Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 1.7e-179 632.9 402 100.0
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.8e-150 535.8 332 87.3
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 2.8e-150 535.8 333 87.4
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 2.8e-150 535.8 324 87.0
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 3.1e-149 532.3 332 87.0
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 2.8e-145 519.2 338 82.2
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 6.1e-145 518.1 329 83.9
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 1.4e-144 516.9 335 84.5
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 2.3e-144 516.2 362 79.6
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 5.2e-144 515.0 337 81.9
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 1.5e-143 513.5 331 82.8
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 2.0e-143 513.1 329 83.9
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 4.4e-143 511.9 330 82.7
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 4.4e-143 511.9 324 83.3
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 5.7e-143 511.5 331 81.6
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 2.2e-142 509.6 330 81.5
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 4.9e-142 508.4 333 83.5
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 8.3e-142 507.7 316 83.9
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 1.1e-141 507.3 318 85.5
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 1.1e-141 507.3 338 81.7
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 2.4e-141 506.1 327 83.5
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 1.2e-140 503.8 339 79.9
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 3.5e-140 502.3 355 77.2
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 2.3e-139 499.6 331 82.2
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 8.6e-139 497.7 324 81.8
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 8.6e-139 497.7 332 80.7
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 5.6e-138 495.0 320 82.8
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 3.1e-136 489.2 325 79.7
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 4.4e-135 485.3 342 76.9
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 9.8e-135 484.2 334 79.6
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 9.8e-135 484.2 334 79.6
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 1.7e-134 483.4 353 77.1
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 2.9e-134 482.6 313 83.1
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 2.9e-134 482.6 313 83.1
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 3.7e-134 482.3 347 74.9
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 8.3e-134 481.1 339 77.6
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 1.9e-133 479.9 344 75.9
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.9e-133 479.9 339 79.4
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 2.4e-133 479.6 326 79.4
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 3.2e-133 479.2 322 78.9
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 7.0e-133 478.0 336 77.4
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 9.2e-133 477.6 310 80.6
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 2.7e-132 476.1 339 77.9
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 5.0e-131 471.9 326 79.8
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 8.6e-131 471.1 326 77.6
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 1.9e-130 469.9 285 83.5
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 2.5e-130 469.5 341 76.5
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 4.3e-130 468.8 325 78.5
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 4.3e-130 468.8 369 71.8
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 4.3e-130 468.8 319 78.1
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 5.6e-130 468.4 330 75.5
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 2.8e-129 466.1 266 89.8
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 6.2e-129 464.9 337 73.0
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 8.1e-129 464.5 328 77.1
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 8.1e-129 464.5 328 76.2
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 2.3e-128 463.0 338 72.8
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 2.3e-128 463.0 321 77.6
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 4.0e-128 462.2 343 74.6
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 8.9e-128 461.1 328 74.1
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.2e-127 460.7 327 75.5
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 1.5e-127 460.3 330 74.8
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 1.5e-127 460.3 335 75.2
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 2.6e-127 459.5 322 75.5
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 3.4e-127 459.1 332 74.7
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 4.4e-127 458.8 328 74.7
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 4.4e-127 458.8 330 74.8
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 4.4e-127 458.8 330 74.5
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 9.8e-127 457.6 322 75.8
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.3e-126 457.2 328 74.7
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.7e-126 456.8 329 74.5
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 2.2e-126 456.4 324 77.5
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.7e-126 455.7 330 76.4
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.3e-126 454.5 329 76.6
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.3e-126 454.5 329 76.6
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.9e-125 453.4 337 76.0
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 2.4e-125 453.0 331 73.4
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 4.1e-125 452.2 332 75.3
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 5.4e-125 451.8 324 75.3
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 5.4e-125 451.8 263 88.6
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 1.6e-124 450.3 336 74.1
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 3.5e-124 449.1 293 80.2
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 1.0e-123 447.6 325 76.9
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 2.3e-123 446.4 322 75.5
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 8.6e-123 444.5 319 74.6
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 1.9e-122 443.4 332 71.7
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 4.0e-120 435.6 364 67.9
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.6e-119 431.4 339 72.9
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 9.9e-119 431.0 399 64.2
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 6.4e-118 428.3 328 70.1
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 1.9e-117 426.8 324 72.8
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 8.6e-115 417.9 332 69.6
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 5.2e-112 408.7 358 66.2
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 3.4e-111 406.0 298 75.5
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 1.3e-110 404.1 303 73.9
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.8e-110 402.5 319 70.8
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.0e-108 395.2 319 70.8
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 1.5e-106 390.6 248 80.2
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 4.8e-105 385.6 241 80.9
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 1.1e-101 374.4 268 69.8
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 1.4e-101 374.0 286 68.9
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 3.2e-101 372.9 269 68.8
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 6.0e-100 368.6 331 62.2
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 4.3e-98 362.5 327 63.0
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.9e-94 349.7 224 82.1
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.3e-91 340.9 269 65.4
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 1.8e-91 340.5 273 64.8
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 3.0e-91 339.7 370 57.6
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 7.4e-90 335.1 368 54.6
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 7.4e-90 335.1 368 54.6
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 8.1e-89 331.6 246 72.0
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 6.5e-86 322.0 337 58.8
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 7.4e-82 308.5 261 59.8
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 8.2e-81 305.1 318 52.5
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 9.0e-80 301.6 334 50.6
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 2.1e-76 290.4 213 70.9
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 2.2e-73 280.4 171 88.3
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.3e-70 271.2 214 71.5
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 1.7e-70 270.8 288 58.7
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 3.5e-55 219.9 210 58.6
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 8.2e-49 198.7 175 61.7
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.3e-48 196.1 163 68.7
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.0e-35 155.2 109 78.9
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.8e-28 130.6 106 60.4
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 6.8e-27 125.9 93 67.7
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.0e-22 112.1 103 68.9
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.8e-19 101.3 267 28.1
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 4.0e-19 100.1 255 29.8
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 2.2e-17 94.4 62 69.4
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.1e-16 92.0 114 45.6
CARHR184250 Cardamine hirsuta HOM05D005952 ORTHO05D007262 1.0e-06 58.9 52 55.8
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 2.3e-06 57.8 38 68.4


User provided reference genes

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