Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 3.0e-173 611.7 293 100.0
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 3.9e-133 478.4 291 73.9
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 3.4e-129 465.3 294 72.1
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 3.2e-127 458.8 293 71.0
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 4.2e-127 458.4 300 71.7
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 1.2e-126 456.8 293 71.3
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 3.0e-125 452.2 288 70.8
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 9.7e-124 447.2 289 70.6
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 8.2e-123 444.1 289 69.2
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.4e-122 443.4 293 70.0
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 1.4e-122 443.4 268 73.5
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.8e-122 443.0 301 68.8
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 9.1e-122 440.7 288 69.8
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.5e-121 438.3 295 69.2
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 5.9e-121 438.0 293 67.9
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.3e-120 436.8 285 68.8
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 2.9e-120 435.6 293 69.6
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 8.5e-120 434.1 293 68.9
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.4e-119 433.3 291 65.3
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.9e-119 433.0 285 68.4
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.7e-118 428.3 301 66.8
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 2.0e-116 422.9 293 65.9
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 7.4e-116 421.0 291 67.7
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 8.2e-115 417.5 298 64.4
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 4.1e-114 415.2 280 67.1
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 4.1e-114 415.2 291 64.6
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 4.5e-113 411.8 293 63.8
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 2.2e-112 409.5 295 66.1
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 3.8e-112 408.7 294 65.3
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 3.8e-112 408.7 294 65.3
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 6.5e-112 407.9 289 64.7
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 8.5e-112 407.5 280 65.0
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 1.9e-111 406.4 290 66.2
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.5e-111 406.0 286 64.3
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 4.2e-111 405.2 290 64.8
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 2.1e-110 402.9 290 62.1
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 3.6e-110 402.1 292 64.4
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 6.1e-110 401.4 292 64.7
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 6.1e-110 401.4 288 62.8
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 8.0e-110 401.0 272 65.1
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.5e-108 396.7 285 62.1
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 5.7e-108 394.8 287 64.5
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 5.7e-108 394.8 237 74.7
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 2.8e-107 392.5 282 66.0
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 3.7e-107 392.1 235 74.5
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 3.7e-107 392.1 281 62.6
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 2.4e-106 389.4 278 62.9
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.2e-105 387.1 293 61.8
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 1.3e-104 383.6 266 65.0
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 2.9e-104 382.5 245 70.2
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.6e-102 376.7 270 66.7
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 8.0e-102 374.4 274 60.9
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 1.2e-100 370.5 293 56.3
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 9.8e-100 367.5 292 61.0
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 7.0e-98 361.3 281 61.9
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.0e-93 345.5 321 54.8
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 2.8e-91 339.3 277 54.9
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 3.3e-87 325.9 288 50.3
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 4.3e-87 325.5 277 53.1
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 9.8e-84 314.3 244 59.8
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 4.6e-81 305.4 223 62.3
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 1.8e-77 293.5 215 62.3
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 6.8e-77 291.6 283 46.6
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 8.9e-77 291.2 223 60.5
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.9e-74 283.5 292 50.0
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.1e-71 274.2 289 50.9
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 8.1e-70 268.1 226 57.1
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 1.4e-66 257.3 225 54.2
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 6.6e-64 248.4 277 40.4
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 8.6e-64 248.1 273 40.7
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 1.1e-63 247.7 371 38.5
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 5.6e-63 245.4 210 52.9
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 5.8e-60 235.3 274 37.6
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 1.1e-55 221.1 228 49.1
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 9.3e-42 174.9 138 60.9
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 7.4e-39 165.2 109 70.6
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 2.2e-35 153.7 108 62.0
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 1.1e-26 124.8 366 26.0
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.8e-24 117.5 67 76.1
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 6.7e-24 115.5 180 39.4
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 4.6e-17 92.8 70 61.4
Zm00001eb340470 Zea mays HOM05D007847 ORTHO05D009946 3.9e-08 63.2 58 48.3
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 5.7e-07 59.3 42 57.1
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 9.7e-07 58.5 42 64.3


User provided reference genes

Program Settings