Gene: FAN07G1090

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN07G1090
Transcript Identifier FAN07G1090.1
Gene Type Coding gene
Location Fvb4-4 : 5653939-5661317 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000740
#Genes/#Species 788/100
Phylogenetic origin

ID ORTHO05D002520
#Genes/#Species 282/94
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id augustus_masked-Fvb4-4-processed-gene-56.8.v1.0.a1
pacid 50544590

Descriptions

Short descriptions
Ortholog descriptions

Description K04733//K12393 - interleukin-1 receptor-associated kinase 4 (IRAK4) // AP-1 complex subunit mu (AP1M)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006468	IEA	InterPro	protein phosphorylation
GO:0006886	IEA	InterPro	intracellular protein transport
GO:0016192	IEA	InterPro	vesicle-mediated transport
GO:0007034	ISO	PLAZA Integrative Orthology	vacuolar transport	AT1G60780
GO:0006892	ISO	PLAZA Integrative Orthology	post-Golgi vesicle-mediated transport	AT1G60780
GO:0035653	ISO	PLAZA Integrative Orthology	clathrin-coated vesicle cargo loading, AP-1-mediated	AT1G60780

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004672	IEA	InterPro	protein kinase activity
GO:0005524	IEA	InterPro	ATP binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030131	IEA	InterPro	clathrin adaptor complex
GO:0005802	ISO	PLAZA Integrative Orthology	trans-Golgi network	AT1G60780
GO:0030121	ISO	PLAZA Integrative Orthology	AP-1 adaptor complex	AT1G60780
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G60780
GO:0012510	ISO	PLAZA Integrative Orthology	trans-Golgi network transport vesicle membrane	AT1G60780

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011012	Longin-like domain superfamily
IPR036779	LysM domain superfamily
IPR000719	Protein kinase domain
IPR022775	AP complex, mu/sigma subunit
IPR036168	AP-2 complex subunit mu, C-terminal superfamily
IPR011009	Protein kinase-like domain superfamily
IPR001392	Clathrin adaptor, mu subunit
IPR028565	Mu homology domain

Mapman id	Description
18.4.1.21	Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LysM)
22.3.1.2.3	Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.medium subunit mu (AP1M)