Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 0.0e+00 1143.3 621 100.0
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 1.1e-132 478.0 630 53.3
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 1.2e-128 464.5 639 52.0
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 3.2e-124 449.9 500 54.0
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 3.5e-123 446.4 630 51.9
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 8.6e-122 441.8 501 54.9
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 5.6e-121 439.1 493 55.2
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 4.7e-120 436.0 481 54.5
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 2.2e-117 427.2 504 52.4
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 3.8e-117 426.4 511 52.4
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 6.4e-117 425.6 491 54.0
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 3.2e-116 423.3 488 53.9
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 7.8e-115 418.7 486 53.3
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 3.9e-114 416.4 490 53.5
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 1.9e-113 414.1 428 56.3
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 2.5e-113 413.7 500 52.6
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 8.1e-112 408.7 492 51.4
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 1.1e-111 408.3 439 53.3
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 1.2e-110 404.8 557 47.8
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 4.4e-110 402.9 529 48.6
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 4.9e-109 399.4 490 51.6
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 2.4e-108 397.1 468 53.4
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 2.4e-108 397.1 468 53.4
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 9.3e-108 395.2 483 51.6
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 2.7e-107 393.7 487 50.7
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 1.7e-106 391.0 498 52.4
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 8.7e-106 388.7 484 50.2
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 4.8e-104 382.9 490 49.4
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 5.3e-103 379.4 578 44.6
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 7.6e-102 375.6 531 47.6
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 1.9e-100 370.9 417 53.2
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 1.2e-99 368.2 473 48.0
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 3.3e-97 360.1 480 48.1
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 4.0e-95 353.2 530 47.2
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 9.0e-95 352.1 482 47.9
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 1.0e-93 348.6 496 46.0
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 2.9e-93 347.1 505 45.3
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 7.1e-92 342.4 496 47.8
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 1.2e-91 341.7 417 52.5
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 4.6e-91 339.7 532 46.4
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 2.5e-89 334.0 537 45.3
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 7.4e-89 332.4 447 49.0
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 9.6e-89 332.0 544 44.5
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 5.3e-87 326.2 439 48.5
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 6.9e-87 325.9 439 48.3
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 1.0e-85 322.0 561 43.3
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 1.7e-85 321.2 453 47.7
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.7e-85 321.2 546 43.6
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 3.8e-85 320.1 436 48.6
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 5.0e-85 319.7 529 45.0
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 5.0e-85 319.7 466 45.7
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 1.1e-84 318.5 448 47.3
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 1.4e-84 318.2 467 47.3
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 4.6e-83 313.2 407 48.2
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 7.9e-83 312.4 431 46.2
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 1.3e-80 305.1 515 44.3
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 4.8e-80 303.1 517 43.3
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 2.4e-79 300.8 489 44.0
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 3.1e-79 300.4 388 50.0
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 5.3e-79 299.7 412 46.8
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 5.3e-79 299.7 412 46.8
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 1.2e-78 298.5 471 46.9
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 1.5e-78 298.1 475 44.8
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 3.4e-78 297.0 550 42.7
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 1.1e-76 292.0 480 43.3
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 2.1e-75 287.7 438 44.3
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 2.7e-75 287.3 467 46.3
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 6.1e-75 286.2 435 46.7
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 1.0e-74 285.4 523 42.3
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 1.4e-74 285.0 428 44.6
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 5.1e-74 283.1 437 45.8
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 6.7e-74 282.7 451 45.0
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 6.7e-74 282.7 542 42.1
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 8.8e-74 282.3 529 42.3
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 7.4e-73 279.3 464 44.2
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 1.7e-72 278.1 499 42.9
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 2.4e-71 274.2 499 42.1
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 3.1e-71 273.9 431 43.9
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 4.1e-71 273.5 387 48.3
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 5.3e-71 273.1 366 48.1
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 2.0e-70 271.2 438 43.8
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 2.0e-70 271.2 452 44.2
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 4.5e-70 270.0 311 51.8
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 4.5e-70 270.0 418 46.2
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 4.5e-70 270.0 494 40.1
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 1.3e-69 268.5 569 38.3
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 1.7e-69 268.1 437 43.7
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 2.9e-69 267.3 472 41.5
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 5.0e-69 266.5 433 44.8
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 6.5e-69 266.2 434 42.9
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 1.1e-68 265.4 456 42.5
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 1.1e-68 265.4 415 45.8
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 1.1e-68 265.4 434 42.9
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 1.1e-68 265.4 371 48.2
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 9.4e-68 262.3 675 33.9
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 2.1e-67 261.2 451 43.2
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 3.6e-67 260.4 410 44.1
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 4.7e-67 260.0 434 42.2
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 2.6e-65 254.2 519 39.9
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 2.6e-65 254.2 445 42.0
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 2.8e-64 250.8 434 40.8
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 2.8e-64 250.8 391 44.8
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 3.7e-64 250.4 419 41.3
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 4.8e-64 250.0 366 46.7
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 1.1e-63 248.8 433 41.6
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 1.1e-63 248.8 433 41.6
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 1.8e-63 248.1 427 41.5
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 3.1e-63 247.3 494 40.1
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 9.1e-63 245.7 424 41.5
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 2.0e-62 244.6 283 52.3
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 2.0e-62 244.6 283 53.4
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 5.5e-60 236.5 399 44.4
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 8.0e-59 232.6 209 61.2
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 1.4e-58 231.9 447 40.3
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 4.4e-57 226.9 470 38.5
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 1.3e-56 225.3 463 38.4
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 7.0e-55 219.5 472 39.0
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 1.3e-53 215.3 470 38.7
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 2.9e-53 214.2 405 39.5
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 5.0e-53 213.4 190 62.6
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 1.1e-52 212.2 385 40.3
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 1.5e-52 211.8 201 56.7
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 2.5e-52 211.1 212 55.7
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 5.5e-52 209.9 391 42.2
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 8.0e-51 206.1 374 38.5
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 3.4e-49 200.7 409 39.6
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 4.8e-48 196.8 469 35.8
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 5.9e-46 189.9 471 36.3
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 1.7e-45 188.3 326 42.3
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 3.8e-45 187.2 262 43.9
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 1.5e-44 185.3 480 35.8
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.2e-41 175.6 231 45.9
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 6.3e-40 169.9 236 47.5
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 4.5e-38 163.7 187 46.5
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 5.9e-38 163.3 156 52.6
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 3.6e-35 154.1 256 42.6
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 3.0e-34 151.0 180 46.1
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 5.2e-34 150.2 169 49.1
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 2.0e-33 148.3 217 43.8
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 1.7e-32 145.2 181 46.4
DCAR_012988 Daucus carota HOM05D004586 ORTHO05D005266 1.1e-28 132.5 280 37.9
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 8.3e-24 116.3 133 50.4
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 4.1e-23 114.0 96 61.5
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 2.3e-21 108.2 138 48.6
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 1.1e-15 89.4 71 57.7
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 1.0e-13 82.8 66 60.6
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 3.3e-12 77.8 126 34.9
Hma1.2p1_1100F.1_g257070 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 4.3e-12 77.4 194 33.5
MCO05G032 Micromonas commoda HOM05D004586 ORTHO05D005266 3.6e-11 74.3 232 28.9
AL2G23840 Arabidopsis lyrata HOM05D020923 ORTHO05D021440 7.6e-09 66.6 100 39.0


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