Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 2.7e-186 655.2 339 100.0
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 2.7e-146 522.3 334 80.8
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 4.1e-142 508.4 338 77.8
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 5.4e-134 481.5 334 76.3
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 2.3e-132 476.1 333 75.1
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 3.8e-132 475.3 346 74.9
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.2e-130 470.3 326 75.5
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.6e-130 469.9 327 75.5
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 3.6e-130 468.8 328 75.3
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 4.7e-130 468.4 318 77.4
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 1.8e-129 466.5 323 77.7
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 3.0e-129 465.7 324 75.6
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 3.4e-128 462.2 323 73.1
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.4e-128 462.2 332 74.4
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.2e-127 459.5 322 73.9
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.1e-126 457.2 317 75.1
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 5.4e-126 454.9 317 75.1
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 5.4e-126 454.9 317 74.4
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 2.7e-125 452.6 323 75.2
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 2.1e-122 443.0 325 72.0
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.1e-121 440.7 320 73.1
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 8.9e-121 437.6 331 70.7
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.9e-121 437.6 331 70.7
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.2e-120 437.2 331 70.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.2e-120 437.2 331 70.7
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.2e-120 437.2 331 70.7
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.5e-120 434.5 331 70.4
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.3e-119 433.7 322 71.7
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 1.3e-119 433.7 326 71.2
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.3e-119 433.7 339 69.0
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 2.9e-119 432.6 330 68.8
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 6.4e-119 431.4 339 67.8
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 6.4e-119 431.4 326 69.0
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 8.3e-119 431.0 328 69.5
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.4e-118 430.3 324 70.7
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 2.4e-118 429.5 325 69.2
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 7.8e-117 424.5 339 67.0
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 2.3e-116 422.9 321 69.8
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 2.3e-116 422.9 331 68.3
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 5.0e-116 421.8 321 67.0
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 8.6e-116 421.0 321 69.5
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 2.5e-115 419.5 318 69.8
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 2.5e-115 419.5 321 68.8
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 7.3e-115 417.9 318 68.6
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 7.3e-115 417.9 331 65.9
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 9.5e-115 417.5 318 69.5
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.6e-114 416.8 327 66.4
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 4.7e-114 415.2 321 68.2
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 6.2e-114 414.8 318 69.5
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 6.2e-114 414.8 317 70.3
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 8.1e-114 414.5 320 68.1
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 1.1e-113 414.1 327 66.7
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.1e-113 414.1 319 68.3
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.6e-112 409.5 326 66.0
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.6e-112 409.5 320 65.6
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.6e-112 409.5 320 65.6
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 3.4e-112 409.1 338 64.8
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 3.4e-112 409.1 320 65.6
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 3.4e-112 409.1 320 65.6
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 5.8e-112 408.3 316 68.0
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 7.5e-112 407.9 320 65.0
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.2e-111 406.4 320 64.7
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 2.9e-111 406.0 323 66.6
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 7.1e-110 401.4 303 70.0
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 9.2e-110 401.0 317 67.8
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 9.2e-110 401.0 303 69.3
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 6.0e-109 398.3 327 64.8
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.1e-106 389.8 317 65.6
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.8e-105 386.7 335 60.0
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 2.4e-105 386.3 325 64.6
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 8.9e-105 384.4 325 65.8
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 2.0e-104 383.3 322 64.3
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 2.0e-104 383.3 323 61.9
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 7.6e-104 381.3 331 62.8
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.2e-101 374.0 318 60.7
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 2.3e-100 369.8 269 70.6
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 5.1e-100 368.6 328 60.4
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.5e-99 367.1 290 65.9
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 2.8e-98 362.8 321 59.5
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 2.0e-96 356.7 316 59.8
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 4.4e-96 355.5 334 59.3
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 5.8e-96 355.1 329 58.1
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 7.6e-96 354.8 323 58.8
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 1.9e-94 350.1 328 56.7
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 7.1e-94 348.2 325 58.5
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.5e-91 339.7 265 67.9
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.0e-88 330.1 322 57.5
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.8e-84 317.0 239 69.5
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 8.7e-84 314.7 321 54.2
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 6.2e-82 308.5 269 57.2
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 5.3e-81 305.4 339 52.8
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.5e-80 303.9 328 50.6
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 2.1e-77 293.5 321 52.0
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 2.5e-75 286.6 326 52.8
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 2.5e-70 270.0 329 46.8
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 5.5e-70 268.9 174 79.3
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.1e-65 254.6 317 46.1
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.1e-65 253.1 322 48.1
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.2e-64 251.1 224 60.7
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 5.0e-63 245.7 187 69.0
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.8e-58 229.9 203 59.6
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 2.6e-56 223.4 162 70.4
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 6.1e-53 212.2 203 57.1
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 5.7e-43 179.1 253 43.5
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.8e-33 147.5 108 68.5
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.5e-32 142.9 108 66.7
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 2.0e-27 127.5 269 29.7
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 4.4e-27 126.3 90 72.2
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 5.5e-22 109.4 110 56.4
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 8.9e-20 102.1 122 45.9
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.1e-14 85.1 82 58.5
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.2e-09 67.0 79 51.9
MCO05G070 Micromonas commoda HOM05D002465 ORTHO05D008860 4.1e-09 66.6 236 27.1


User provided reference genes

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