Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 5.1e-67 257.7 137 100.0
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 3.5e-52 208.4 134 82.1
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 6.7e-51 204.1 138 78.3
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 1.6e-49 199.5 140 75.7
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 4.8e-49 198.0 135 74.1
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 8.2e-49 197.2 121 83.5
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 8.2e-49 197.2 126 80.2
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.1e-48 196.8 126 81.0
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 2.4e-48 195.7 132 78.0
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 2.0e-47 192.6 132 76.5
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 2.6e-47 192.2 138 72.5
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 2.6e-47 192.2 131 76.3
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 5.9e-47 191.0 126 78.6
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 1.3e-46 189.9 139 74.1
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.7e-46 189.5 132 75.0
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.7e-46 189.5 132 75.0
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 2.9e-46 188.7 128 74.2
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 5.0e-46 188.0 132 77.3
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 6.5e-46 187.6 135 72.6
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 1.4e-45 186.4 128 76.6
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 5.5e-45 184.5 135 70.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.6e-44 183.0 131 74.8
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 4.6e-44 181.4 136 72.8
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 4.6e-44 181.4 128 75.8
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 4.6e-44 181.4 124 75.0
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 4.6e-44 181.4 120 79.2
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 6.1e-44 181.0 135 69.6
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 6.1e-44 181.0 132 72.0
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 7.9e-44 180.6 128 74.2
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 7.9e-44 180.6 128 74.2
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 7.9e-44 180.6 118 78.8
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.8e-43 179.5 128 73.4
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 2.3e-43 179.1 127 75.6
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 3.0e-43 178.7 135 68.1
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 3.9e-43 178.3 135 68.1
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 5.1e-43 177.9 128 74.2
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 6.7e-43 177.6 128 74.2
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 8.8e-43 177.2 130 70.8
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.1e-42 176.8 143 67.1
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.1e-42 176.8 143 66.4
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.1e-42 176.8 135 68.1
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 1.5e-42 176.4 141 70.9
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 3.3e-42 175.3 121 73.6
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 5.7e-42 174.5 119 76.5
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 1.7e-41 172.9 134 68.7
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 1.7e-41 172.9 128 71.1
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 2.2e-41 172.6 128 71.1
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 2.2e-41 172.6 124 73.4
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.2e-41 172.6 126 71.4
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 6.3e-41 171.0 132 68.9
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 6.3e-41 171.0 133 71.4
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.4e-40 169.1 120 71.7
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 3.1e-40 168.7 127 72.4
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 6.9e-40 167.5 124 68.5
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 9.1e-40 167.2 118 73.7
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 9.1e-40 167.2 118 73.7
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 9.1e-40 167.2 164 59.1
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 1.2e-39 166.8 118 73.7
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 1.2e-39 166.8 118 73.7
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 1.2e-39 166.8 118 73.7
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 1.2e-39 166.8 127 73.2
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 1.2e-39 166.8 127 69.3
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 1.5e-39 166.4 118 74.6
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 1.5e-39 166.4 128 69.5
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.5e-39 166.4 133 66.9
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.4e-39 165.2 121 71.9
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 3.4e-39 165.2 141 66.0
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 4.5e-39 164.9 127 66.1
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 5.9e-39 164.5 137 66.4
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 7.7e-39 164.1 118 74.6
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 1.3e-38 163.3 133 65.4
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 1.7e-38 162.9 142 64.8
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 2.2e-38 162.5 136 66.2
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 2.9e-38 162.2 128 69.5
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 1.9e-37 159.5 132 65.2
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 5.5e-37 157.9 133 63.9
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 7.2e-37 157.5 127 65.4
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 1.6e-36 156.4 113 69.0
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 2.7e-36 155.6 133 63.2
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 4.7e-36 154.8 121 66.1
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 4.7e-36 154.8 125 67.2
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 6.1e-36 154.5 136 65.4
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 7.9e-36 154.1 119 68.1
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 2.3e-35 152.5 155 57.4
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 3.0e-35 152.1 157 56.1
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 6.7e-35 151.0 116 68.1
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 6.7e-35 151.0 119 65.5
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 1.5e-34 149.8 127 62.2
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 2.0e-34 149.4 119 66.4
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 9.7e-34 147.1 94 78.7
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 1.3e-33 146.7 116 65.5
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 1.7e-33 146.4 121 63.6
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 7.7e-31 137.5 92 77.2
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 5.0e-30 134.8 84 79.8
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.1e-29 133.7 96 74.0
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 2.5e-29 132.5 120 63.3
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 7.2e-29 131.0 95 72.6
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 1.2e-28 130.2 94 70.2
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.1e-28 129.4 95 71.6
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 5.2e-27 124.8 142 54.2
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 1.5e-26 123.2 127 52.8
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 6.3e-25 117.9 77 74.0
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 1.8e-24 116.3 109 55.0
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 7.0e-24 114.4 100 65.0
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 3.8e-22 108.6 82 68.3
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 5.0e-22 108.2 81 70.4
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 6.5e-22 107.8 75 73.3
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 4.7e-20 101.7 118 45.8
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.8e-19 99.8 101 56.4
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 8.8e-19 97.4 79 68.4
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 1.1e-16 90.5 134 44.8
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 1.2e-12 77.0 113 40.7
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 1.7e-09 66.6 92 42.4
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 2.2e-09 66.2 39 82.1
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 2.2e-09 66.2 54 61.1
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 6.3e-09 64.7 89 49.4


User provided reference genes

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