Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 7.2e-74 280.4 135 100.0
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 2.9e-62 241.9 129 88.4
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 1.1e-61 240.0 129 87.6
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 5.4e-61 237.7 126 84.9
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.2e-60 236.5 129 84.5
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.6e-60 234.6 130 84.6
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 5.9e-60 234.2 126 83.3
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 7.8e-60 233.8 130 84.6
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.0e-59 233.4 130 83.8
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 1.3e-59 233.0 128 83.6
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 1.7e-59 232.6 128 82.0
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.7e-59 232.6 128 82.8
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 5.0e-59 231.1 128 82.8
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 8.6e-59 230.3 130 83.8
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 8.6e-59 230.3 130 83.1
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 1.9e-58 229.2 126 82.5
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 3.3e-58 228.4 130 81.5
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 3.3e-58 228.4 126 84.1
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 5.6e-58 227.6 129 81.4
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 5.6e-58 227.6 128 80.5
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 5.6e-58 227.6 128 83.6
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 7.3e-58 227.3 129 82.2
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 7.3e-58 227.3 129 82.2
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 7.3e-58 227.3 129 82.2
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 1.2e-57 226.5 130 82.3
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 1.6e-57 226.1 129 79.1
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.1e-57 225.7 129 78.3
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 4.7e-57 224.6 128 79.7
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 6.2e-57 224.2 126 81.0
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 6.2e-57 224.2 126 81.0
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 8.0e-57 223.8 129 81.4
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 8.0e-57 223.8 165 67.3
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 1.0e-56 223.4 132 77.3
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.4e-56 223.0 129 78.3
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 1.4e-56 223.0 129 76.7
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 1.4e-56 223.0 129 76.7
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.8e-56 222.6 126 79.4
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 1.8e-56 222.6 132 76.5
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 1.8e-56 222.6 138 74.6
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 2.3e-56 222.2 128 78.9
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 2.3e-56 222.2 132 75.8
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 2.3e-56 222.2 130 80.8
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 8.9e-56 220.3 129 77.5
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 1.2e-55 219.9 128 77.3
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.5e-55 219.5 128 78.9
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 2.0e-55 219.2 128 77.3
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 2.6e-55 218.8 132 74.2
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 3.4e-55 218.4 132 75.0
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 3.4e-55 218.4 132 75.0
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 3.4e-55 218.4 132 75.0
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 3.4e-55 218.4 132 75.0
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 3.4e-55 218.4 132 75.0
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 3.4e-55 218.4 132 75.0
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 3.4e-55 218.4 128 78.9
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 4.4e-55 218.0 126 77.8
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 4.4e-55 218.0 127 81.1
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 5.8e-55 217.6 128 78.9
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 9.8e-55 216.9 128 76.6
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 9.8e-55 216.9 129 76.7
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 1.7e-54 216.1 126 77.8
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 1.7e-54 216.1 126 77.8
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 1.7e-54 216.1 129 77.5
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 1.7e-54 216.1 129 77.5
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 2.2e-54 215.7 129 77.5
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.7e-54 214.9 128 77.3
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 3.7e-54 214.9 128 75.0
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 6.4e-54 214.2 128 76.6
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 8.3e-54 213.8 124 77.4
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 8.3e-54 213.8 129 76.0
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 8.3e-54 213.8 123 78.0
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 1.4e-53 213.0 128 75.8
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 1.4e-53 213.0 124 77.4
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 4.1e-53 211.5 133 72.9
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 5.4e-53 211.1 126 75.4
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 7.0e-53 210.7 128 73.4
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.2e-52 209.9 125 76.8
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 1.6e-52 209.5 126 76.2
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 2.7e-52 208.8 126 75.4
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 4.6e-52 208.0 128 72.7
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 6.0e-52 207.6 129 73.6
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 7.8e-52 207.2 125 73.6
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.0e-51 206.8 120 80.8
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 3.9e-51 204.9 131 69.5
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 6.6e-51 204.1 129 72.9
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 1.1e-50 203.4 133 69.9
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 1.9e-50 202.6 127 68.5
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 3.6e-49 198.4 128 71.9
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 3.6e-49 198.4 128 69.5
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 8.1e-49 197.2 126 70.6
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.2e-47 193.4 126 65.9
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 1.2e-47 193.4 123 74.0
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 1.1e-45 186.8 124 66.9
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.4e-45 186.4 126 63.5
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 5.4e-45 184.5 113 75.2
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.6e-44 183.0 126 64.3
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 3.0e-43 178.7 131 61.1
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 6.6e-43 177.6 127 63.8
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 2.9e-38 162.2 124 58.1
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 2.9e-38 162.2 114 64.0
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 6.0e-36 154.5 92 79.3
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 1.3e-35 153.3 129 49.6
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 6.2e-33 144.4 131 50.4
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.4e-32 143.3 131 51.1
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 4.0e-32 141.7 116 55.2
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 8.9e-32 140.6 157 47.8
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 2.4e-29 132.5 85 75.3
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 3.5e-28 128.6 74 78.4
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 6.0e-28 127.9 79 77.2
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 1.3e-27 126.7 125 49.6
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 2.3e-19 99.4 63 69.8
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 2.3e-19 99.4 52 78.8
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 3.0e-19 99.0 55 74.5
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 1.5e-18 96.7 53 77.4
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 3.3e-18 95.5 54 72.2
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 4.8e-17 91.7 53 69.8
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.6e-09 66.6 43 69.8
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.1e-09 66.2 43 69.8
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 2.0e-07 59.7 40 72.5


User provided reference genes

Program Settings