Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 9.7e-203 709.9 354 100.0
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 1.4e-198 696.0 354 98.0
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 2.4e-129 466.1 349 67.0
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 9.3e-129 464.2 324 71.0
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 3.5e-128 462.2 351 65.2
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 1.3e-127 460.3 353 65.4
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 5.3e-124 448.4 347 64.0
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 9.0e-124 447.6 334 66.2
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 6.4e-122 441.4 352 63.1
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 1.9e-121 439.9 290 72.4
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 7.1e-121 438.0 368 62.8
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 9.3e-121 437.6 370 60.5
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 2.1e-120 436.4 356 62.1
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 2.3e-119 433.0 362 61.0
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 1.5e-118 430.3 351 61.3
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 3.3e-118 429.1 359 59.1
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 2.8e-117 426.0 361 62.0
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 6.2e-117 424.9 311 67.2
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 1.2e-115 420.6 353 60.6
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.5e-115 420.2 349 60.2
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 7.6e-115 417.9 349 60.2
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.7e-114 416.8 357 60.8
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.7e-114 416.8 349 60.2
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 1.7e-114 416.8 349 60.2
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 4.9e-114 415.2 419 54.2
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 6.4e-114 414.8 350 61.1
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.4e-113 413.7 351 60.1
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 4.2e-113 412.1 339 63.7
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 2.7e-112 409.5 291 68.0
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 1.8e-111 406.8 379 58.8
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 1.9e-110 403.3 284 69.0
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 2.5e-110 402.9 284 69.0
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 4.3e-110 402.1 347 60.5
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 4.3e-110 402.1 350 58.9
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 5.6e-110 401.7 285 68.1
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 3.7e-109 399.1 285 67.4
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 3.7e-109 399.1 335 60.3
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 3.7e-109 399.1 350 58.6
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 3.7e-109 399.1 285 68.1
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 8.2e-109 397.9 340 59.7
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 8.2e-109 397.9 348 60.1
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 8.2e-109 397.9 303 63.7
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 1.1e-108 397.5 335 61.5
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 1.4e-108 397.1 284 68.3
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 3.1e-108 396.0 351 57.3
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 3.1e-108 396.0 343 60.9
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 9.0e-108 394.4 343 59.8
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 1.2e-107 394.0 339 59.0
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.2e-107 394.0 320 62.8
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 2.0e-107 393.3 339 59.0
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 2.6e-107 392.9 317 59.6
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 3.4e-107 392.5 340 59.4
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 4.5e-107 392.1 291 64.3
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 7.6e-107 391.3 297 64.6
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 3.8e-106 389.0 337 59.6
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 4.9e-106 388.7 285 63.9
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 3.2e-105 386.0 341 58.4
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 3.2e-105 386.0 341 58.4
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 7.1e-105 384.8 289 64.4
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 1.6e-104 383.6 344 59.9
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 6.0e-104 381.7 301 59.5
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.0e-103 380.9 289 62.3
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 1.0e-103 380.9 307 58.6
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 3.0e-103 379.4 324 59.3
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 5.1e-103 378.6 303 61.1
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 8.7e-103 377.9 289 62.6
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 8.7e-103 377.9 348 55.2
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 3.3e-102 375.9 388 50.8
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 4.8e-101 372.1 343 54.2
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 8.2e-101 371.3 363 53.2
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 4.5e-99 365.5 333 57.4
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 5.9e-99 365.2 287 61.0
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 5.9e-99 365.2 310 58.1
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 1.7e-98 363.6 292 62.0
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 4.6e-96 355.5 360 53.9
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 1.4e-95 354.0 310 55.8
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 2.3e-95 353.2 296 59.1
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 1.5e-94 350.5 357 52.1
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 1.3e-93 347.4 337 54.3
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 3.7e-93 345.9 310 56.1
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 8.2e-93 344.7 331 56.8
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 2.9e-90 336.3 340 53.5
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 3.0e-87 326.2 258 62.0
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 3.0e-87 326.2 309 54.0
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 1.1e-86 324.3 316 52.5
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 1.1e-84 317.8 252 58.7
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 3.4e-83 312.8 341 50.7
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 7.4e-78 295.0 295 52.9
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 3.7e-77 292.7 347 47.3
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.1e-76 289.3 276 54.0
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 5.3e-76 288.9 309 50.2
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 3.0e-71 273.1 261 52.5
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 7.5e-70 268.5 202 60.9
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 3.5e-67 259.6 297 43.8
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 4.8e-61 239.2 297 41.4
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 7.7e-59 231.9 331 40.8
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 3.3e-57 226.5 305 40.3
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 8.9e-55 218.4 146 67.8
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 3.1e-52 209.9 154 61.0
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 3.1e-52 209.9 196 56.1
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 1.5e-49 201.1 136 66.9
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 5.8e-46 189.1 216 42.6
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 7.0e-44 182.2 279 39.1
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 1.8e-39 167.5 390 31.0
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 1.8e-31 141.0 299 34.1
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 9.9e-30 135.2 162 45.7
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 2.2e-29 134.0 157 42.7
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 5.8e-22 109.4 79 62.0
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 1.1e-20 105.1 99 48.5
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 9.2e-20 102.1 67 64.2
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 3.2e-12 77.0 61 59.0
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 3.2e-12 77.0 61 59.0
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 7.8e-11 72.4 150 32.0
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 1.4e-07 61.6 163 31.3
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 1.2e-06 58.5 151 30.5
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 1.2e-06 58.5 156 31.4
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 2.0e-06 57.8 178 29.8
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 2.6e-06 57.4 178 29.8
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 4.5e-06 56.6 167 29.3
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 4.5e-06 56.6 167 29.3
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 7.6e-06 55.8 151 31.1
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 7.6e-06 55.8 180 30.6
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 9.9e-06 55.5 179 30.2


User provided reference genes

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