Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 7.7e-144 513.8 269 100.0
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 9.0e-84 314.3 359 55.4
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 1.8e-63 246.9 359 46.5
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 3.9e-63 245.7 360 46.1
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 1.5e-62 243.8 360 45.6
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 4.4e-62 242.3 360 46.9
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 5.7e-62 241.9 359 46.0
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 7.4e-62 241.5 358 46.1
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 2.4e-60 236.5 364 45.1
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 1.5e-59 233.8 364 46.2
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 1.0e-58 231.1 360 45.3
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 1.3e-58 230.7 359 45.4
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 3.8e-58 229.2 361 42.9
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 1.1e-57 227.6 360 43.1
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 1.4e-57 227.3 357 46.2
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 5.5e-57 225.3 359 45.1
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 5.5e-57 225.3 357 45.9
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 1.2e-56 224.2 361 43.2
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 4.7e-56 222.2 356 43.3
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 8.8e-55 218.0 360 43.9
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 1.1e-54 217.6 359 44.3
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 1.1e-54 217.6 234 56.4
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 3.3e-54 216.1 234 55.1
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 4.4e-54 215.7 234 53.8
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 2.8e-53 213.0 233 55.4
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 3.7e-53 212.6 234 54.3
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 8.2e-53 211.5 234 53.8
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 3.1e-52 209.5 234 53.8
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 7.0e-52 208.4 363 42.4
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 1.6e-51 207.2 234 53.0
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 2.6e-51 206.5 325 44.0
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 3.5e-51 206.1 228 53.9
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 3.5e-51 206.1 235 50.6
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 4.5e-51 205.7 339 43.7
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 4.5e-51 205.7 234 53.0
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 1.0e-50 204.5 234 54.3
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.7e-50 203.8 379 42.0
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 2.9e-50 203.0 250 49.6
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 3.8e-50 202.6 340 40.6
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 3.8e-50 202.6 350 41.7
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 5.0e-50 202.2 234 51.3
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 6.5e-50 201.8 228 53.1
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 8.5e-50 201.4 324 40.4
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 8.5e-50 201.4 324 40.4
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.1e-49 201.1 271 48.3
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 2.5e-49 199.9 236 51.7
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 3.2e-49 199.5 228 50.4
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 5.5e-49 198.7 228 55.7
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 5.5e-49 198.7 228 55.3
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 5.5e-49 198.7 234 50.4
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 7.2e-49 198.4 315 41.3
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 7.2e-49 198.4 315 41.3
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 7.2e-49 198.4 229 52.0
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 1.2e-48 197.6 315 41.3
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 1.6e-48 197.2 234 50.4
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 2.1e-48 196.8 236 50.0
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 2.7e-48 196.4 234 49.6
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 6.1e-48 195.3 340 40.0
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 8.0e-48 194.9 229 51.1
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 8.0e-48 194.9 223 52.5
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 8.0e-48 194.9 285 46.7
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.8e-47 193.7 247 50.2
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 2.3e-47 193.4 235 49.8
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 3.0e-47 193.0 325 40.0
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 3.0e-47 193.0 248 48.8
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 6.7e-47 191.8 234 48.7
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 6.7e-47 191.8 234 49.1
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 6.7e-47 191.8 327 39.8
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 1.2e-46 191.0 314 42.7
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 1.5e-46 190.7 342 41.2
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 1.5e-46 190.7 228 49.6
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 2.0e-46 190.3 328 39.3
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 3.3e-46 189.5 223 48.0
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 4.4e-46 189.1 315 40.0
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 9.7e-46 188.0 327 39.4
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 9.7e-46 188.0 234 48.7
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 1.7e-45 187.2 234 48.7
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 4.8e-45 185.7 234 48.3
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 6.3e-45 185.3 215 51.6
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 4.1e-44 182.6 212 52.4
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 9.1e-44 181.4 229 48.5
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 2.7e-43 179.9 389 36.2
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 3.5e-43 179.5 234 46.2
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 2.2e-42 176.8 228 46.9
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 1.1e-41 174.5 228 46.9
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 6.1e-40 168.7 223 43.9
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 3.0e-39 166.4 238 47.5
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 4.8e-37 159.1 356 37.4
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 1.6e-35 154.1 270 43.0
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 2.3e-34 150.2 339 37.5
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 5.0e-34 149.1 230 42.6
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 2.1e-32 143.7 422 34.1
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 8.0e-32 141.7 380 32.1
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 1.4e-31 141.0 224 40.2
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.8e-31 140.6 256 39.5
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 5.2e-31 139.0 268 41.8
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 1.5e-30 137.5 138 57.2
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 2.0e-30 137.1 206 45.6
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 2.6e-30 136.7 183 45.9
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 6.3e-29 132.1 204 45.1
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 1.8e-28 130.6 144 53.5
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 5.4e-28 129.0 230 38.7
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 5.9e-27 125.6 207 38.2
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 7.8e-27 125.2 144 52.8
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 6.6e-26 122.1 123 57.7
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 4.7e-24 115.9 181 43.1
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 4.1e-20 102.8 82 63.4
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 5.4e-20 102.4 116 53.4
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 1.1e-17 94.7 155 41.3
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 9.5e-17 91.7 104 48.1
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 8.0e-16 88.6 147 40.8
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 2.3e-15 87.0 96 55.2
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 4.4e-14 82.8 76 56.6
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 1.7e-13 80.9 163 36.2
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 2.0e-11 73.9 104 39.4
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 2.0e-11 73.9 233 29.6
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 2.7e-11 73.6 90 46.7
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 8.6e-10 68.6 47 68.1
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.1e-07 61.6 102 36.3
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 2.0e-06 57.4 76 39.5
Sabra02G0024500 Salix brachista HOM05D001587 ORTHO05D037360 5.8e-06 55.8 38 68.4


User provided reference genes

Program Settings