Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G033700 Manihot esculenta HOM05D004104 ORTHO05D004755 7.1e-63 243.8 128 100.0
Manes.12G032000 Manihot esculenta HOM05D004104 ORTHO05D004755 5.9e-41 171.0 97 89.7
SalBow4G1878 Salvia bowleyana HOM05D004104 ORTHO05D004755 1.0e-40 170.2 93 92.5
CiPaw.03G263800 Carya illinoinensis HOM05D004104 ORTHO05D004755 3.8e-40 168.3 97 86.6
SGA_v2.0_scaffold138G35232 Striga asiatica HOM05D000374 ORTHO05D000238 3.8e-40 168.3 93 91.4
SGA_v2.0_scaffold1G00613 Striga asiatica HOM05D004104 ORTHO05D004755 5.0e-40 167.9 93 90.3
Ca_09682_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 1.1e-39 166.8 97 86.6
Phvul.007G193100 Phaseolus vulgaris HOM05D004104 ORTHO05D004755 1.1e-39 166.8 97 86.6
VMungo0720G2373 Vigna mungo HOM05D004104 ORTHO05D004755 1.1e-39 166.8 97 86.6
COL.COLO4_05896 Corchorus olitorius HOM05D005758 ORTHO05D007218 1.4e-39 166.4 93 91.4
Rhsim01G0264300 Rhododendron simsii HOM05D004104 ORTHO05D004755 1.4e-39 166.4 93 90.3
Eucgr.K03263 Eucalyptus grandis HOM05D004104 ORTHO05D004755 1.9e-39 166.0 97 84.5
Thecc.01G258800 Theobroma cacao HOM05D004104 ORTHO05D004755 1.9e-39 166.0 93 90.3
Haze_24627 Corylus avellana HOM05D005758 ORTHO05D007218 2.5e-39 165.6 97 86.6
Cpa.g.sc50.23 Carica papaya HOM05D004104 ORTHO05D004755 3.2e-39 165.2 97 86.6
Cc06_g07960 Coffea canephora HOM05D004104 ORTHO05D004755 3.2e-39 165.2 93 90.3
Potri.002G038700 Populus trichocarpa HOM05D004104 ORTHO05D004755 3.2e-39 165.2 93 90.3
Glyma.10G036900 Glycine max HOM05D004104 ORTHO05D004755 4.2e-39 164.9 97 85.6
Sabra05G0172700 Salix brachista HOM05D004104 ORTHO05D004755 4.2e-39 164.9 93 89.2
Atru.chr5.1672 Acer truncatum HOM05D004104 ORTHO05D004755 5.5e-39 164.5 93 89.2
MSTRG.18320 Avicennia marina HOM05D004104 ORTHO05D004755 5.5e-39 164.5 93 90.3
Lj5g0006581 Lotus japonicus HOM05D004104 ORTHO05D004755 5.5e-39 164.5 97 85.6
Medtr1g069925 Medicago truncatula HOM05D004104 ORTHO05D004755 5.5e-39 164.5 97 84.5
Psat6g055120 Pisum sativum HOM05D004104 ORTHO05D004755 5.5e-39 164.5 97 85.6
TPR.G24709 Trifolium pratense HOM05D004104 ORTHO05D004755 7.2e-39 164.1 97 84.5
arahy.Tifrunner.gnm1.ann1.QEJR01 Arachis hypogaea HOM05D004104 ORTHO05D004755 9.4e-39 163.7 97 84.5
Migut.D00423 Erythranthe guttata HOM05D004104 ORTHO05D004755 9.4e-39 163.7 93 89.2
Nitab4.5_0000470g0160 Nicotiana tabacum HOM05D004104 ORTHO05D004755 9.4e-39 163.7 99 83.8
Nitab4.5_0009483g0030 Nicotiana tabacum HOM05D004104 ORTHO05D004755 9.4e-39 163.7 99 83.8
Solyc09g072580.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 9.4e-39 163.7 99 83.8
Sopen09g028390 Solanum pennellii HOM05D004104 ORTHO05D004755 9.4e-39 163.7 99 83.8
PGSC0003DMG400010299 Solanum tuberosum HOM05D004104 ORTHO05D004755 9.4e-39 163.7 99 83.8
CSS0037223 Camellia sinensis var. sinensis HOM05D004104 ORTHO05D004755 1.2e-38 163.3 93 89.2
Lalb_Chr21g0313851 Lupinus albus HOM05D004104 ORTHO05D004755 1.2e-38 163.3 93 88.2
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 1.6e-38 162.9 97 84.5
TWI12G1345 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 2.1e-38 162.5 97 83.5
Actinidia25786 Actinidia chinensis HOM05D004104 ORTHO05D004755 2.7e-38 162.2 93 87.1
MSTRG.21496 Avicennia marina HOM05D004104 ORTHO05D004755 2.7e-38 162.2 93 87.1
Duzib211G0552 Durio zibethinus HOM05D004104 ORTHO05D004755 2.7e-38 162.2 97 84.5
THA.LOC104825278 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 2.7e-38 162.2 94 86.2
Sabra02G0031000 Salix brachista HOM05D004104 ORTHO05D004755 3.6e-38 161.8 93 87.1
GSVIVG01028325001 Vitis vinifera HOM05D004104 ORTHO05D004755 3.6e-38 161.8 97 83.5
Gohir.A08G190000 Gossypium hirsutum HOM05D004104 ORTHO05D004755 6.1e-38 161.0 93 87.1
Gohir.D08G208500 Gossypium hirsutum HOM05D004104 ORTHO05D004755 6.1e-38 161.0 93 87.1
Gorai.004G220900 Gossypium raimondii HOM05D004104 ORTHO05D004755 6.1e-38 161.0 93 87.1
QL09p038638 Quercus lobata HOM05D004104 ORTHO05D004755 1.0e-37 160.2 97 82.5
Ca_09886_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 1.4e-37 159.8 97 85.6
Sed0024271 Sechium edule HOM05D004104 ORTHO05D004755 1.4e-37 159.8 97 81.4
CsaV3_7G027350 Cucumis sativus L. HOM05D004104 ORTHO05D004755 1.8e-37 159.5 97 82.5
Sc24g0003130 Simmondsia chinensis HOM05D004104 ORTHO05D004755 1.8e-37 159.5 94 84.0
TPR.G6322 Trifolium pratense HOM05D004104 ORTHO05D004755 1.8e-37 159.5 97 82.5
Ciclev10023660m.g Citrus clementina HOM05D004104 ORTHO05D004755 2.3e-37 159.1 102 83.3
Potri.005G223900 Populus trichocarpa HOM05D004104 ORTHO05D004755 2.3e-37 159.1 93 87.1
PGR044G0499 Punica granatum HOM05D004104 ORTHO05D004755 3.0e-37 158.7 97 80.4
EL10Ac5g10403 Beta vulgaris HOM05D004104 ORTHO05D004755 6.7e-37 157.5 99 78.8
Prupe.8G224100 Prunus persica HOM05D004104 ORTHO05D004755 8.8e-37 157.1 97 79.4
CANSAT01G3088 Cannabis sativa HOM05D004104 ORTHO05D004755 1.1e-36 156.8 93 84.9
ClCG09G007780 Citrullus lanatus HOM05D000113 ORTHO05D004634 1.1e-36 156.8 97 80.4
arahy.Tifrunner.gnm1.ann1.0Z487T Arachis hypogaea HOM05D000348 ORTHO05D000244 4.3e-36 154.8 94 83.0
HanXRQChr04g0112651 Helianthus annuus HOM05D004104 ORTHO05D004755 5.7e-36 154.5 93 82.8
MD10G1184400 Malus domestica HOM05D004104 ORTHO05D004755 7.4e-36 154.1 98 80.6
FvH4_2g21510 Fragaria vesca HOM05D005758 ORTHO05D007218 1.7e-35 152.9 121 65.3
arahy.Tifrunner.gnm1.ann1.6K1PAL Arachis hypogaea HOM05D000348 ORTHO05D000244 2.2e-35 152.5 94 81.9
Gohir.A07G212800 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.2e-35 152.5 93 86.0
AUR62011875 Chenopodium quinoa HOM05D004104 ORTHO05D004755 2.8e-35 152.1 93 80.6
TAR636G3439 Trochodendron aralioides HOM05D004104 ORTHO05D004755 2.8e-35 152.1 95 81.1
Nn3g19649 Nelumbo nucifera HOM05D004104 ORTHO05D004755 1.1e-34 150.2 98 78.6
Hund02913 Selenicereus undatus HOM05D004104 ORTHO05D004755 1.1e-34 150.2 104 75.0
FAN15G0777 Fragaria x ananassa HOM05D005758 ORTHO05D007218 3.1e-34 148.7 97 76.3
FAN27G1683 Fragaria x ananassa HOM05D005758 ORTHO05D007218 3.1e-34 148.7 97 76.3
Glyma.13G123300 Glycine max HOM05D004104 ORTHO05D004755 4.1e-34 148.3 83 89.2
FAN20G0124 Fragaria x ananassa HOM05D004104 ORTHO05D004755 6.9e-34 147.5 97 75.3
Aqoxy2G03638 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 1.2e-33 146.7 99 76.8
CDE04G2476 Ceratophyllum demersum HOM05D004104 ORTHO05D004755 1.5e-33 146.4 99 74.7
Gohir.D07G218900 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.0e-33 146.0 89 86.5
Gorai.001G253400 Gossypium raimondii HOM05D004104 ORTHO05D004755 2.0e-33 146.0 101 79.2
RcHm_v2.0_Chr6g0288171 Rosa chinensis HOM05D004104 ORTHO05D004755 2.0e-33 146.0 97 78.4
Dinv27050 Davidia involucrata HOM05D004104 ORTHO05D004755 2.6e-33 145.6 93 79.6
COL.COLO4_15874 Corchorus olitorius HOM05D004104 ORTHO05D004755 3.4e-33 145.2 93 79.6
Dinv29861 Davidia involucrata HOM05D004104 ORTHO05D004755 4.5e-33 144.8 96 76.0
SEGI_09266 Sequoiadendron giganteum HOM05D004104 ORTHO05D004755 4.5e-33 144.8 90 80.0
SEGI_16929 Sequoiadendron giganteum HOM05D004104 ORTHO05D004755 4.5e-33 144.8 90 80.0
TAR365G1233 Trochodendron aralioides HOM05D004104 ORTHO05D004755 4.5e-33 144.8 89 83.1
CiPaw.01G185000 Carya illinoinensis HOM05D004104 ORTHO05D004755 7.7e-33 144.1 97 76.3
THA.LOC104825277 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 1.3e-32 143.3 82 85.4
Aqoxy2G03648 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 1.7e-32 142.9 90 80.0
PSO357G0016 Papaver somniferum HOM05D004104 ORTHO05D004755 1.7e-32 142.9 99 74.7
MD05G1197800 Malus domestica HOM05D004104 ORTHO05D004755 2.2e-32 142.5 94 78.7
Duzib052G0511 Durio zibethinus HOM05D004104 ORTHO05D004755 5.0e-32 141.4 96 75.0
PSO170G1063 Papaver somniferum HOM05D004104 ORTHO05D004755 6.5e-32 141.0 99 73.7
Thecc.04G255000 Theobroma cacao HOM05D004104 ORTHO05D004755 8.5e-32 140.6 93 77.4
TWI18G1001 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 1.4e-31 139.8 133 60.9
HanXRQChr03g0091411 Helianthus annuus HOM05D004104 ORTHO05D004755 1.9e-31 139.4 97 73.2
Lsat_1_v5_gn_8_92980 Lactuca sativa HOM05D004104 ORTHO05D004755 2.5e-31 139.0 94 78.7
GSVIVG01027809001 Vitis vinifera HOM05D004104 ORTHO05D004755 4.2e-31 138.3 93 78.5
Peaxi162Scf00855g00233 Petunia axillaris HOM05D004104 ORTHO05D004755 7.2e-31 137.5 119 63.9
Lsat_1_v5_gn_3_120420 Lactuca sativa HOM05D004104 ORTHO05D004755 1.6e-30 136.3 97 71.1
Gohir.A02G039300 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.7e-30 135.6 93 73.1
Gohir.D02G045400 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.7e-30 135.6 93 73.1
Gorai.005G050100 Gossypium raimondii HOM05D004104 ORTHO05D004755 2.7e-30 135.6 93 73.1
Atru.chr4.2063 Acer truncatum HOM05D004104 ORTHO05D004755 3.6e-30 135.2 97 70.1
Cc03_g05510 Coffea canephora HOM05D004104 ORTHO05D004755 6.1e-30 134.4 97 69.1
Haze_11377 Corylus avellana HOM05D004104 ORTHO05D004755 1.0e-29 133.7 97 69.1
Manes.03G164300 Manihot esculenta HOM05D004104 ORTHO05D004755 1.0e-29 133.7 97 70.1
Duzib151G0362 Durio zibethinus HOM05D004104 ORTHO05D004755 1.4e-29 133.3 87 78.2
Duzib138G1233 Durio zibethinus HOM05D004104 ORTHO05D004755 1.8e-29 132.9 73 90.4
Mapoly0055s0054 Marchantia polymorpha HOM05D004104 ORTHO05D004755 2.3e-29 132.5 91 75.8
MELO3C015732.2 Cucumis melo HOM05D004104 ORTHO05D004755 3.0e-29 132.1 206 45.6
ECA240G4332 Erigeron canadensis HOM05D004104 ORTHO05D004755 3.0e-29 132.1 97 69.1
Ah.13g072460 Amaranthus hybridus HOM05D004104 ORTHO05D004755 3.9e-29 131.7 90 76.7
AT4G14385 Arabidopsis thaliana HOM05D004104 ORTHO05D004755 5.1e-29 131.3 93 71.0
EL10Ac3g05008 Beta vulgaris HOM05D004104 ORTHO05D004755 6.7e-29 131.0 127 59.1
QL06p017873 Quercus lobata HOM05D004104 ORTHO05D004755 6.7e-29 131.0 97 71.1
Migut.G00520 Erythranthe guttata HOM05D004104 ORTHO05D004755 8.8e-29 130.6 97 68.0
CARHR220610 Cardamine hirsuta HOM05D004104 ORTHO05D004755 1.1e-28 130.2 93 69.9
Hund11888 Selenicereus undatus HOM05D004104 ORTHO05D004755 1.1e-28 130.2 94 73.4
Thhalv10026437m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 1.5e-28 129.8 93 69.9
Oeu011497.1 Olea europaea HOM05D004104 ORTHO05D004755 1.5e-28 129.8 97 67.0
Sp7g12470 Schrenkiella parvula HOM05D004104 ORTHO05D004755 1.5e-28 129.8 93 69.9
BcaC02g09319 Brassica carinata HOM05D004104 ORTHO05D004755 2.0e-28 129.4 93 69.9
A04p07650 Brassica napus HOM05D004104 ORTHO05D004755 2.0e-28 129.4 93 69.9
C04p41340 Brassica napus HOM05D004104 ORTHO05D004755 2.0e-28 129.4 93 69.9
BolC4t25712H Brassica oleracea HOM05D004104 ORTHO05D004755 2.0e-28 129.4 93 69.9
BraA04t16456Z Brassica rapa HOM05D004104 ORTHO05D004755 2.0e-28 129.4 93 69.9
AL7G41830 Arabidopsis lyrata HOM05D004104 ORTHO05D004755 2.6e-28 129.0 93 69.9
Aa31LG9G2930 Aethionema arabicum HOM05D004104 ORTHO05D004755 4.4e-28 128.3 93 68.8
THA.LOC104822244 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 5.7e-28 127.9 93 67.7
Carub.0007s2785 Capsella rubella HOM05D004104 ORTHO05D004755 9.7e-28 127.1 93 67.7
SalBow3G2247 Salvia bowleyana HOM05D004104 ORTHO05D004755 1.3e-27 126.7 97 66.0
Os01g0233400 Oryza sativa ssp. japonica HOM05D004104 ORTHO05D004755 1.7e-27 126.3 86 73.3
Os12g0298600 Oryza sativa ssp. japonica HOM05D004104 ORTHO05D004755 1.7e-27 126.3 86 73.3
BcaB02g08611 Brassica carinata HOM05D004104 ORTHO05D004755 2.8e-27 125.6 89 70.8
ECA236G2125 Erigeron canadensis HOM05D004104 ORTHO05D004755 2.8e-27 125.6 77 83.1
AUR62002135 Chenopodium quinoa HOM05D004104 ORTHO05D004755 3.7e-27 125.2 94 69.1
AUR62015575 Chenopodium quinoa HOM05D004104 ORTHO05D004755 3.7e-27 125.2 93 69.9
Nitab4.5_0001005g0090 Nicotiana tabacum HOM05D004104 ORTHO05D004755 4.8e-27 124.8 97 68.0
Nitab4.5_0000044g0340 Nicotiana tabacum HOM05D004104 ORTHO05D004755 6.3e-27 124.4 97 68.0
unitig_21.g20174 Utricularia gibba HOM05D004104 ORTHO05D004755 6.3e-27 124.4 98 64.3
Pp3c8_15220 Physcomitrium patens HOM05D004104 ORTHO05D004755 8.2e-27 124.0 93 66.7
Actinidia01846 Actinidia chinensis HOM05D004104 ORTHO05D004755 1.4e-26 123.2 93 66.7
Ciclev10006103m.g Citrus clementina HOM05D004104 ORTHO05D004755 1.8e-26 122.9 92 66.3
Dinv34620 Davidia involucrata HOM05D004104 ORTHO05D004755 1.8e-26 122.9 72 84.7
Ah.04g155820 Amaranthus hybridus HOM05D004104 ORTHO05D004755 5.3e-26 121.3 104 62.5
CBR_g31961 Chara braunii HOM05D004104 ORTHO05D004755 7.0e-26 120.9 88 68.2
Solyc09g090120.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 7.0e-26 120.9 97 66.0
Sopen09g033030 Solanum pennellii HOM05D004104 ORTHO05D004755 7.0e-26 120.9 97 66.0
arahy.Tifrunner.gnm1.ann1.2HR6HW Arachis hypogaea HOM05D004104 ORTHO05D004755 9.1e-26 120.6 70 84.3
Lj1A66T60 Lonicera japonica HOM05D004104 ORTHO05D004755 1.2e-25 120.2 93 64.5
Pp3c24_15450 Physcomitrium patens HOM05D004104 ORTHO05D004755 3.5e-25 118.6 93 65.6
Rhsim02G0037300 Rhododendron simsii HOM05D004104 ORTHO05D004755 7.7e-25 117.5 92 63.0
vmacro15441 Vaccinium macrocarpon HOM05D004104 ORTHO05D004755 1.1e-23 113.6 83 67.5
AagrBONN_evm.TU.Sc2ySwM_228.2514 Anthoceros agrestis HOM05D004104 ORTHO05D004755 1.9e-23 112.8 83 68.7
MSTRG.9892 Avicennia marina HOM05D004104 ORTHO05D004755 5.5e-23 111.3 83 68.7
AagrBONN_evm.TU.Sc2ySwM_368.1944 Anthoceros agrestis HOM05D004104 ORTHO05D004755 6.1e-22 107.8 82 65.9
HPP92_008311 Vanilla planifolia HOM05D004104 ORTHO05D004755 3.0e-21 105.5 99 51.5
Ah.11g049720 Amaranthus hybridus HOM05D004104 ORTHO05D004755 5.7e-20 101.3 60 80.0
MBI10_g37181_MAGBIO Magnolia biondii HOM05D004104 ORTHO05D004755 5.7e-20 101.3 59 83.1
HPP92_004791 Vanilla planifolia HOM05D004104 ORTHO05D004755 4.8e-19 98.2 60 76.7
MCO10G151 Micromonas commoda HOM05D004104 ORTHO05D004755 1.4e-18 96.7 75 62.7
Thhalv10002280m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 2.4e-18 95.9 99 58.6
Thhalv10029502m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 5.9e-17 91.3 89 59.6
PRCOL_00002727 Prasinoderma coloniale HOM05D004104 ORTHO05D004755 7.7e-17 90.9 80 53.8
Zm00001eb188390 Zea mays HOM05D004104 ORTHO05D004755 3.8e-16 88.6 61 72.1
SGA_v2.0_scaffold67G22747 Striga asiatica HOM05D004104 ORTHO05D004755 4.2e-15 85.1 97 49.5
Actinidia32304 Actinidia chinensis HOM05D004104 ORTHO05D004755 9.4e-15 84.0 61 67.2
Gohir.D03G080833 Gossypium hirsutum HOM05D004104 ORTHO05D004755 5.2e-13 78.2 58 65.5
THA.LOC104825261 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 5.2e-13 78.2 41 87.8
Gorai.003G083000 Gossypium raimondii HOM05D004104 ORTHO05D004755 2.0e-12 76.3 58 65.5
arahy.Tifrunner.gnm1.ann1.A8QM82 Arachis hypogaea HOM05D004104 ORTHO05D004755 7.5e-12 74.3 46 73.9
Actinidia11346 Actinidia chinensis HOM05D004104 ORTHO05D004755 1.1e-10 70.5 66 53.0
PGSC0003DMG400017224 Solanum tuberosum HOM05D004104 ORTHO05D004755 1.4e-10 70.1 65 56.9
SHI09794 Sapria himalayana HOM05D004104 ORTHO05D004755 5.9e-09 64.7 41 75.6
Peaxi162Scf00543g00310 Petunia axillaris HOM05D004104 ORTHO05D004755 7.7e-09 64.3 88 48.9
Cre06.g291200 Chlamydomonas reinhardtii HOM05D004104 ORTHO05D004755 2.2e-08 62.8 86 44.2
Cre07.g328450 Chlamydomonas reinhardtii HOM05D004104 ORTHO05D004755 1.1e-07 60.5 76 44.7


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