Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 4.7e-144 514.6 277 100.0
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.5e-94 350.1 218 84.4
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 2.0e-94 349.7 218 83.9
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 2.0e-94 349.7 218 83.9
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 2.0e-94 349.7 218 83.5
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 3.4e-94 349.0 218 83.9
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 2.2e-93 346.3 216 83.3
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 3.8e-93 345.5 218 82.6
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 6.4e-93 344.7 217 82.5
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.9e-92 343.2 217 82.5
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 4.2e-92 342.0 218 82.1
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.6e-91 340.1 217 81.1
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 2.1e-91 339.7 217 81.6
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.7e-91 339.3 275 69.8
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 3.5e-91 339.0 217 81.1
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 6.0e-91 338.2 217 82.0
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 6.0e-91 338.2 218 82.6
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 6.0e-91 338.2 218 80.7
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 2.3e-90 336.3 218 79.8
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 3.9e-90 335.5 218 81.2
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 5.1e-90 335.1 217 81.6
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 6.6e-90 334.7 218 80.3
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 8.7e-90 334.3 218 80.3
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 1.1e-89 334.0 216 79.2
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 1.5e-89 333.6 217 80.6
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 3.3e-89 332.4 218 79.8
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 3.3e-89 332.4 218 74.8
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 7.3e-89 331.3 227 77.5
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 2.1e-88 329.7 218 78.9
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 2.1e-88 329.7 218 79.4
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 4.8e-88 328.6 215 79.1
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 6.2e-88 328.2 215 78.6
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 6.2e-88 328.2 217 77.9
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 1.1e-87 327.4 217 78.3
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 2.4e-87 326.2 218 78.0
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 5.3e-87 325.1 218 78.0
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 6.9e-87 324.7 229 76.4
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 9.0e-87 324.3 216 79.2
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 9.0e-87 324.3 216 79.2
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 9.0e-87 324.3 216 79.2
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 9.0e-87 324.3 214 77.6
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 9.0e-87 324.3 217 79.7
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 9.0e-87 324.3 217 77.4
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 1.2e-86 323.9 219 78.5
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 2.0e-86 323.2 210 80.5
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 2.6e-86 322.8 217 77.9
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 2.6e-86 322.8 218 76.1
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 2.6e-86 322.8 218 76.1
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 3.4e-86 322.4 218 78.0
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 3.4e-86 322.4 217 76.0
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 7.6e-86 321.2 217 76.0
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 3.8e-85 318.9 215 79.1
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 4.9e-85 318.5 218 77.5
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 8.4e-85 317.8 217 77.0
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.1e-84 317.4 214 75.7
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 1.1e-84 317.4 217 77.0
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 3.2e-84 315.8 278 65.5
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 4.2e-84 315.5 215 74.9
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.7e-83 312.8 275 65.8
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 3.5e-83 312.4 217 74.7
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 1.3e-82 310.5 250 67.6
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.3e-82 309.7 240 68.8
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 5.1e-82 308.5 197 80.7
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 6.6e-82 308.1 215 74.4
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.5e-81 307.0 214 72.9
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.3e-81 305.8 218 75.7
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 4.3e-81 305.4 214 73.8
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 1.3e-80 303.9 218 72.0
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.6e-80 303.5 218 76.1
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 2.8e-80 302.8 215 74.4
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 4.8e-80 302.0 218 70.2
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 1.4e-79 300.4 218 68.8
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 6.9e-79 298.1 210 70.0
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.2e-78 297.4 203 76.8
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 2.6e-78 296.2 215 73.5
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 4.5e-78 295.4 185 83.2
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 7.6e-78 294.7 216 73.1
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 9.9e-78 294.3 218 68.3
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.7e-77 293.5 215 72.1
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 8.4e-77 291.2 218 67.9
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.4e-76 290.4 217 71.4
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 5.5e-76 288.5 216 68.5
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 5.5e-76 288.5 227 70.0
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 7.1e-76 288.1 218 67.4
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 7.1e-76 288.1 218 67.4
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 2.1e-75 286.6 218 67.0
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 2.1e-75 286.6 197 75.1
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 3.5e-75 285.8 218 67.0
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 3.5e-75 285.8 218 67.0
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 3.5e-75 285.8 218 67.0
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 3.5e-75 285.8 218 69.7
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 1.3e-72 277.3 184 78.3
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 3.7e-72 275.8 217 68.2
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.1e-71 274.2 217 68.7
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.1e-71 274.2 207 67.6
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 3.8e-69 265.8 206 66.0
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 4.9e-69 265.4 218 63.3
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 2.1e-67 260.0 201 66.7
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 5.3e-63 245.4 214 61.7
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 8.5e-61 238.0 212 61.8
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 8.5e-61 238.0 212 61.8
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 1.1e-60 237.7 211 56.9
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 1.2e-59 234.2 213 61.5
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 4.6e-59 232.3 212 61.3
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 8.2e-56 221.5 203 54.7
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 4.6e-51 205.7 213 52.1
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 8.2e-48 194.9 183 61.7
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 1.5e-46 190.7 139 70.5
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 1.0e-45 188.0 200 50.5
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 4.5e-38 162.5 210 49.0
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 1.5e-28 131.0 94 68.1
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.5e-28 130.2 157 52.9
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 3.2e-28 129.8 137 55.5
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 4.4e-17 92.8 194 30.4
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.1e-15 88.2 215 29.3
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 2.8e-11 73.6 218 28.9
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 5.4e-07 59.3 88 47.7
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 4.6e-06 56.2 35 74.3


User provided reference genes

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