Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 5.1e-204 714.1 354 100.0
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 5.0e-199 697.6 354 98.0
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 7.8e-128 461.1 349 66.2
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 6.6e-127 458.0 324 69.8
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 1.9e-126 456.4 353 64.6
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 2.8e-125 452.6 351 63.8
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 5.8e-123 444.9 347 63.4
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 3.8e-122 442.2 334 65.3
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 2.4e-121 439.5 352 62.2
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 4.6e-120 435.3 290 71.0
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 4.6e-120 435.3 370 59.7
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 5.1e-119 431.8 368 61.7
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 5.1e-119 431.8 356 61.2
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 3.3e-118 429.1 362 60.5
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 1.1e-116 424.1 351 60.4
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 6.9e-116 421.4 361 61.2
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 1.5e-115 420.2 311 65.9
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 2.0e-115 419.9 359 57.9
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 2.9e-114 416.0 349 59.3
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 1.1e-113 414.1 353 59.5
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 3.2e-113 412.5 349 59.3
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 3.2e-113 412.5 349 59.3
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 4.2e-113 412.1 349 59.3
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 7.1e-113 411.4 350 60.6
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 9.3e-113 411.0 419 53.5
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.2e-112 410.6 357 59.7
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.2e-112 410.6 351 59.5
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 2.1e-112 409.8 339 63.1
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 2.3e-111 406.4 291 67.4
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 5.6e-110 401.7 284 68.0
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 1.3e-109 400.6 379 57.8
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 1.6e-109 400.2 285 67.0
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 2.8e-109 399.4 347 59.9
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 2.8e-109 399.4 284 68.0
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 4.8e-109 398.7 350 58.3
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 1.1e-108 397.5 285 67.0
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 4.0e-108 395.6 285 66.7
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 4.0e-108 395.6 350 58.0
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 4.0e-108 395.6 351 56.7
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 6.9e-108 394.8 348 59.5
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 2.6e-107 392.9 335 60.6
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 3.4e-107 392.5 335 59.1
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 3.4e-107 392.5 284 66.9
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 4.5e-107 392.1 303 62.7
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 5.8e-107 391.7 340 58.5
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.0e-106 391.0 320 61.9
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 2.2e-106 389.8 317 58.7
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 2.9e-106 389.4 343 59.8
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 6.5e-106 388.3 343 58.6
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 6.5e-106 388.3 291 63.6
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 1.1e-105 387.5 339 57.8
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 1.9e-105 386.7 339 57.8
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 1.9e-105 386.7 297 63.6
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 3.2e-105 386.0 340 58.2
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 4.2e-105 385.6 285 63.2
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 6.0e-104 381.7 337 58.2
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.8e-103 380.2 289 63.3
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 2.3e-103 379.8 341 57.2
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 2.3e-103 379.8 341 57.2
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 3.9e-103 379.0 344 59.0
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 6.7e-103 378.3 301 58.5
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 1.1e-102 377.5 307 57.7
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 7.4e-102 374.8 388 50.3
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 9.7e-102 374.4 324 58.3
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.3e-101 374.0 289 60.9
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.2e-101 373.2 289 61.6
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 3.7e-101 372.5 303 60.1
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 4.8e-101 372.1 348 54.3
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 1.4e-100 370.5 343 53.6
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 5.9e-99 365.2 363 52.1
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 7.6e-99 364.8 310 57.7
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 2.2e-98 363.2 287 60.6
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 5.0e-98 362.1 333 56.8
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 1.4e-97 360.5 292 61.3
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 2.3e-95 353.2 310 55.5
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 2.3e-95 353.2 360 53.1
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 3.3e-94 349.4 357 51.5
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 1.3e-93 347.4 296 58.1
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 1.7e-93 347.1 310 55.8
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 2.4e-92 343.2 331 55.9
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 1.2e-91 340.9 337 53.1
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 1.2e-88 330.9 340 52.4
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 5.1e-87 325.5 258 61.6
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 1.5e-86 323.9 309 53.4
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 7.4e-86 321.6 316 51.6
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 9.1e-84 314.7 252 57.9
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 2.9e-82 309.7 340 49.7
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 9.7e-78 294.7 295 52.5
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 8.2e-77 291.6 347 47.3
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.2e-75 287.7 309 49.8
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-74 284.3 276 52.9
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 8.8e-71 271.6 261 52.5
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 1.2e-70 271.2 202 61.4
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 1.3e-66 257.7 297 43.4
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.1e-60 238.0 297 41.1
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 6.6e-58 228.8 331 39.9
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 1.1e-57 228.0 305 40.3
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.4e-55 221.1 146 68.5
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 2.3e-50 203.8 136 67.6
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 2.3e-50 203.8 196 54.1
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 5.0e-50 202.6 154 58.4
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 8.3e-45 185.3 216 41.7
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 1.3e-42 177.9 279 38.0
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 4.4e-38 162.9 390 30.3
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 1.2e-30 138.3 296 33.8
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 2.0e-30 137.5 162 46.3
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 3.5e-27 126.7 157 40.1
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 4.9e-21 106.3 79 59.5
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 1.4e-20 104.8 67 65.7
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 1.9e-20 104.4 99 48.5
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 4.2e-12 76.6 61 59.0
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 4.2e-12 76.6 61 59.0
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 3.5e-11 73.6 150 32.0
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 8.1e-08 62.4 163 31.3
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 6.9e-07 59.3 167 29.9
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 2.6e-06 57.4 167 29.9
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 2.6e-06 57.4 167 29.9
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 4.5e-06 56.6 177 30.5
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 5.8e-06 56.2 151 29.1
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 5.8e-06 56.2 167 29.3
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 7.6e-06 55.8 177 28.8
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 7.6e-06 55.8 180 30.6
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 9.9e-06 55.5 177 29.9


User provided reference genes

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