Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 2.2e-45 185.3 93 100.0
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 3.2e-36 154.8 93 82.8
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 9.2e-36 153.3 94 83.0
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 1.6e-35 152.5 93 82.8
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 2.7e-35 151.8 93 82.8
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 4.6e-35 151.0 93 81.7
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 4.6e-35 151.0 92 81.5
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 4.6e-35 151.0 92 81.5
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 4.6e-35 151.0 93 79.6
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 4.6e-35 151.0 93 79.6
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 6.0e-35 150.6 92 80.4
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 6.0e-35 150.6 92 80.4
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 6.0e-35 150.6 92 80.4
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 7.8e-35 150.2 92 82.6
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 7.8e-35 150.2 92 82.6
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 7.8e-35 150.2 93 81.7
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 2.3e-34 148.7 95 81.1
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.3e-34 148.7 93 79.6
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 3.9e-34 147.9 91 76.9
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 5.0e-34 147.5 94 78.7
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 5.0e-34 147.5 94 78.7
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 5.0e-34 147.5 94 78.7
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 5.0e-34 147.5 95 77.9
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 5.0e-34 147.5 95 78.9
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 5.0e-34 147.5 93 80.6
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 6.6e-34 147.1 93 80.6
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 6.6e-34 147.1 93 81.7
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 6.6e-34 147.1 91 81.3
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 6.6e-34 147.1 92 78.3
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 8.6e-34 146.7 94 76.6
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 8.6e-34 146.7 93 81.7
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 1.1e-33 146.4 93 79.6
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 1.1e-33 146.4 94 78.7
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 1.1e-33 146.4 94 78.7
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.5e-33 146.0 93 78.5
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 1.5e-33 146.0 94 79.8
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.5e-33 146.0 93 80.6
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.5e-33 146.0 93 78.5
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.9e-33 145.6 93 78.5
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.9e-33 145.6 94 77.7
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 1.9e-33 145.6 93 76.3
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.9e-33 145.6 91 75.8
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.9e-33 145.6 94 76.6
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.5e-33 145.2 91 79.1
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 4.3e-33 144.4 94 76.6
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 4.3e-33 144.4 94 76.6
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 4.3e-33 144.4 93 76.3
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 4.3e-33 144.4 93 74.2
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 4.3e-33 144.4 94 76.6
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 5.6e-33 144.1 93 77.4
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 5.6e-33 144.1 93 78.5
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 5.6e-33 144.1 93 77.4
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 7.3e-33 143.7 93 79.6
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 7.3e-33 143.7 93 79.6
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 7.3e-33 143.7 93 79.6
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.3e-33 143.7 93 75.3
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.3e-33 143.7 93 75.3
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 7.3e-33 143.7 93 80.6
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 9.5e-33 143.3 92 75.0
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 9.5e-33 143.3 93 73.1
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 1.2e-32 142.9 94 77.7
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 1.2e-32 142.9 94 76.6
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 1.2e-32 142.9 93 73.1
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.2e-32 142.9 94 75.5
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 1.6e-32 142.5 93 75.3
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 1.6e-32 142.5 93 75.3
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 2.1e-32 142.1 94 78.7
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 2.1e-32 142.1 92 77.2
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 2.1e-32 142.1 94 75.5
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 2.8e-32 141.7 94 78.7
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 2.8e-32 141.7 94 77.7
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 2.8e-32 141.7 95 74.7
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.8e-32 141.7 93 75.3
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 3.6e-32 141.4 93 75.3
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 3.6e-32 141.4 92 75.0
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 3.6e-32 141.4 93 77.4
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 3.6e-32 141.4 92 77.2
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 4.7e-32 141.0 91 76.9
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 6.2e-32 140.6 95 76.8
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 8.1e-32 140.2 92 72.8
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 8.1e-32 140.2 91 75.8
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 1.1e-31 139.8 84 78.6
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 1.1e-31 139.8 94 75.5
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.1e-31 139.8 93 78.5
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.4e-31 139.4 93 74.2
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.4e-31 139.4 94 75.5
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.4e-31 139.4 79 82.3
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.4e-31 139.4 93 77.4
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.8e-31 139.0 93 75.3
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 2.3e-31 138.7 92 72.8
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 2.3e-31 138.7 91 73.6
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 2.3e-31 138.7 94 75.5
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 3.1e-31 138.3 92 73.9
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 3.1e-31 138.3 92 69.6
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 3.1e-31 138.3 92 70.7
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.1e-31 138.3 92 72.8
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 3.1e-31 138.3 93 74.2
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 4.0e-31 137.9 94 75.5
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 5.2e-31 137.5 93 73.1
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 5.2e-31 137.5 93 72.0
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 5.2e-31 137.5 92 69.6
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 6.8e-31 137.1 93 73.1
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 6.8e-31 137.1 94 76.6
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 8.9e-31 136.7 93 73.1
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 1.5e-30 136.0 92 72.8
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 1.5e-30 136.0 92 69.6
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.5e-30 136.0 91 72.5
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.0e-30 135.6 93 74.2
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.6e-30 135.2 93 73.1
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 2.6e-30 135.2 93 72.0
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 3.4e-30 134.8 93 74.2
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 7.5e-30 133.7 80 80.0
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 9.8e-30 133.3 93 72.0
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 9.8e-30 133.3 93 68.8
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 1.3e-29 132.9 92 71.7
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.7e-29 132.5 91 72.5
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 2.2e-29 132.1 81 81.5
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 2.9e-29 131.7 93 71.0
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 3.7e-29 131.3 91 70.3
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 3.7e-29 131.3 93 69.9
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 3.7e-29 131.3 94 72.3
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 3.7e-29 131.3 93 63.4
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 4.9e-29 131.0 93 72.0
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 6.4e-29 130.6 93 72.0
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 8.3e-29 130.2 93 68.8
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 1.1e-28 129.8 93 69.9
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.1e-28 129.8 89 70.8
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 1.4e-28 129.4 93 69.9
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 3.2e-28 128.3 93 67.7
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 3.2e-28 128.3 93 67.7
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 4.1e-28 127.9 79 73.4
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 1.2e-27 126.3 94 64.9
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 2.1e-27 125.6 93 67.7
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.7e-27 125.2 92 66.3
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 6.0e-27 124.0 91 62.6
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 1.7e-26 122.5 93 66.7
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 1.7e-26 122.5 93 66.7
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 3.9e-26 121.3 93 67.7
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 3.9e-26 121.3 91 63.7
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 5.1e-26 120.9 80 68.8
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 5.1e-26 120.9 92 64.1
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 6.6e-26 120.6 91 63.7
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 6.6e-26 120.6 91 64.8
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 1.5e-25 119.4 82 75.6
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 3.3e-25 118.2 94 61.7
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 5.6e-25 117.5 94 60.6
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 7.3e-25 117.1 79 74.7
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 1.6e-24 115.9 82 69.5
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 1.6e-24 115.9 95 63.2
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 2.1e-24 115.5 91 62.6
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 2.8e-24 115.2 84 72.6
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 2.8e-24 115.2 96 62.5
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 8.1e-24 113.6 95 62.1
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 1.2e-22 109.8 81 66.7
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 5.8e-22 107.5 72 73.6
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 9.9e-22 106.7 81 65.4
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.2e-21 105.5 86 58.1
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.1e-20 101.3 92 55.4
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 7.1e-20 100.5 65 73.8
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 8.6e-18 93.6 92 52.2
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 7.3e-17 90.5 92 51.1
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 9.6e-17 90.1 61 68.9
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 1.2e-14 83.2 73 54.8
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.2e-14 83.2 52 78.8
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 1.2e-14 83.2 52 78.8
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 3.4e-14 81.6 91 41.8
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 4.9e-13 77.8 73 45.2
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.2e-12 75.1 73 50.7
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 6.0e-11 70.9 71 42.3
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 1.5e-09 66.2 50 62.0
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.9e-09 65.9 73 38.4
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.4e-07 58.9 69 39.1
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 4.4e-06 54.7 69 37.7


User provided reference genes

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