 799.7 545 72.1
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 1.4e-229 799.7 548 71.7
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.8e-229 799.3 536 72.6
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 5.4e-229 797.7 467 80.7
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 9.2e-229 797.0 539 72.4
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.2e-228 796.6 545 71.9
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.2e-228 796.6 469 81.0
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 2.0e-228 795.8 561 69.3
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 2.0e-228 795.8 543 72.6
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.1e-226 790.0 542 72.7
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 7.3e-226 787.3 549 70.7
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 7.3e-226 787.3 546 71.1
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 9.5e-226 786.9 461 80.7
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 2.8e-225 785.4 465 78.7
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 4.0e-224 781.6 538 71.6
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.0e-224 781.6 469 78.3
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.2e-223 780.0 521 74.7
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.2e-223 780.0 543 71.3
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.2e-223 780.0 539 70.1
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 4.4e-223 778.1 472 77.1
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 5.8e-223 777.7 539 72.2
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 1.3e-222 776.5 539 71.4
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 2.9e-222 775.4 531 71.2
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 6.4e-222 774.2 540 70.2
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 8.3e-222 773.9 469 77.8
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 2.4e-221 772.3 536 70.1
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 5.4e-221 771.2 550 70.0
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.2e-220 770.0 541 70.1
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.0e-219 766.9 546 70.1
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 4.3e-218 761.5 466 77.7
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 2.8e-217 758.8 481 74.4
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 2.8e-217 758.8 481 75.3
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 1.1e-216 756.9 498 72.9
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 8.9e-216 753.8 476 74.2
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 2.0e-215 752.7 546 70.9
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 2.6e-215 752.3 495 73.5
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 5.8e-215 751.1 540 68.3
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 5.8e-215 751.1 540 68.1
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 9.9e-215 750.4 492 72.4
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 8.3e-214 747.3 472 73.5
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 3.2e-213 745.3 472 74.6
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 7.1e-213 744.2 477 73.8
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 9.2e-213 743.8 467 73.7
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 3.5e-212 741.9 518 71.0
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 3.5e-212 741.9 502 71.7
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 7.8e-212 740.7 472 73.9
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 3.0e-211 738.8 472 74.2
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 5.6e-210 734.6 509 69.7
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.2e-209 733.4 472 73.5
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 2.1e-209 732.6 472 73.5
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 3.6e-209 731.9 479 73.1
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 4.7e-209 731.5 468 73.1
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.2e-207 726.9 655 58.5
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 2.2e-206 722.6 436 76.4
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 8.7e-203 710.7 529 67.1
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 3.3e-202 708.8 421 78.6
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 7.3e-202 707.6 488 69.9
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.8e-200 703.0 463 73.2
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 6.9e-200 701.0 488 69.3
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 9.0e-200 700.7 468 74.6
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 2.6e-199 699.1 421 77.7
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 7.1e-197 691.0 458 71.0
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 1.4e-192 676.8 441 72.6
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 1.9e-189 666.4 464 66.8
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 1.9e-186 656.4 421 73.6
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 1.6e-185 653.3 464 65.9
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 3.1e-184 649.0 461 65.3
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 9.9e-183 644.0 464 65.1
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 4.6e-180 635.2 477 63.9
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 1.1e-178 630.6 460 66.3
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 6.2e-177 624.8 449 65.3
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 5.3e-176 621.7 515 57.7
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 4.2e-173 612.1 461 64.2
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.1e-172 609.8 472 62.7
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 2.1e-172 609.8 472 65.7
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.3e-170 602.4 356 80.1
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 2.2e-169 599.7 460 62.4
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 1.9e-165 586.6 482 60.8
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 1.5e-151 540.4 477 56.8
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 2.2e-142 510.0 355 69.9
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.2e-141 506.1 385 66.5
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 5.5e-125 452.2 421 53.0
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.5e-122 444.1 255 81.2
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 5.7e-122 442.2 316 69.6
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 6.6e-118 428.7 301 71.1
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 1.1e-117 427.9 514 46.1
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 7.8e-103 378.6 261 69.0
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 2.2e-97 360.5 333 57.7
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 7.3e-93 345.5 228 75.9
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 7.8e-87 325.5 255 59.2
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 8.7e-86 322.0 214 67.8
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 6.9e-75 285.8 242 56.2
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 2.7e-71 273.9 213 69.0
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 2.9e-57 227.3 144 75.7
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 1.9e-53 214.5 162 62.3
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.7e-44 183.7 113 72.6
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 6.3e-44 183.0 172 59.9
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 1.5e-42 178.3 157 61.8
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 2.5e-40 171.0 100 82.0
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 2.5e-40 171.0 115 75.7
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 6.1e-39 166.4 91 82.4
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.8e-33 147.1 129 57.4
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 5.7e-21 106.7 113 55.8
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 6.1e-15 86.7 60 58.3
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 2.6e-13 81.3 49 83.7
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 2.6e-13 81.3 49 83.7
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 1.8e-11 75.1 62 66.1
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 7.0e-11 73.2 56 64.3
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 3.3e-08 64.3 58 62.1


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