Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.2e-37 161.0 77 100.0
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 4.4e-30 136.7 76 82.9
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 2.2e-29 134.4 76 81.6
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 2.9e-29 134.0 76 81.6
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 3.7e-29 133.7 74 82.4
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 3.7e-29 133.7 75 81.3
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 6.4e-29 132.9 76 80.3
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 6.4e-29 132.9 74 83.8
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.1e-28 132.1 76 81.6
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 1.1e-28 132.1 76 80.3
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 2.4e-28 131.0 76 81.6
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 2.4e-28 131.0 76 80.3
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 2.4e-28 131.0 76 80.3
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 2.4e-28 131.0 75 80.0
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 3.2e-28 130.6 76 76.3
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 3.2e-28 130.6 76 76.3
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 5.4e-28 129.8 76 80.3
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 5.4e-28 129.8 76 80.3
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 7.0e-28 129.4 74 79.7
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 7.0e-28 129.4 76 77.6
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 9.2e-28 129.0 76 77.6
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 9.2e-28 129.0 76 75.0
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 9.2e-28 129.0 76 77.6
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 9.2e-28 129.0 75 78.7
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 1.2e-27 128.6 75 76.0
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 1.6e-27 128.3 76 80.3
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.0e-27 127.9 76 71.1
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 2.0e-27 127.9 75 76.0
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 3.5e-27 127.1 76 76.3
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 3.5e-27 127.1 76 78.9
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 4.6e-27 126.7 75 76.0
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 6.0e-27 126.3 74 75.7
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 6.0e-27 126.3 74 75.7
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 6.0e-27 126.3 74 74.3
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 6.0e-27 126.3 76 69.7
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 6.0e-27 126.3 76 75.0
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 7.8e-27 125.9 75 78.7
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.0e-26 125.6 75 74.7
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 1.0e-26 125.6 76 76.3
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 2.3e-26 124.4 76 76.3
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 2.3e-26 124.4 76 75.0
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 2.3e-26 124.4 76 75.0
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 2.3e-26 124.4 76 73.7
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 3.0e-26 124.0 76 75.0
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 3.0e-26 124.0 75 76.0
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 3.0e-26 124.0 74 74.3
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 3.9e-26 123.6 75 73.3
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 5.0e-26 123.2 76 75.0
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 6.6e-26 122.9 76 75.0
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 6.6e-26 122.9 76 72.4
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 8.6e-26 122.5 76 68.4
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 8.6e-26 122.5 76 73.7
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 1.1e-25 122.1 76 68.4
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.5e-25 121.7 76 73.7
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.5e-25 121.7 76 73.7
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 1.9e-25 121.3 75 72.0
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 3.3e-25 120.6 75 74.7
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 5.6e-25 119.8 76 69.7
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 5.6e-25 119.8 77 70.1
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 5.6e-25 119.8 74 70.3
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 9.5e-25 119.0 74 73.0
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 9.5e-25 119.0 76 68.4
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 1.2e-24 118.6 74 73.0
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 1.2e-24 118.6 74 73.0
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.2e-24 118.6 74 71.6
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 1.6e-24 118.2 76 72.4
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 2.1e-24 117.9 74 74.3
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 2.8e-24 117.5 76 68.4
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 2.8e-24 117.5 74 70.3
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 3.6e-24 117.1 74 68.9
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 3.6e-24 117.1 75 70.7
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 4.7e-24 116.7 77 68.8
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 6.2e-24 116.3 74 67.6
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 8.0e-24 115.9 74 71.6
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 1.1e-23 115.5 77 67.5
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 2.3e-23 114.4 74 70.3
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 2.3e-23 114.4 76 65.8
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 4.0e-23 113.6 76 67.1
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 4.0e-23 113.6 75 68.0
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 3.4e-22 110.5 74 67.6
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 3.4e-22 110.5 75 65.3
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 5.8e-22 109.8 75 64.0
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 7.5e-22 109.4 74 66.2
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.3e-21 108.6 75 66.7
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 2.2e-21 107.8 75 65.3
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 7.0e-20 102.8 76 69.7
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 9.2e-20 102.4 103 51.5
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 9.5e-17 92.4 55 72.7
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 3.4e-14 84.0 76 56.6
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 9.9e-14 82.4 72 56.9
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 1.7e-13 81.6 54 64.8
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 1.6e-11 75.1 43 76.7
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 2.1e-11 74.7 42 83.3
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 2.7e-11 74.3 43 81.4
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.0e-10 72.4 41 80.5
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.0e-10 72.4 41 80.5
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 6.6e-10 69.7 74 41.9
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 1.1e-09 68.9 75 40.0
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.5e-09 67.8 76 46.1
MD05G1251100 Malus domestica HOM05D006866 ORTHO05D008689 2.5e-09 67.8 44 72.7
EL10Ac8g19311 Beta vulgaris HOM05D006866 ORTHO05D008689 9.5e-09 65.9 40 67.5
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 2.1e-08 64.7 72 40.3
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 2.1e-08 64.7 40 75.0
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 6.2e-08 63.2 43 67.4
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 8.1e-08 62.8 42 66.7
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.4e-07 62.0 72 37.5
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.8e-07 61.6 72 37.5
Lj5g0020884 Lotus japonicus HOM05D000132 ORTHO05D000058 1.5e-06 58.5 38 73.7


User provided reference genes

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