Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G123021 Manihot esculenta HOM05D000003 ORTHO05D000167 1.6e-64 249.2 120 100.0
Manes.17G011401 Manihot esculenta HOM05D000003 ORTHO05D000167 5.7e-46 187.6 119 75.6
Manes.12G143650 Manihot esculenta HOM05D000003 ORTHO05D000167 8.2e-45 183.7 122 72.1
Manes.05G188350 Manihot esculenta HOM05D000003 ORTHO05D000004 1.4e-39 166.4 122 68.0
Manes.10G106150 Manihot esculenta HOM05D000003 ORTHO05D000004 1.8e-39 166.0 109 73.4
Manes.15G179404 Manihot esculenta HOM05D000003 ORTHO05D000167 7.4e-38 160.6 122 67.2
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 2.8e-37 158.7 122 63.1
Manes.12G101201 Manihot esculenta HOM05D000003 ORTHO05D000004 8.2e-37 157.1 122 63.1
Manes.18G125550 Manihot esculenta HOM05D000003 ORTHO05D000167 1.9e-33 146.0 114 62.3
Manes.12G097720 Manihot esculenta HOM05D000003 ORTHO05D000167 4.1e-28 128.3 98 61.2
Manes.10G073050 Manihot esculenta HOM05D000003 ORTHO05D000167 7.7e-27 124.0 112 55.4
Manes.10G125312 Manihot esculenta HOM05D000003 ORTHO05D000167 6.1e-24 114.4 98 57.1
Manes.09G121201 Manihot esculenta HOM05D000003 ORTHO05D000167 1.0e-23 113.6 83 63.9
Manes.15G185801 Manihot esculenta HOM05D000003 ORTHO05D000167 1.7e-21 106.3 119 52.1
Manes.16G107751 Manihot esculenta HOM05D000003 ORTHO05D000004 5.9e-19 97.8 119 47.1
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 5.7e-14 81.3 124 34.7
Manes.10G114432 Manihot esculenta HOM05D020758 ORTHO05D000167 8.3e-13 77.4 98 36.7
Manes.11G070850 Manihot esculenta HOM05D020758 ORTHO05D000167 8.3e-13 77.4 96 37.5
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 1.1e-12 77.0 123 39.0
CANSAT21G2025 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-11 73.6 126 34.9
CANSAT64G1882 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-11 72.4 125 35.2
CANSAT78G2353 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-11 72.0 124 34.7
CANSAT01G0940 Cannabis sativa HOM05D000003 ORTHO05D000167 7.7e-11 70.9 125 32.8
Manes.10G063301 Manihot esculenta HOM05D000003 ORTHO05D000167 7.7e-11 70.9 122 31.1
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-10 70.5 127 35.4
CANSAT11G0460 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-10 70.1 126 33.3
CANSAT64G1867 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-10 70.1 128 32.0
CANSAT80G0272 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-10 70.1 125 36.0
CANSAT78G2409 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-10 69.7 126 33.3
CANSAT01G1635 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-10 69.3 125 34.4
CANSAT64G0360 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-10 69.3 127 33.9
Lj9P419T24 Lonicera japonica HOM05D000003 ORTHO05D000167 2.9e-10 68.9 122 32.8
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 2.9e-10 68.9 126 37.3
CANSAT21G0502 Cannabis sativa HOM05D000003 ORTHO05D000167 3.8e-10 68.6 125 34.4
CANSAT21G0362 Cannabis sativa HOM05D000003 ORTHO05D000167 6.6e-10 67.8 128 34.4
CANSAT64G0681 Cannabis sativa HOM05D000003 ORTHO05D000167 6.6e-10 67.8 126 31.0
CANSAT80G2317 Cannabis sativa HOM05D000003 ORTHO05D000167 6.6e-10 67.8 125 32.0
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 8.6e-10 67.4 126 36.5
CANSAT64G1939 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-09 67.0 126 31.0
CANSAT78G2124 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-09 66.6 126 34.1
RcHm_v2.0_Chr4g0415961 Rosa chinensis HOM05D000003 ORTHO05D000167 1.5e-09 66.6 120 32.5
CANSAT35G0331 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-09 66.2 126 30.2
CANSAT56G0876 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-09 66.2 126 31.0
CANSAT56G2299 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-09 66.2 126 32.5
CANSAT78G0165 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-09 66.2 127 33.1
CANSAT78G0193 Cannabis sativa HOM05D000003 ORTHO05D000167 1.9e-09 66.2 126 31.7
CANSAT01G1815 Cannabis sativa HOM05D000003 ORTHO05D000167 2.5e-09 65.9 126 30.2
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-09 65.9 128 31.2
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 4.2e-09 65.1 105 33.3
CANSAT54G2591 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-09 65.1 125 31.2
CANSAT56G2069 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-09 65.1 126 29.4
Manes.02G029101 Manihot esculenta HOM05D000003 ORTHO05D000004 4.2e-09 65.1 128 34.4
CANSAT56G2110 Cannabis sativa HOM05D000003 ORTHO05D000167 5.5e-09 64.7 126 30.2
CANSAT80G0039 Cannabis sativa HOM05D000003 ORTHO05D000167 5.5e-09 64.7 124 33.1
Lj1P809T7 Lonicera japonica HOM05D000003 ORTHO05D000167 5.5e-09 64.7 104 37.5
CANSAT01G2797 Cannabis sativa HOM05D000003 ORTHO05D000167 7.2e-09 64.3 123 31.7
CANSAT78G1753 Cannabis sativa HOM05D000003 ORTHO05D000167 7.2e-09 64.3 124 33.1
Peaxi162Scf00139g10014 Petunia axillaris HOM05D000003 ORTHO05D000167 7.2e-09 64.3 123 28.5
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-09 63.9 125 32.0
CANSAT25G1969 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-09 63.9 126 33.3
CANSAT35G1937 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-09 63.9 125 30.4
CANSAT54G0904 Cannabis sativa HOM05D000003 ORTHO05D000167 9.5e-09 63.9 126 28.6
Lj4C842T3 Lonicera japonica HOM05D000003 ORTHO05D000167 9.5e-09 63.9 127 33.1
CANSAT56G2204 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-08 63.5 125 30.4
CANSAT56G2961 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-08 63.5 126 27.8
CANSAT64G0538 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-08 63.5 129 31.0
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 1.2e-08 63.5 104 36.5
CANSAT54G1953 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-08 63.2 128 31.2
CANSAT64G0950 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-08 63.2 126 28.6
Lj1C16T17 Lonicera japonica HOM05D011238 ORTHO05D004093 1.6e-08 63.2 99 30.3
SHI06519 Sapria himalayana HOM05D000003 ORTHO05D000167 2.1e-08 62.8 120 32.5
CANSAT25G3689 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-08 62.4 112 30.4
CANSAT54G1529 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-08 62.4 107 29.0
CANSAT54G1600 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-08 62.4 124 33.1
CANSAT11G1435 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-08 62.0 125 31.2
CANSAT56G0579 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-08 62.0 127 31.5
CANSAT80G0435 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-08 62.0 126 29.4
BolC8t50384H Brassica oleracea HOM05D000003 ORTHO05D001091 4.7e-08 61.6 105 29.5
CANSAT11G0945 Cannabis sativa HOM05D000003 ORTHO05D000167 4.7e-08 61.6 122 27.0
CANSAT25G3211 Cannabis sativa HOM05D000003 ORTHO05D000167 4.7e-08 61.6 127 33.9
CANSAT56G1507 Cannabis sativa HOM05D000003 ORTHO05D000167 6.1e-08 61.2 127 33.1
CANSAT80G2601 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-08 61.2 126 29.4
Manes.15G193101 Manihot esculenta HOM05D000003 ORTHO05D000167 6.1e-08 61.2 119 31.9
CANSAT01G0864 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-08 60.8 126 28.6
CANSAT11G1896 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-08 60.8 126 27.8
CANSAT25G0043 Cannabis sativa HOM05D000003 ORTHO05D000004 8.0e-08 60.8 125 32.8
CANSAT56G0133 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-08 60.8 126 29.4
CANSAT80G2437 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-08 60.8 103 34.0
Nitab4.5_0006377g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000167 1.0e-07 60.5 126 28.6
QL08p048475 Quercus lobata HOM05D000163 ORTHO05D013581 1.0e-07 60.5 93 32.3
Atru.chr7.1272 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-07 60.1 122 30.3
CANSAT11G0192 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-07 60.1 128 31.2
CANSAT21G1748 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-07 60.1 127 32.3
CANSAT35G0312 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-07 60.1 127 32.3
CANSAT56G4191 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-07 60.1 126 28.6
Manes.14G023575 Manihot esculenta HOM05D000003 ORTHO05D000167 1.4e-07 60.1 122 33.6
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 1.4e-07 60.1 124 26.6
CANSAT01G2496 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-07 59.7 103 35.0
CANSAT35G1027 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-07 59.7 125 31.2
CANSAT64G1116 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-07 59.7 126 29.4
MD08G1177900 Malus domestica HOM05D000003 ORTHO05D000167 1.8e-07 59.7 115 31.3
CANSAT56G1530 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-07 59.3 123 29.3
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 2.3e-07 59.3 97 35.1
QL10p052676 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-07 59.3 97 32.0
CANSAT01G1191 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-07 58.9 126 28.6
CANSAT01G2140 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-07 58.9 126 28.6
CANSAT11G0573 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-07 58.9 126 27.8
CANSAT25G1478 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-07 58.9 125 29.6
CANSAT54G1690 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-07 58.9 125 27.2
CANSAT56G1334 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-07 58.9 125 27.2
CANSAT56G4436 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-07 58.9 126 28.6
Lj5P248T56 Lonicera japonica HOM05D000003 ORTHO05D000167 3.0e-07 58.9 103 35.9
SHI30067 Sapria himalayana HOM05D000003 ORTHO05D000167 3.0e-07 58.9 120 32.5
CANSAT01G0458 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-07 58.5 126 27.8
CANSAT11G0149 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-07 58.5 126 27.8
CANSAT54G1379 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-07 58.5 126 27.8
CANSAT56G1927 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-07 58.5 126 31.7
CANSAT64G0416 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-07 58.5 98 30.6
CANSAT64G0475 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-07 58.5 126 32.5
CANSAT64G2795 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-07 58.5 97 27.8
RcHm_v2.0_Chr7g0227851 Rosa chinensis HOM05D008833 ORTHO05D000167 4.0e-07 58.5 122 25.4
CANSAT01G1451 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-07 58.2 125 28.8
CANSAT11G0809 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-07 58.2 126 27.8
CANSAT54G0464 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-07 58.2 125 29.6
CANSAT54G2655 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-07 58.2 128 32.0
CANSAT56G1970 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-07 58.2 98 33.7
Medtr2g102247 Medicago truncatula HOM05D000147 ORTHO05D004093 5.2e-07 58.2 97 29.9
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 6.8e-07 57.8 97 34.0
CANSAT01G0905 Cannabis sativa HOM05D000003 ORTHO05D000167 8.9e-07 57.4 127 31.5
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 1.2e-06 57.0 97 32.0
TPR.G3250 Trifolium pratense HOM05D011238 ORTHO05D004093 1.2e-06 57.0 99 30.3
CANSAT01G1250 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-06 56.6 128 30.5
CANSAT01G2325 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-06 56.6 102 33.3
CANSAT56G3498 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-06 56.6 126 29.4
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 56.6 100 31.0
QL05p017790 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-06 56.6 94 30.9
Solyc03g078170.1 Solanum lycopersicum HOM05D000003 ORTHO05D000167 1.5e-06 56.6 120 27.5
Atru.ctg727.2 Acer truncatum HOM05D002863 ORTHO05D009913 2.0e-06 56.2 126 28.6
CANSAT35G0384 Cannabis sativa HOM05D000003 ORTHO05D000167 2.0e-06 56.2 127 31.5
CANSAT54G0934 Cannabis sativa HOM05D000003 ORTHO05D000167 2.0e-06 56.2 128 30.5
Nn8g41081 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.0e-06 56.2 121 26.4
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 2.0e-06 56.2 98 30.6
CANSAT01G1093 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-06 55.8 126 31.0
CANSAT11G0285 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-06 55.8 126 31.7
CANSAT56G2145 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-06 55.8 127 29.1
CANSAT80G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-06 55.8 131 26.7
FvH4_3g14382 Fragaria vesca HOM05D000003 ORTHO05D006737 2.6e-06 55.8 99 32.3
FvH4_6g21812 Fragaria vesca HOM05D012422 ORTHO05D000167 2.6e-06 55.8 95 32.6
Manes.15G187851 Manihot esculenta HOM05D020758 ORTHO05D000167 2.6e-06 55.8 96 33.3
QL03p051530 Quercus lobata HOM05D000003 ORTHO05D000167 2.6e-06 55.8 110 27.3
CANSAT01G1541 Cannabis sativa HOM05D000003 ORTHO05D000167 3.4e-06 55.5 109 35.8
CANSAT11G0956 Cannabis sativa HOM05D000003 ORTHO05D000167 3.4e-06 55.5 126 30.2
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-06 55.5 128 28.1
CANSAT64G2500 Cannabis sativa HOM05D000003 ORTHO05D000167 3.4e-06 55.5 129 29.5
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 3.4e-06 55.5 93 32.3
Lju470C9T6 Lonicera japonica HOM05D000003 ORTHO05D000167 3.4e-06 55.5 110 31.8
Manes.16G025050 Manihot esculenta HOM05D000003 ORTHO05D000167 3.4e-06 55.5 100 37.0
TPR.G16970 Trifolium pratense HOM05D011238 ORTHO05D004093 3.4e-06 55.5 99 29.3
CANSAT25G2774 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-06 55.1 126 28.6
FvH4_1g26014 Fragaria vesca HOM05D000003 ORTHO05D000006 4.4e-06 55.1 120 25.8
Lj6P602T49 Lonicera japonica HOM05D000003 ORTHO05D000167 4.4e-06 55.1 124 30.6
Medtr4g098780 Medicago truncatula HOM05D011238 ORTHO05D004093 4.4e-06 55.1 124 29.0
RcHm_v2.0_Chr4g0389021 Rosa chinensis HOM05D000003 ORTHO05D000167 4.4e-06 55.1 118 28.0
Atru.chr7.1911 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-06 54.7 127 26.8
CANSAT11G0785 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-06 54.7 124 28.2
CANSAT11G1043 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-06 54.7 121 29.8
CANSAT64G2339 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-06 54.7 106 24.5
FvH4_4g07171 Fragaria vesca HOM05D008833 ORTHO05D012679 5.7e-06 54.7 122 27.0
Medtr1g115485 Medicago truncatula HOM05D000072 ORTHO05D000026 5.7e-06 54.7 95 27.4
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 7.5e-06 54.3 107 28.0
AT2G34320 Arabidopsis thaliana HOM05D000003 ORTHO05D001091 7.5e-06 54.3 101 25.7
CANSAT64G2778 Cannabis sativa HOM05D000003 ORTHO05D000167 7.5e-06 54.3 126 30.2
Atru.chr7.410 Acer truncatum HOM05D000003 ORTHO05D000004 9.8e-06 53.9 122 33.6
CANSAT54G0632 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-06 53.9 126 27.8
CANSAT80G0405 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-06 53.9 99 30.3
Lj8C336T5 Lonicera japonica HOM05D034148 ORTHO05D000167 9.8e-06 53.9 95 33.7


User provided reference genes

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