Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 3.6e-252 874.4 426 100.0
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.7e-201 706.1 435 78.4
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 8.1e-196 687.2 427 77.5
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.8e-187 659.4 435 74.0
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 3.2e-184 648.7 426 72.5
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 7.9e-183 644.0 426 72.5
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 5.1e-182 641.3 431 70.1
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 3.7e-180 635.2 426 71.4
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 3.7e-180 635.2 426 71.4
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.5e-178 629.8 427 71.2
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 2.6e-178 629.0 427 71.0
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 5.8e-178 627.9 426 69.7
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 3.8e-177 625.2 417 71.5
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 2.1e-175 619.4 426 68.5
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 2.7e-175 619.0 426 70.2
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 1.0e-174 617.1 427 69.1
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 1.0e-174 617.1 440 66.8
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 3.9e-174 615.1 440 66.6
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 2.5e-173 612.5 452 66.4
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 6.2e-172 607.8 441 66.2
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 6.2e-172 607.8 431 68.2
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 8.2e-172 607.4 425 69.2
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 1.8e-171 606.3 425 69.2
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 1.2e-170 603.6 431 67.5
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 2.0e-170 602.8 426 69.2
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 2.6e-170 602.4 490 62.0
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 4.5e-170 601.7 424 67.9
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 7.6e-170 600.9 424 68.6
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 1.7e-169 599.7 484 62.0
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 1.4e-168 596.7 425 66.8
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 2.5e-168 595.9 431 66.4
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 7.1e-168 594.3 415 68.4
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 1.3e-164 583.6 431 65.0
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 8.2e-164 580.9 434 65.2
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 5.3e-163 578.2 430 65.8
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 9.0e-163 577.4 424 64.4
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 3.4e-162 575.5 426 65.0
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 1.7e-161 573.2 426 64.6
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 3.8e-161 572.0 430 64.9
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.9e-160 569.7 426 63.1
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 2.5e-160 569.3 432 61.8
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 5.5e-160 568.2 424 65.8
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 3.6e-159 565.5 426 62.2
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.1e-159 564.7 453 62.5
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 6.1e-159 564.7 464 60.6
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.0e-158 563.9 426 62.9
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.0e-158 563.9 426 64.6
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 2.3e-158 562.8 427 62.3
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 1.1e-157 560.5 427 62.1
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 1.1e-157 560.5 427 62.1
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 2.5e-157 559.3 427 62.1
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 3.3e-157 558.9 426 62.7
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 9.7e-157 557.4 426 61.0
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 3.7e-156 555.4 432 61.1
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 4.8e-156 555.1 427 61.6
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 4.8e-156 555.1 427 61.6
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 4.8e-156 555.1 375 72.3
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 2.4e-155 552.7 426 62.7
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.1e-155 552.0 428 61.4
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 3.4e-154 548.9 421 61.8
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.3e-153 547.0 457 57.8
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 3.8e-153 545.4 433 61.2
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 8.5e-153 544.3 432 61.8
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 1.4e-152 543.5 427 60.9
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 5.5e-152 541.6 428 59.8
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 2.7e-151 539.3 416 62.5
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 3.4e-146 522.3 440 58.2
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.4e-144 516.9 428 58.4
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.9e-144 516.5 425 59.3
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.6e-143 513.5 425 59.1
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 2.3e-142 509.6 465 60.2
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 5.2e-142 508.4 428 59.3
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.8e-142 507.7 425 58.4
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 2.6e-141 506.1 427 59.3
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.4e-141 505.4 432 58.1
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 7.4e-141 504.6 350 70.0
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 1.2e-135 487.3 429 56.6
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.8e-134 483.4 432 56.2
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.6e-130 470.3 428 54.9
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.6e-130 470.3 428 54.9
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 2.5e-128 463.0 432 54.6
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 3.2e-128 462.6 349 63.9
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 4.0e-126 455.7 386 57.3
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 3.5e-122 442.6 349 63.6
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.2e-119 434.1 336 63.1
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.4e-117 426.0 407 50.9
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.7e-113 413.7 416 48.1
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 5.8e-101 372.1 446 41.7
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 7.5e-101 371.7 427 42.2
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 1.2e-95 354.4 422 43.1
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 2.2e-92 343.6 496 39.7
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 4.0e-86 322.8 252 61.9
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 3.5e-82 309.7 209 68.9
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 1.2e-79 301.2 215 67.4
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 2.8e-79 300.1 181 77.9
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 6.9e-78 295.4 391 40.2
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 4.9e-76 289.3 186 72.0
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 2.8e-63 246.9 185 63.2
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 4.5e-61 239.6 186 60.2
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 4.3e-56 223.0 159 64.2
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 6.7e-49 199.1 161 64.6
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 2.5e-48 197.2 161 64.0
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 2.5e-48 197.2 161 64.6
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 4.3e-48 196.4 153 65.4
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.6e-47 194.5 147 57.8
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.1e-42 176.0 106 76.4
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 1.8e-41 174.5 135 66.7
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.3e-39 168.3 128 59.4
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 8.2e-39 165.6 125 61.6
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 1.5e-37 161.4 152 52.0
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.6e-37 160.6 117 65.0
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.0e-36 158.7 117 65.0
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 1.8e-33 147.9 100 69.0
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 2.2e-31 141.0 92 71.7
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 2.2e-28 131.0 76 76.3
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 1.5e-27 128.3 83 67.5
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 1.9e-27 127.9 88 68.2
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.1e-26 124.4 135 46.7
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 8.0e-26 122.5 101 54.5
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 8.8e-25 119.0 74 70.3
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.0e-21 107.8 93 50.5
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 3.8e-20 103.6 61 72.1
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 5.0e-20 103.2 119 50.4
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 3.2e-19 100.5 59 69.5
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 2.1e-18 97.8 97 51.5
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 3.1e-14 84.0 168 29.2
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.7e-13 80.9 64 56.2
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.7e-12 78.2 82 47.6
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 2.5e-11 74.3 52 63.5
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 7.5e-08 62.8 42 66.7
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.7e-07 61.6 37 67.6
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 3.7e-07 60.5 42 64.3
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 4.1e-06 57.0 102 35.3
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 4.1e-06 57.0 42 59.5


User provided reference genes

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