Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 5.0e-63 244.2 118 100.0
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 9.5e-46 186.8 118 74.6
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 7.6e-35 150.6 118 62.7
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 1.3e-34 149.8 118 58.5
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 4.9e-34 147.9 96 74.0
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 2.4e-33 145.6 94 74.5
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 3.2e-33 145.2 117 59.0
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 5.4e-33 144.4 118 57.6
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 3.5e-32 141.7 120 57.5
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 4.6e-32 141.4 121 57.0
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 7.8e-32 140.6 118 56.8
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 1.7e-31 139.4 118 55.9
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 2.3e-31 139.0 120 56.7
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 2.3e-31 139.0 120 55.0
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 3.9e-31 138.3 120 55.0
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 6.6e-31 137.5 118 55.9
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 6.6e-31 137.5 121 57.0
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 6.6e-31 137.5 119 54.6
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 1.1e-30 136.7 121 56.2
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 1.1e-30 136.7 121 56.2
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 1.1e-30 136.7 121 55.4
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 1.1e-30 136.7 121 56.2
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 1.1e-30 136.7 121 56.2
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 1.1e-30 136.7 121 56.2
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 1.1e-30 136.7 121 56.2
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 1.1e-30 136.7 120 54.2
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 1.5e-30 136.3 120 55.8
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 2.5e-30 135.6 118 55.9
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 2.5e-30 135.6 121 56.2
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 3.3e-30 135.2 118 55.1
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 3.3e-30 135.2 121 55.4
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 4.3e-30 134.8 120 55.8
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 4.3e-30 134.8 118 53.4
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 5.6e-30 134.4 121 54.5
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 5.6e-30 134.4 121 54.5
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 5.6e-30 134.4 121 54.5
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 5.6e-30 134.4 120 53.3
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 5.6e-30 134.4 115 56.5
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 7.3e-30 134.0 121 54.5
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 7.3e-30 134.0 118 52.5
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 9.6e-30 133.7 121 54.5
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 9.6e-30 133.7 115 56.5
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 1.2e-29 133.3 124 51.6
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 1.6e-29 132.9 120 54.2
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 1.6e-29 132.9 118 53.4
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 2.8e-29 132.1 117 52.1
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 4.7e-29 131.3 121 56.2
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 6.2e-29 131.0 121 53.7
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 6.2e-29 131.0 118 55.1
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 8.1e-29 130.6 122 53.3
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 1.8e-28 129.4 115 55.7
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 2.4e-28 129.0 112 54.5
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 4.0e-28 128.3 115 54.8
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 5.2e-28 127.9 121 52.1
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 5.2e-28 127.9 118 52.5
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 5.2e-28 127.9 120 50.8
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 5.2e-28 127.9 121 54.5
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 8.9e-28 127.1 120 50.0
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 8.9e-28 127.1 120 50.8
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 1.2e-27 126.7 120 53.3
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 1.2e-27 126.7 120 53.3
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 1.2e-27 126.7 120 53.3
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 2.0e-27 125.9 120 50.0
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 2.0e-27 125.9 125 48.8
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 2.0e-27 125.9 112 52.7
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 2.6e-27 125.6 120 52.5
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 2.6e-27 125.6 121 52.9
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 2.6e-27 125.6 118 52.5
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 4.4e-27 124.8 120 52.5
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 4.4e-27 124.8 110 50.0
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 5.8e-27 124.4 120 49.2
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 5.8e-27 124.4 124 49.2
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 7.6e-27 124.0 110 50.9
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 9.9e-27 123.6 116 49.1
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 9.9e-27 123.6 124 47.6
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 9.9e-27 123.6 124 47.6
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 9.9e-27 123.6 116 51.7
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 1.7e-26 122.9 121 50.4
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 2.2e-26 122.5 123 47.2
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 2.9e-26 122.1 120 49.2
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 2.9e-26 122.1 120 49.2
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 4.9e-26 121.3 120 49.2
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 6.4e-26 120.9 125 46.4
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 6.4e-26 120.9 125 47.2
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 1.1e-25 120.2 110 53.6
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 3.2e-25 118.6 117 46.2
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 4.2e-25 118.2 110 50.0
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 5.4e-25 117.9 125 47.2
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 9.3e-25 117.1 110 48.2
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 1.2e-24 116.7 125 45.6
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 1.6e-24 116.3 108 51.9
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 4.6e-24 114.8 117 49.6
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 1.0e-23 113.6 114 49.1
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 1.3e-23 113.2 120 50.0
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 8.7e-23 110.5 107 49.5
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 1.5e-22 109.8 103 51.5
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 1.5e-22 109.8 120 48.3
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 4.3e-22 108.2 124 47.6
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 1.8e-20 102.8 123 44.7
Mapoly0043s0107 Marchantia polymorpha HOM05D005168 ORTHO05D006358 4.0e-20 101.7 119 45.4
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 6.9e-20 100.9 121 41.3
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 1.2e-19 100.1 117 41.0
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 1.3e-18 96.7 124 40.3
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 2.2e-18 95.9 120 43.3
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.8e-15 86.3 64 56.2
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 1.8e-15 86.3 107 39.3
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 1.1e-14 83.6 67 56.7
Pp3c24_7070 Physcomitrium patens HOM05D005168 ORTHO05D006358 1.1e-14 83.6 151 33.1
ATR0057G015 Amborella trichopoda HOM05D005168 ORTHO05D006358 1.5e-14 83.2 86 47.7
Eucgr.F02832 Eucalyptus grandis HOM05D005168 ORTHO05D006358 7.4e-14 80.9 76 51.3
TPR.G9182 Trifolium pratense HOM05D005168 ORTHO05D006358 7.4e-14 80.9 75 54.7
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 1.6e-13 79.7 110 39.1
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 4.8e-13 78.2 89 43.8
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 1.8e-12 76.3 62 54.8
BcaC05g25904 Brassica carinata HOM05D005168 ORTHO05D006358 2.6e-11 72.4 89 47.2
Cre01.g018000 Chlamydomonas reinhardtii HOM05D005168 ORTHO05D006358 3.4e-11 72.0 117 31.6
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 5.8e-11 71.2 54 53.7
SHI17132 Sapria himalayana HOM05D005168 ORTHO05D006358 2.2e-10 69.3 105 40.0
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 3.8e-10 68.6 53 50.9
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 4.9e-10 68.2 53 54.7
MCO15G369 Micromonas commoda HOM05D005168 ORTHO05D006358 4.9e-10 68.2 130 34.6
CDE09G0329 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 6.4e-10 67.8 73 45.2
Lj4A21T59 Lonicera japonica HOM05D005168 ORTHO05D006358 6.4e-10 67.8 77 40.3
FAN26G0870 Fragaria x ananassa HOM05D005168 ORTHO05D006358 1.4e-09 66.6 69 47.8
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.4e-09 66.6 47 61.7
AUR62041475 Chenopodium quinoa HOM05D005168 ORTHO05D006358 9.3e-09 63.9 72 45.8
Glyma.08G301902 Glycine max HOM05D005168 ORTHO05D006358 1.6e-08 63.2 81 40.7
AUR62040557 Chenopodium quinoa HOM05D005168 ORTHO05D006358 2.7e-08 62.4 53 52.8
Ah.01g021000 Amaranthus hybridus HOM05D005168 ORTHO05D006358 3.5e-08 62.0 53 50.9
Glyma.06G213500 Glycine max HOM05D005168 ORTHO05D006358 6.0e-08 61.2 65 46.2
Glyma.17G201200 Glycine max HOM05D005168 ORTHO05D006358 1.3e-07 60.1 65 46.2
Glyma.08G246200 Glycine max HOM05D005168 ORTHO05D006358 2.3e-07 59.3 45 57.8
CBR_g23850 Chara braunii HOM05D005168 ORTHO05D006358 5.1e-07 58.2 85 36.5
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 1.9e-06 56.2 40 60.0
Glyma.11G172400 Glycine max HOM05D005168 ORTHO05D006358 1.9e-06 56.2 67 41.8


User provided reference genes

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