Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 3.0e-86 323.6 536 100.0
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 6.4e-49 199.5 120 76.7
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 1.1e-48 198.7 120 76.7
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.9e-48 198.0 120 77.5
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 6.0e-47 193.0 121 77.7
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 6.0e-47 193.0 120 73.3
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 1.0e-46 192.2 120 76.7
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 2.3e-46 191.0 120 75.8
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 3.0e-46 190.7 120 75.8
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 1.5e-45 188.3 120 72.5
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.3e-45 187.2 570 77.4
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 4.3e-45 186.8 119 72.3
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 4.3e-45 186.8 120 73.3
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 1.6e-44 184.9 120 73.3
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 1.6e-44 184.9 120 73.3
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 4.8e-44 183.3 119 71.4
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 5.3e-43 179.9 119 70.6
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 1.5e-42 178.3 120 70.8
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 2.0e-42 177.9 121 71.9
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 2.9e-41 174.1 122 73.8
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.1e-40 172.2 119 64.7
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 1.9e-40 171.4 119 70.6
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 1.9e-40 171.4 120 67.5
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 5.5e-40 169.9 120 68.3
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 7.1e-40 169.5 119 67.2
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 7.1e-40 169.5 119 67.2
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 7.1e-40 169.5 120 66.7
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 9.3e-40 169.1 120 66.7
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 9.3e-40 169.1 113 70.8
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.7e-39 167.5 119 68.9
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.7e-39 167.5 119 68.9
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.6e-39 166.8 120 65.8
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 4.6e-39 166.8 120 68.3
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 6.0e-39 166.4 119 68.9
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 6.0e-39 166.4 119 68.9
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 5.1e-38 163.3 122 63.9
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 8.7e-38 162.5 120 65.0
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 1.5e-37 161.8 122 63.1
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 7.4e-37 159.5 119 64.7
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 2.2e-36 157.9 122 61.5
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.8e-36 157.5 115 65.2
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 4.8e-36 156.8 122 61.5
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 1.1e-35 155.6 116 69.0
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 1.1e-35 155.6 122 59.8
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 1.8e-35 154.8 120 57.5
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 2.4e-35 154.5 112 61.6
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 1.2e-34 152.1 120 60.0
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.0e-33 149.1 113 64.6
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 3.8e-33 147.1 113 63.7
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 3.8e-33 147.1 119 59.7
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 2.5e-32 144.4 117 58.1
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 2.5e-32 144.4 117 58.1
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 5.5e-32 143.3 125 57.6
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 2.7e-31 141.0 113 59.3
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 3.6e-31 140.6 113 59.3
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 3.6e-31 140.6 121 55.4
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 1.0e-30 139.0 119 54.6
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.0e-30 139.0 128 53.9
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 1.8e-30 138.3 116 58.6
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 2.3e-30 137.9 113 57.5
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.3e-30 137.9 121 57.9
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 3.3e-29 134.0 122 54.9
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 3.3e-29 134.0 123 54.5
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 7.4e-29 132.9 119 61.3
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 7.4e-29 132.9 123 56.1
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 9.7e-29 132.5 126 54.0
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 1.3e-28 132.1 117 50.4
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 2.8e-28 131.0 115 54.8
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 3.7e-28 130.6 128 52.3
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 3.7e-28 130.6 128 52.3
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 4.8e-28 130.2 127 52.0
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 4.8e-28 130.2 122 55.7
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 6.3e-28 129.8 128 52.3
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 2.4e-27 127.9 132 53.8
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 6.9e-27 126.3 121 53.7
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.2e-26 125.6 119 51.3
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 2.6e-26 124.4 133 54.9
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.0e-25 122.5 133 54.9
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 8.5e-25 119.4 124 51.6
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 4.2e-24 117.1 132 53.0
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 4.2e-24 117.1 135 51.1
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 4.2e-24 117.1 117 51.3
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 4.2e-24 117.1 124 47.6
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 5.5e-24 116.7 128 54.7
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 7.2e-24 116.3 124 50.0
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 9.4e-24 115.9 134 48.5
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 3.6e-23 114.0 130 50.8
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 4.7e-23 113.6 123 52.8
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 4.7e-23 113.6 123 52.8
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 7.9e-23 112.8 130 52.3
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 1.8e-22 111.7 126 51.6
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 1.8e-22 111.7 126 48.4
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.6e-21 107.8 122 50.0
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 3.3e-21 107.5 122 50.0
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 7.4e-21 106.3 70 67.1
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 7.4e-21 106.3 125 46.4
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 2.2e-20 104.8 71 63.4
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 4.8e-20 103.6 65 70.8
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 4.2e-16 90.5 121 44.6
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 1.2e-15 89.0 70 60.0
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 2.7e-15 87.8 71 60.6
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 6.1e-15 86.7 96 45.8
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.3e-12 79.0 120 33.3
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.2e-12 78.2 120 33.3
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.4e-11 75.5 50 72.0
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 1.5e-08 65.5 43 60.5
Lj5C202T3 Lonicera japonica HOM05D006918 ORTHO05D008525 1.6e-07 62.0 71 50.7


User provided reference genes

Program Settings