Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 3.7e-84 314.7 143 100.0
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 9.7e-61 236.9 144 76.4
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 2.2e-60 235.7 144 75.7
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 6.3e-60 234.2 143 75.5
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 2.4e-59 232.3 143 73.4
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 1.2e-58 229.9 144 72.2
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 4.5e-58 228.0 144 73.6
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 1.7e-57 226.1 143 72.0
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 6.5e-57 224.2 143 69.2
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 1.9e-56 222.6 145 71.0
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 3.2e-56 221.9 144 71.5
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 3.2e-56 221.9 144 71.5
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 5.5e-56 221.1 143 70.6
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 5.5e-56 221.1 142 72.5
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 5.5e-56 221.1 144 69.4
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 7.2e-56 220.7 145 70.3
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.6e-55 219.5 143 68.5
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 2.7e-55 218.8 146 69.2
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.6e-55 218.4 144 69.4
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 3.6e-55 218.4 143 69.2
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 3.6e-55 218.4 143 68.5
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 8.0e-55 217.2 143 70.6
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 8.0e-55 217.2 143 70.6
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 3.0e-54 215.3 110 81.8
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.0e-54 214.9 143 68.5
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 8.8e-54 213.8 143 69.9
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.2e-53 213.4 146 68.5
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 2.0e-53 212.6 143 70.6
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 2.6e-53 212.2 143 68.5
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 2.6e-53 212.2 143 67.8
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 3.3e-53 211.8 143 69.2
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 4.4e-53 211.5 143 65.7
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 5.7e-53 211.1 110 80.0
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.7e-53 211.1 120 75.8
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 7.5e-53 210.7 143 70.6
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 7.5e-53 210.7 143 66.4
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 9.7e-53 210.3 143 65.7
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 9.7e-53 210.3 123 72.4
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.3e-52 209.9 145 66.9
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.8e-52 208.8 143 66.4
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 8.2e-52 207.2 145 64.8
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 8.2e-52 207.2 144 66.0
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 1.1e-51 206.8 143 66.4
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 4.1e-51 204.9 143 69.2
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 7.0e-51 204.1 105 77.1
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 7.0e-51 204.1 143 67.8
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 7.0e-51 204.1 151 64.9
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 7.0e-51 204.1 143 65.7
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 7.0e-51 204.1 143 65.7
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.7e-50 202.2 140 69.3
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 3.5e-50 201.8 150 61.3
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 4.5e-50 201.4 143 65.7
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 5.9e-50 201.1 143 62.9
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 7.7e-50 200.7 147 61.9
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.3e-49 199.9 143 62.2
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 1.3e-49 199.9 150 60.7
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-49 199.9 143 62.2
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-49 199.9 143 62.2
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.3e-49 199.9 143 62.2
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.3e-49 199.9 143 62.2
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 1.7e-49 199.5 142 64.8
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 2.9e-49 198.7 147 61.2
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 2.9e-49 198.7 147 61.2
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.5e-48 195.7 143 65.7
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 2.5e-48 195.7 143 66.4
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 7.2e-48 194.1 143 64.3
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 9.4e-48 193.7 143 62.9
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 1.2e-47 193.4 143 65.0
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 1.2e-47 193.4 119 73.1
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 2.7e-47 192.2 144 59.0
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 2.7e-47 192.2 132 62.1
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 2.7e-47 192.2 143 58.0
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.6e-47 191.8 156 62.2
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 6.1e-47 191.0 147 61.2
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 8.0e-47 190.7 145 62.1
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 2.3e-46 189.1 184 52.2
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 6.8e-46 187.6 144 59.7
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 6.8e-46 187.6 158 57.6
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 8.8e-46 187.2 143 60.1
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 8.8e-46 187.2 143 59.4
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 1.2e-45 186.8 162 55.6
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.2e-45 186.8 91 86.8
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.5e-45 186.4 143 59.4
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 1.3e-44 183.3 143 56.6
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 1.3e-44 183.3 126 68.3
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.7e-44 183.0 110 68.2
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 2.8e-44 182.2 150 63.3
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 3.7e-44 181.8 144 56.9
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 2.4e-43 179.1 163 54.6
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 7.0e-43 177.6 145 58.6
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.7e-41 172.9 147 53.7
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 2.3e-41 172.6 109 63.3
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 2.3e-41 172.6 109 63.3
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 6.5e-41 171.0 184 49.5
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.9e-40 169.5 111 62.2
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 5.5e-40 167.9 143 53.1
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 7.2e-40 167.5 127 62.2
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 9.5e-40 167.2 78 89.7
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.4e-38 163.3 117 70.1
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.2e-37 160.2 118 55.1
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.5e-37 159.8 110 62.7
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 2.0e-37 159.5 111 62.2
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 7.5e-37 157.5 78 80.8
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 1.1e-35 153.7 99 74.7
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 9.2e-35 150.6 90 75.6
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.6e-34 149.8 132 56.8
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 3.5e-34 148.7 117 62.4
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 5.6e-32 141.4 93 69.9
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 2.6e-29 132.5 101 67.3
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 5.8e-29 131.3 93 69.9
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.7e-28 128.6 100 63.0
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.4e-27 126.7 99 61.6
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.4e-27 126.7 99 61.6
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.8e-27 126.3 100 63.0
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.6e-26 123.2 108 63.0
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 8.9e-22 107.5 90 48.9
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.0e-21 106.3 102 55.9
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 6.4e-20 101.3 99 50.5
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.2e-13 80.5 69 52.2
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 9.9e-13 77.4 38 86.8
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 1.1e-08 63.9 68 48.5
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 6.2e-07 58.2 33 69.7
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 1.8e-06 56.6 70 45.7


User provided reference genes

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