Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 1.7e-64 249.2 129 100.0
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 1.9e-39 166.0 129 68.2
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 4.4e-20 101.7 145 48.3
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 4.1e-18 95.1 146 43.2
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 1.0e-16 90.5 146 42.5
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 3.3e-15 85.5 154 40.9
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 9.5e-15 84.0 77 62.3
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 1.6e-14 83.2 159 39.6
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 2.1e-14 82.8 92 53.3
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 2.1e-14 82.8 92 53.3
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 4.7e-14 81.6 158 41.8
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 1.1e-13 80.5 159 39.0
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 1.8e-13 79.7 150 39.3
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.3e-13 79.3 143 41.3
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 4.0e-13 78.6 96 47.9
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.2e-12 77.0 147 38.1
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 2.0e-12 76.3 144 41.0
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 2.6e-12 75.9 148 41.9
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 4.4e-12 75.1 147 38.1
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 1.3e-11 73.6 145 37.2
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 2.9e-11 72.4 145 35.9
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 2.9e-11 72.4 140 40.7
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 3.7e-11 72.0 137 37.2
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 3.7e-11 72.0 130 38.5
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 4.9e-11 71.6 137 36.5
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 8.3e-11 70.9 81 49.4
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 1.1e-10 70.5 144 36.8
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.1e-10 70.5 140 40.0
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 1.1e-10 70.5 137 37.2
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.9e-10 69.7 55 67.3
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 1.9e-10 69.7 121 42.1
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 2.4e-10 69.3 137 36.5
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 5.4e-10 68.2 139 36.0
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 5.4e-10 68.2 88 44.3
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 5.4e-10 68.2 153 39.2
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 7.0e-10 67.8 73 52.1
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 7.0e-10 67.8 148 37.2
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 9.2e-10 67.4 136 38.2
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 2.0e-09 66.2 57 64.9
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 3.5e-09 65.5 76 56.6
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 3.5e-09 65.5 66 56.1
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 3.5e-09 65.5 91 47.3
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 4.6e-09 65.1 83 45.8
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 6.0e-09 64.7 84 48.8
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 6.0e-09 64.7 56 60.7
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 1.3e-08 63.5 120 37.5
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 1.3e-08 63.5 75 49.3
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 2.3e-08 62.8 129 38.0
Lalb_Chr24g0401951 Lupinus albus HOM05D008192 ORTHO05D010301 2.3e-08 62.8 112 37.5
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 2.3e-08 62.8 144 33.3
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 2.3e-08 62.8 60 58.3
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 3.0e-08 62.4 81 45.7
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 3.0e-08 62.4 83 42.2
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 3.0e-08 62.4 83 42.2
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 3.0e-08 62.4 83 45.8
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 3.9e-08 62.0 150 38.0
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 6.6e-08 61.2 54 63.0
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 6.6e-08 61.2 81 45.7
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 8.6e-08 60.8 138 35.5
VMungo0647G0321 Vigna mungo HOM05D008192 ORTHO05D010301 1.1e-07 60.5 133 36.1
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 1.5e-07 60.1 75 48.0
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 1.5e-07 60.1 64 50.0
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 1.9e-07 59.7 146 35.6
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 2.5e-07 59.3 85 44.7
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 4.3e-07 58.5 88 40.9
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 5.6e-07 58.2 58 55.2
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 5.6e-07 58.2 81 42.0
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 5.6e-07 58.2 60 58.3
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 7.3e-07 57.8 99 39.4
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 7.3e-07 57.8 53 58.5
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 9.5e-07 57.4 83 41.0
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 9.5e-07 57.4 44 65.9
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 1.2e-06 57.0 67 49.3
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 1.6e-06 56.6 105 35.2
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.6e-06 56.6 69 46.4
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 1.6e-06 56.6 101 38.6
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 1.6e-06 56.6 77 41.6
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 1.6e-06 56.6 60 53.3
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 1.6e-06 56.6 60 53.3
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 1.6e-06 56.6 68 45.6
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 2.1e-06 56.2 83 41.0
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 2.1e-06 56.2 73 45.2
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 2.8e-06 55.8 76 42.1
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.8e-06 55.8 57 52.6
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 2.8e-06 55.8 104 38.5
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 2.8e-06 55.8 77 42.9
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 3.6e-06 55.5 96 37.5
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 3.6e-06 55.5 58 51.7
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 3.6e-06 55.5 66 48.5
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 4.7e-06 55.1 106 34.9
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 4.7e-06 55.1 74 45.9
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 6.2e-06 54.7 72 47.2
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 6.2e-06 54.7 78 42.3
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 6.2e-06 54.7 69 44.9
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 6.2e-06 54.7 81 42.0
arahy.Tifrunner.gnm1.ann1.XVGB1U Arachis hypogaea HOM05D008192 ORTHO05D010301 8.1e-06 54.3 101 37.6


User provided reference genes

Program Settings