Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G024400 Manihot esculenta HOM05D000225 ORTHO05D002520 7.3e-124 447.2 219 100.0
Manes.13G026000 Manihot esculenta HOM05D000225 ORTHO05D002520 5.8e-65 251.5 215 60.5
Ciclev10033617m.g Citrus clementina HOM05D000225 ORTHO05D002520 9.6e-60 234.2 220 55.0
Dinv24806 Davidia involucrata HOM05D000225 ORTHO05D002520 1.6e-59 233.4 185 59.5
Haze_12234 Corylus avellana HOM05D000225 ORTHO05D002520 3.8e-56 222.2 217 51.6
Eucgr.H02518 Eucalyptus grandis HOM05D000225 ORTHO05D002520 3.8e-56 222.2 217 53.9
MBI10_g00732_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 6.5e-56 221.5 180 58.3
Manes.06G108500 Manihot esculenta HOM05D000225 ORTHO05D002520 1.9e-55 219.9 216 49.5
TAR371G0870 Trochodendron aralioides HOM05D000225 ORTHO05D002520 1.9e-55 219.9 208 52.4
Gohir.D02G159800 Gossypium hirsutum HOM05D000225 ORTHO05D002520 2.3e-53 213.0 201 53.2
Gorai.005G179900 Gossypium raimondii HOM05D000225 ORTHO05D002520 2.3e-53 213.0 201 53.2
Duzib251G0491 Durio zibethinus HOM05D000225 ORTHO05D002520 3.0e-53 212.6 213 53.5
FvH4_4g25871 Fragaria vesca HOM05D000225 ORTHO05D002520 3.0e-53 212.6 219 49.8
FAN12G1520 Fragaria x ananassa HOM05D000740 ORTHO05D002520 3.9e-53 212.2 219 50.2
Thecc.02G257100 Theobroma cacao HOM05D000225 ORTHO05D002520 3.9e-53 212.2 213 53.1
Atru.chr9.2548 Acer truncatum HOM05D000225 ORTHO05D002520 6.7e-53 211.5 200 50.0
FAN07G0546 Fragaria x ananassa HOM05D000740 ORTHO05D002520 8.7e-53 211.1 219 50.2
FAN07G1090 Fragaria x ananassa HOM05D000740 ORTHO05D002520 8.7e-53 211.1 219 50.2
Gohir.A03G136600 Gossypium hirsutum HOM05D000225 ORTHO05D002520 8.7e-53 211.1 201 53.2
GSVIVG01004091001 Vitis vinifera HOM05D000225 ORTHO05D002520 1.1e-52 210.7 186 54.8
Cpa.g.sc33.2 Carica papaya HOM05D000225 ORTHO05D002520 2.5e-52 209.5 216 52.8
MD16G1098600 Malus domestica HOM05D000225 ORTHO05D002520 2.5e-52 209.5 221 50.2
FAN12G1195 Fragaria x ananassa HOM05D000740 ORTHO05D002520 3.3e-52 209.1 219 49.8
Prupe.1G247900 Prunus persica HOM05D000225 ORTHO05D002520 4.3e-52 208.8 210 50.0
Cc11_g15550 Coffea canephora HOM05D000225 ORTHO05D002520 5.7e-52 208.4 197 53.8
Potri.015G081601 Populus trichocarpa HOM05D000225 ORTHO05D002520 1.3e-51 207.2 217 45.6
Potri.T125208 Populus trichocarpa HOM05D000225 ORTHO05D002520 1.3e-51 207.2 217 45.6
TWI39G0501 Tripterygium wilfordii HOM05D000225 ORTHO05D002520 1.6e-51 206.8 205 48.8
Aqoxy3G01157 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 2.2e-51 206.5 195 51.3
Hma1.2p1_0223F.1_g094140 Hydrangea macrophylla HOM05D000225 ORTHO05D002520 3.7e-51 205.7 202 52.0
FAN22G2293 Fragaria x ananassa HOM05D000225 ORTHO05D002520 6.3e-51 204.9 210 48.6
MBI16_g23850_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 1.1e-50 204.1 205 51.2
Solyc06g069610.1 Solanum lycopersicum HOM05D000225 ORTHO05D002520 1.1e-50 204.1 209 51.2
FAN17G1047 Fragaria x ananassa HOM05D000740 ORTHO05D002520 1.8e-50 203.4 218 48.2
Sopen06g026910 Solanum pennellii HOM05D000225 ORTHO05D002520 1.8e-50 203.4 209 51.2
Lj6A811T76 Lonicera japonica HOM05D000225 ORTHO05D002520 2.4e-50 203.0 185 54.6
Actinidia37418 Actinidia chinensis HOM05D000225 ORTHO05D002520 5.3e-50 201.8 213 50.7
CAN.G587.20 Capsicum annuum HOM05D000225 ORTHO05D002520 5.3e-50 201.8 211 48.8
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 5.3e-50 201.8 214 54.2
Aqoxy3G01156 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 1.2e-49 200.7 216 47.2
COL.COLO4_30151 Corchorus olitorius HOM05D000225 ORTHO05D002520 3.4e-49 199.1 186 48.9
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 3.8e-48 195.7 186 51.6
TPR.G38785 Trifolium pratense HOM05D000225 ORTHO05D002520 6.5e-48 194.9 207 45.4
Rhsim12G0112300 Rhododendron simsii HOM05D000225 ORTHO05D002520 1.1e-47 194.1 198 50.0
Peaxi162Scf00013g00053 Petunia axillaris HOM05D000225 ORTHO05D002520 2.5e-47 193.0 188 51.6
Thecc.03G022500 Theobroma cacao HOM05D000225 ORTHO05D002520 2.5e-47 193.0 215 44.7
Atru.chr11.2135 Acer truncatum HOM05D000225 ORTHO05D002520 3.2e-47 192.6 185 51.9
RcHm_v2.0_Chr4g0433311 Rosa chinensis HOM05D000225 ORTHO05D002520 9.4e-47 191.0 218 47.7
Atru.chr11.2119 Acer truncatum HOM05D000225 ORTHO05D002520 1.2e-46 190.7 223 47.5
DCAR_005851 Daucus carota HOM05D000225 ORTHO05D002520 1.2e-46 190.7 218 50.0
Lj2g0016247 Lotus japonicus HOM05D000225 ORTHO05D002520 1.6e-46 190.3 175 50.3
Lj4g0021993 Lotus japonicus HOM05D000225 ORTHO05D002520 1.6e-46 190.3 206 49.5
CANSAT01G1082 Cannabis sativa HOM05D000225 ORTHO05D002520 3.6e-46 189.1 212 48.1
Glyma.08G283300 Glycine max HOM05D000225 ORTHO05D002520 6.1e-46 188.3 202 47.0
MD06G1169200 Malus domestica HOM05D000225 ORTHO05D002520 2.3e-45 186.4 180 50.6
DCAR_026528 Daucus carota HOM05D000740 ORTHO05D003236 3.9e-45 185.7 218 50.0
Glyma.01G027100 Glycine max HOM05D000225 ORTHO05D002520 3.9e-45 185.7 213 46.0
CSS0023507 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D002520 8.8e-45 184.5 215 47.4
Lalb_Chr16g0382021 Lupinus albus HOM05D000225 ORTHO05D002520 1.1e-44 184.1 211 43.6
Eucgr.B00237 Eucalyptus grandis HOM05D000225 ORTHO05D002520 4.4e-44 182.2 176 50.6
HanXRQChr06g0174451 Helianthus annuus HOM05D000225 ORTHO05D002520 4.4e-44 182.2 196 47.4
Medtr5g033490 Medicago truncatula HOM05D000225 ORTHO05D002520 1.3e-43 180.6 201 43.3
Prupe.5G168000 Prunus persica HOM05D000225 ORTHO05D002520 1.3e-43 180.6 181 52.5
Nitab4.5_0006673g0100 Nicotiana tabacum HOM05D000225 ORTHO05D002520 4.8e-43 178.7 196 47.4
Phvul.002G059500 Phaseolus vulgaris HOM05D000225 ORTHO05D002520 4.8e-43 178.7 215 41.9
PGSC0003DMG400037297 Solanum tuberosum HOM05D000225 ORTHO05D002520 4.8e-43 178.7 209 47.8
Psat2g094040 Pisum sativum HOM05D000225 ORTHO05D002520 8.2e-43 177.9 202 42.6
PGR119G1031 Punica granatum HOM05D000225 ORTHO05D002520 1.2e-41 174.1 211 44.5
Lj9A444G106 Lonicera japonica HOM05D000225 ORTHO05D002520 2.6e-41 172.9 152 55.9
FAN18G4107 Fragaria x ananassa HOM05D000225 ORTHO05D002520 4.5e-41 172.2 206 44.2
Lsat_1_v5_gn_3_28821 Lactuca sativa HOM05D000225 ORTHO05D002520 5.9e-41 171.8 181 47.0
VMungo0251G0993 Vigna mungo HOM05D000225 ORTHO05D002520 7.7e-41 171.4 201 43.3
FAN08G1117 Fragaria x ananassa HOM05D000225 ORTHO05D002520 1.3e-40 170.6 206 44.7
VMungo1215G0379 Vigna mungo HOM05D000225 ORTHO05D002520 1.3e-40 170.6 215 41.4
FvH4_5g05950 Fragaria vesca HOM05D000225 ORTHO05D002520 1.7e-40 170.2 206 43.7
FAN13G0456 Fragaria x ananassa HOM05D000225 ORTHO05D002520 1.1e-39 167.5 206 44.2
CAN.G298.29 Capsicum annuum HOM05D000225 ORTHO05D002520 1.4e-39 167.2 215 44.2
arahy.Tifrunner.gnm1.ann1.7J5ZWH Arachis hypogaea HOM05D000225 ORTHO05D002520 1.9e-39 166.8 188 46.3
Oeu059915.1 Olea europaea HOM05D000225 ORTHO05D002520 1.9e-39 166.8 216 43.5
Phvul.003G063700 Phaseolus vulgaris HOM05D000225 ORTHO05D002520 1.9e-39 166.8 200 43.5
arahy.Tifrunner.gnm1.ann1.6V1TUE Arachis hypogaea HOM05D000225 ORTHO05D002520 5.5e-39 165.2 188 46.3
CsaV3_5G031250 Cucumis sativus L. HOM05D000225 ORTHO05D002520 1.2e-38 164.1 178 48.3
HanXRQChr05g0154581 Helianthus annuus HOM05D000225 ORTHO05D002520 2.7e-38 162.9 186 43.0
MELO3C011965.2 Cucumis melo HOM05D000225 ORTHO05D002520 3.6e-38 162.5 209 44.0
Migut.L01480 Erythranthe guttata HOM05D000225 ORTHO05D002520 2.3e-37 159.8 186 45.2
Sed0021349 Sechium edule HOM05D000225 ORTHO05D002520 1.5e-36 157.1 198 44.4
FAN04G2503 Fragaria x ananassa HOM05D000225 ORTHO05D002520 1.7e-35 153.7 206 42.2
ClCG05G025640 Citrullus lanatus HOM05D000225 ORTHO05D002520 4.8e-35 152.1 188 45.2
ECA246G1268 Erigeron canadensis HOM05D000225 ORTHO05D009144 8.2e-35 151.4 178 41.0
arahy.Tifrunner.gnm1.ann1.P7CPN3 Arachis hypogaea HOM05D000225 ORTHO05D002520 5.3e-34 148.7 227 40.5
ATR0585G088 Amborella trichopoda HOM05D000225 ORTHO05D002520 1.6e-33 147.1 205 41.0
arahy.Tifrunner.gnm1.ann1.REE5L6 Arachis hypogaea HOM05D000225 ORTHO05D002520 1.6e-33 147.1 227 40.1
MD13G1097500 Malus domestica HOM05D000225 ORTHO05D002520 1.6e-33 147.1 173 42.8
Eucgr.B00236 Eucalyptus grandis HOM05D000225 ORTHO05D002520 4.5e-33 145.6 176 42.6
Nitab4.5_0003021g0010 Nicotiana tabacum HOM05D000225 ORTHO05D002520 6.1e-30 135.2 119 55.5
Lsat_1_v5_gn_5_15880 Lactuca sativa HOM05D000225 ORTHO05D002520 1.8e-29 133.7 209 37.3
MSTRG.572 Avicennia marina HOM05D000225 ORTHO05D002520 1.7e-27 127.1 158 40.5
TAR629G3395 Trochodendron aralioides HOM05D000225 ORTHO05D002520 2.2e-24 116.7 102 52.9
PSO017G6892 Papaver somniferum HOM05D000225 ORTHO05D002520 2.9e-24 116.3 112 52.7
HPP92_006406 Vanilla planifolia HOM05D000225 ORTHO05D002520 2.4e-18 96.7 206 31.6
Potri.008G187500 Populus trichocarpa HOM05D000225 ORTHO05D002520 1.3e-16 90.9 64 68.8
Ca_04581_v3 Cicer arietinum L. HOM05D000225 ORTHO05D002520 2.2e-16 90.1 100 42.0
Haze_08781 Corylus avellana HOM05D000225 ORTHO05D002520 1.2e-14 84.3 155 34.8
Sabra15G0105500 Salix brachista HOM05D000805 ORTHO05D000624 2.1e-14 83.6 82 45.1
Zm00001eb342090 Zea mays HOM05D000225 ORTHO05D002520 2.1e-14 83.6 110 42.7
SEGI_19066 Sequoiadendron giganteum HOM05D000225 ORTHO05D002520 5.7e-12 75.5 196 28.1
CDE05G1507 Ceratophyllum demersum HOM05D000225 ORTHO05D002520 9.8e-12 74.7 205 28.3
Cfa012229 Carpinus fangiana HOM05D065004 ORTHO05D002520 4.9e-11 72.4 75 49.3
Nn8g39069 Nelumbo nucifera HOM05D000225 ORTHO05D002520 8.3e-11 71.6 219 27.4
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 1.4e-10 70.9 65 55.4
Nn6g35326 Nelumbo nucifera HOM05D000225 ORTHO05D002520 3.1e-10 69.7 204 27.5
MBI04_g37499_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 1.2e-09 67.8 202 26.2
Aqoxy7G03979 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 2.7e-09 66.6 190 28.9
SGA_v2.0_scaffold66G22526 Striga asiatica HOM05D000225 ORTHO05D002520 1.3e-08 64.3 200 26.5
SalBow2G2057 Salvia bowleyana HOM05D000225 ORTHO05D002520 2.3e-08 63.5 203 26.6
Lsat_1_v5_gn_4_98620 Lactuca sativa HOM05D000225 ORTHO05D002520 8.6e-08 61.6 218 25.7
EL10Ac9g21192 Beta vulgaris HOM05D000225 ORTHO05D002520 1.9e-07 60.5 231 25.1
TAR383G0597 Trochodendron aralioides HOM05D000225 ORTHO05D002520 1.9e-07 60.5 222 24.3
Cc00_g21990 Coffea canephora HOM05D000302 ORTHO05D000334 4.3e-07 59.3 56 50.0
Lsat_1_v5_gn_1_27401 Lactuca sativa HOM05D000225 ORTHO05D009781 5.6e-07 58.9 182 26.4
SGA_v2.0_scaffold101G29773 Striga asiatica HOM05D000225 ORTHO05D003554 7.3e-07 58.5 126 34.9
CiPaw.06G029500 Carya illinoinensis HOM05D001808 ORTHO05D001747 1.6e-06 57.4 230 25.2
Thhalv10007751m.g Eutrema salsugineum HOM05D001808 ORTHO05D001747 1.6e-06 57.4 227 24.7
HanXRQChr02g0032861 Helianthus annuus HOM05D000225 ORTHO05D009781 2.1e-06 57.0 198 22.7
Phvul.007G280200 Phaseolus vulgaris HOM05D000225 ORTHO05D003554 2.8e-06 56.6 208 26.0
Sed0011487 Sechium edule HOM05D001808 ORTHO05D001747 3.6e-06 56.2 216 24.5
CiPaw.06G029400 Carya illinoinensis HOM05D001808 ORTHO05D001747 6.1e-06 55.5 230 23.9
CDE05G0616 Ceratophyllum demersum HOM05D000225 ORTHO05D002520 6.1e-06 55.5 160 28.8
Aa31LG7G5840 Aethionema arabicum HOM05D001808 ORTHO05D001747 8.0e-06 55.1 222 24.8
ClCG08G005610 Citrullus lanatus HOM05D001808 ORTHO05D001747 8.0e-06 55.1 187 26.2


User provided reference genes

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