Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 9.7e-298 1026.5 735 100.0
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 3.8e-177 625.9 767 72.9
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 6.5e-177 625.2 767 72.9
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 3.0e-174 616.3 759 63.5
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 9.1e-171 604.7 767 71.7
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 4.5e-170 602.4 756 64.0
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 7.2e-168 595.1 757 61.0
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 4.2e-160 569.3 773 67.7
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 1.2e-159 567.8 764 69.5
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 3.0e-158 563.1 767 68.2
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 2.6e-157 560.1 763 69.2
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 9.8e-157 558.1 763 69.2
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 4.9e-156 555.8 763 69.2
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.6e-149 533.5 765 68.6
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 3.4e-149 533.1 769 67.2
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 4.9e-148 529.3 765 68.5
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 5.4e-147 525.8 768 67.1
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 9.5e-144 515.0 770 46.5
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 9.5e-144 515.0 770 46.5
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 3.6e-143 513.1 450 58.0
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 4.7e-143 512.7 680 71.3
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.1e-142 511.5 675 71.7
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.5e-141 507.7 762 65.1
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 4.4e-141 506.1 754 59.7
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 7.5e-141 505.4 683 71.6
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.3e-140 504.6 772 65.8
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.9e-139 500.7 749 66.0
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 2.4e-139 500.4 526 60.6
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 3.2e-139 500.0 744 67.7
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 9.2e-139 498.4 661 73.7
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 2.1e-138 497.3 528 50.4
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.7e-138 496.9 536 60.6
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 3.5e-138 496.5 636 75.6
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 3.5e-138 496.5 674 69.7
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 4.6e-138 496.1 536 60.6
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 1.1e-136 491.5 601 76.2
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.6e-135 486.5 783 56.8
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 8.1e-135 485.3 734 65.3
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 4.0e-134 483.0 505 62.0
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 5.2e-134 482.6 517 60.5
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 8.9e-134 481.9 673 70.9
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 1.5e-133 481.1 746 58.7
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 2.6e-133 480.3 762 58.5
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 5.8e-133 479.2 808 62.3
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 5.8e-133 479.2 505 62.0
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 5.8e-133 479.2 513 60.0
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 7.5e-133 478.8 673 69.1
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 9.9e-133 478.4 775 63.5
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 1.1e-131 474.9 508 60.2
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 7.1e-131 472.2 586 76.5
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.6e-130 471.1 670 69.7
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 2.7e-130 470.3 762 64.8
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 6.0e-130 469.2 513 58.7
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.0e-129 468.4 514 61.3
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 3.0e-129 466.8 507 59.4
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 4.3e-128 463.0 677 65.9
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 2.1e-127 460.7 519 61.1
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 4.7e-127 459.5 500 59.6
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 1.1e-126 458.4 686 65.2
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.4e-126 458.0 770 56.5
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.8e-126 457.6 508 53.5
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 4.0e-126 456.4 809 60.7
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.9e-126 455.3 365 72.9
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 1.2e-125 454.9 772 63.0
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.5e-125 454.5 472 61.4
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.6e-125 453.8 533 54.6
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 3.4e-125 453.4 509 58.5
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.3e-124 451.4 761 63.5
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.8e-124 449.9 503 54.5
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.1e-123 448.4 500 53.6
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 5.4e-123 446.0 556 80.8
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 9.2e-123 445.3 444 61.9
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.2e-122 444.9 465 62.2
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.1e-122 444.1 465 62.4
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 6.0e-122 442.6 503 57.7
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 6.0e-122 442.6 503 57.7
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.7e-121 441.0 725 65.9
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.1e-120 438.3 532 55.8
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.1e-120 438.3 466 59.7
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 2.1e-119 434.1 553 77.4
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 8.1e-119 432.2 530 56.2
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 8.1e-119 432.2 503 57.1
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 1.8e-118 431.0 419 66.8
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 2.4e-118 430.6 450 62.4
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.2e-117 428.3 449 61.5
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 1.5e-117 427.9 498 56.6
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 1.7e-116 424.5 449 62.4
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 3.8e-116 423.3 498 56.4
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 3.8e-116 423.3 540 78.9
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.4e-115 421.4 407 63.9
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 2.3e-113 414.1 360 70.6
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 3.3e-112 410.2 595 68.4
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 1.3e-111 408.3 495 56.8
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 3.6e-111 406.8 502 55.8
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 1.2e-106 391.7 338 71.9
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 2.1e-106 391.0 677 64.7
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 2.5e-104 384.0 330 70.3
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 9.6e-104 382.1 357 65.3
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.4e-102 378.3 440 59.1
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 6.9e-102 375.9 440 58.9
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 3.7e-95 353.6 374 61.2
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 1.0e-81 308.9 529 46.5
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 8.8e-81 305.8 517 39.5
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 4.2e-75 287.0 201 67.2
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.2e-63 246.1 206 59.2
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 8.5e-60 236.1 507 34.9
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 7.0e-46 189.9 410 36.3
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 7.7e-45 186.4 377 42.7
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 5.6e-35 153.7 372 41.1
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 2.6e-24 118.2 174 36.8
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 5.8e-24 117.1 142 46.5
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 4.9e-23 114.0 197 58.4
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 7.1e-22 110.2 78 66.7
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 9.2e-22 109.8 61 83.6
vmacro05905 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.4e-08 64.7 43 67.4
Cpa.g.sc130.59 Carica papaya HOM05D006844 ORTHO05D008504 4.2e-06 57.8 42 73.8
PSO017G4104 Papaver somniferum HOM05D000001 ORTHO05D000003 5.4e-06 57.4 149 24.2
PSO478G3891 Papaver somniferum HOM05D000001 ORTHO05D000003 9.3e-06 56.6 149 24.2


User provided reference genes

Program Settings