Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 1.6e-291 1005.4 501 100.0
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 6.9e-247 857.1 494 85.0
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 4.5e-238 827.8 493 82.2
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 3.8e-237 824.7 573 73.3
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 9.4e-236 820.1 496 81.0
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 6.3e-232 807.4 486 81.9
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 6.3e-232 807.4 496 80.6
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.1e-231 806.6 496 81.0
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 1.1e-231 806.6 496 81.0
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 7.0e-231 803.9 493 80.3
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 5.0e-229 797.7 486 80.5
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 6.1e-227 790.8 476 80.9
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.2e-225 786.6 464 82.5
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 1.7e-224 782.7 482 79.7
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 1.1e-223 780.0 495 78.0
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 1.8e-223 779.2 479 81.4
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 3.1e-223 778.5 494 77.5
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 5.4e-223 777.7 487 78.4
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 5.4e-223 777.7 486 77.8
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 1.2e-222 776.5 492 79.1
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 2.8e-219 765.4 494 76.5
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 8.0e-219 763.8 491 76.2
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 8.9e-218 760.4 498 75.3
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 8.9e-218 760.4 523 73.2
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 1.5e-217 759.6 485 76.3
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 1.5e-217 759.6 487 76.0
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.5e-217 759.6 518 73.9
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 9.8e-217 756.9 486 75.7
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 4.1e-215 751.5 469 77.0
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 7.0e-215 750.7 487 75.6
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 7.0e-215 750.7 469 78.0
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 7.0e-215 750.7 486 75.1
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 9.2e-215 750.4 494 74.7
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 3.5e-214 748.4 463 77.8
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 4.5e-214 748.0 476 75.2
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 7.8e-214 747.3 492 75.2
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 3.8e-213 745.0 495 73.3
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 3.8e-213 745.0 466 76.8
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.1e-212 743.4 489 74.0
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 1.5e-212 743.0 493 74.0
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.9e-212 742.7 489 74.4
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 5.6e-212 741.1 448 80.8
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 9.5e-212 740.3 493 74.2
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 9.5e-212 740.3 493 74.2
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 6.1e-211 737.6 492 74.4
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 1.4e-210 736.5 498 73.1
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 6.8e-210 734.2 493 74.2
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 9.8e-209 730.3 493 72.8
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 1.7e-208 729.6 458 77.5
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 3.7e-208 728.4 457 77.9
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.4e-207 726.5 487 73.7
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 2.4e-207 725.7 507 71.6
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 3.2e-207 725.3 457 76.6
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 1.2e-206 723.4 457 76.4
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 3.5e-206 721.8 561 66.5
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 4.6e-206 721.5 487 73.9
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 4.7e-203 711.4 457 76.1
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 8.0e-203 710.7 472 72.7
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 2.0e-201 706.1 495 69.7
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 7.5e-201 704.1 472 72.5
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 9.8e-201 703.7 493 69.4
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 2.2e-200 702.6 493 69.6
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 2.2e-200 702.6 443 79.9
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 2.9e-200 702.2 493 72.0
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 6.4e-200 701.0 472 71.8
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 8.3e-200 700.7 493 69.2
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 3.2e-199 698.7 470 72.3
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 3.2e-199 698.7 491 71.7
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 4.1e-199 698.4 470 72.3
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 1.2e-198 696.8 470 72.6
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 1.7e-197 693.0 489 71.6
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 8.6e-197 690.6 472 71.2
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 9.5e-196 687.2 450 73.6
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 1.6e-195 686.4 494 68.6
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 5.8e-193 677.9 493 71.4
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 1.4e-191 673.3 503 67.8
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 1.6e-190 669.8 493 66.1
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 7.8e-190 667.5 478 70.3
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.9e-188 662.9 489 68.3
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 1.2e-187 660.2 482 66.2
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 2.8e-187 659.1 411 77.9
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 6.8e-186 654.4 454 70.5
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 5.8e-185 651.4 452 71.7
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 7.6e-185 651.0 515 65.6
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 6.4e-184 647.9 458 69.7
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.6e-182 643.3 487 66.9
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 1.7e-168 596.7 399 69.7
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 3.5e-166 589.0 448 68.5
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 2.5e-164 582.8 387 73.9
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 4.3e-164 582.0 335 85.1
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 4.2e-159 565.5 455 59.1
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 5.6e-156 555.1 466 57.3
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 3.1e-154 549.3 458 57.2
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 1.1e-143 514.2 358 69.6
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 1.8e-141 506.9 455 58.9
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 4.3e-140 502.3 492 56.1
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 6.9e-138 495.0 503 55.9
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 4.5e-129 465.7 303 75.9
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 1.0e-128 464.5 389 63.2
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 1.3e-112 411.0 475 43.2
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.5e-111 407.5 228 83.3
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 8.8e-109 398.3 439 51.9
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 2.0e-108 397.1 365 54.2
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 7.2e-103 378.6 218 79.4
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 9.8e-100 368.2 253 68.4
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 3.2e-90 336.7 235 72.3
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 1.9e-87 327.4 246 66.7
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 3.3e-87 326.6 380 43.7
Cpa.g.sc132.4 Carica papaya HOM05D002380 ORTHO05D008286 4.9e-51 206.5 114 86.0
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.0e-44 184.5 160 60.0
CBR_g8452 Chara braunii HOM05D002380 ORTHO05D008286 7.6e-44 182.6 149 55.0
Aqoxy1G02984 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 7.4e-39 166.0 99 74.7
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 3.8e-35 153.7 190 50.0
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 1.3e-32 145.2 94 70.2
Gohir.A07G186850 Gossypium hirsutum HOM05D002380 ORTHO05D026288 4.2e-26 123.6 78 82.1
SEGI_28059 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 5.1e-24 116.7 69 76.8
SEGI_31657 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 5.9e-20 103.2 70 70.0
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 7.4e-15 86.3 92 41.3
Actinidia09729 Actinidia chinensis HOM05D002380 ORTHO05D026288 4.8e-14 83.6 74 62.2
MBI19_g40900_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.2e-12 79.0 50 74.0
SEGI_40123 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.2e-11 74.7 42 78.6
Lalb_Chr04g0249911 Lupinus albus HOM05D002380 ORTHO05D026288 1.5e-10 72.0 43 79.1
Lj1P772T14 Lonicera japonica HOM05D002380 ORTHO05D008286 4.2e-10 70.5 77 53.2
CAN.G96.10 Capsicum annuum HOM05D002380 ORTHO05D026288 1.0e-08 65.9 40 77.5


User provided reference genes

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