Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 5.2e-165 584.3 297 100.0
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 5.6e-127 458.0 296 77.7
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 9.5e-127 457.2 296 77.7
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 8.3e-123 444.1 293 76.5
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 3.2e-122 442.2 292 76.4
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 3.5e-121 438.7 301 74.8
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 4.6e-121 438.3 292 75.7
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 3.0e-120 435.6 298 73.8
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 8.6e-120 434.1 301 73.4
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 1.6e-118 429.9 297 75.1
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 4.0e-117 425.2 292 73.6
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 5.2e-117 424.9 306 72.2
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 8.9e-117 424.1 303 73.6
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 1.5e-116 423.3 291 70.8
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 4.4e-116 421.8 300 73.0
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 7.5e-116 421.0 267 78.7
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 2.2e-115 419.5 300 73.0
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 2.2e-115 419.5 300 73.0
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 3.2e-114 415.6 284 72.5
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 1.6e-113 413.3 279 75.3
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 2.7e-113 412.5 300 70.7
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 2.7e-113 412.5 299 71.6
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 2.7e-113 412.5 292 72.9
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.0e-112 410.6 276 73.2
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.3e-112 410.2 282 73.0
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 6.6e-112 407.9 283 71.4
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 1.1e-111 407.1 286 71.7
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 1.5e-111 406.8 260 78.1
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.5e-111 406.0 282 72.3
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 3.3e-111 405.6 299 69.9
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 9.5e-111 404.1 285 69.1
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 1.6e-110 403.3 287 71.4
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 2.1e-110 402.9 295 67.8
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 6.2e-110 401.4 299 69.6
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 1.8e-109 399.8 283 69.3
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.1e-109 399.1 283 69.3
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 4.0e-109 398.7 297 69.7
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 6.8e-109 397.9 287 69.7
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.2e-108 397.1 291 68.7
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 5.8e-108 394.8 281 72.2
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 5.8e-108 394.8 286 70.3
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 5.8e-108 394.8 265 73.6
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 7.6e-108 394.4 298 68.1
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.1e-106 390.6 251 74.1
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 1.4e-106 390.2 281 70.8
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 4.2e-106 388.7 297 67.7
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 5.4e-106 388.3 253 75.9
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 5.4e-106 388.3 253 75.9
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 9.2e-106 387.5 291 67.7
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.6e-105 386.7 274 69.7
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.0e-104 384.0 302 66.6
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 1.0e-104 384.0 295 66.8
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 1.0e-104 384.0 295 66.8
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 1.0e-104 384.0 295 66.8
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.0e-104 384.0 218 85.3
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.0e-104 384.0 301 66.4
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 3.9e-104 382.1 305 65.2
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 3.9e-104 382.1 246 74.4
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 3.9e-104 382.1 237 77.6
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 5.1e-104 381.7 302 67.5
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 8.7e-104 380.9 253 73.5
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 3.3e-103 379.0 302 66.2
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 4.3e-103 378.6 309 62.8
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 5.6e-103 378.3 291 68.0
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 7.3e-103 377.9 247 75.7
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 7.3e-103 377.9 293 65.5
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 3.6e-102 375.6 299 67.2
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 4.7e-102 375.2 285 66.3
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 6.2e-102 374.8 285 65.6
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 3.1e-101 372.5 299 64.9
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 9.0e-101 370.9 296 63.2
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 5.8e-100 368.2 308 62.0
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 1.4e-98 363.6 277 66.1
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 2.1e-97 359.8 261 67.8
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 4.6e-97 358.6 267 67.4
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 6.6e-96 354.8 283 62.9
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 1.9e-95 353.2 313 61.0
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 4.3e-95 352.1 313 60.7
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 7.3e-95 351.3 350 57.4
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 3.6e-94 349.0 259 66.4
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 1.8e-93 346.7 271 65.7
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 3.1e-93 345.9 309 59.2
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 5.3e-93 345.1 234 71.8
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 6.9e-93 344.7 261 66.3
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 2.4e-90 336.3 267 67.0
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 2.4e-90 336.3 211 74.4
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.4e-90 335.1 252 67.9
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 4.6e-89 332.0 298 60.1
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 5.1e-88 328.6 259 64.5
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 2.5e-87 326.2 242 68.6
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 9.6e-87 324.3 251 66.5
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.8e-85 320.1 272 62.1
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.2e-84 317.4 232 70.3
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.1e-80 302.0 251 63.3
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 8.7e-80 301.2 267 60.7
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 8.4e-75 284.6 323 50.8
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 1.1e-74 284.3 183 72.1
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 2.5e-74 283.1 158 88.6
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 9.3e-74 281.2 287 55.1
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 5.1e-72 275.4 315 50.2
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.1e-71 274.2 189 72.0
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.1e-71 274.2 283 54.8
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 7.7e-68 261.5 250 53.2
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 3.6e-57 226.1 176 66.5
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.4e-45 187.6 101 83.2
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 2.5e-42 176.8 175 53.1
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 3.1e-37 159.8 213 41.3
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 5.0e-35 152.5 107 66.4
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 4.7e-25 119.4 196 35.7
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.0e-11 75.1 50 74.0
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 2.5e-10 70.5 101 39.6
ATR0033G026 Amborella trichopoda HOM05D002933 ORTHO05D007742 4.9e-06 56.2 254 23.2


User provided reference genes

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