Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G002600 Manihot esculenta HOM05D015295 ORTHO05D009969 1.0e-79 300.1 159 100.0
Manes.12G002901 Manihot esculenta HOM05D015295 ORTHO05D004325 4.1e-76 288.1 159 92.5
Manes.12G002900 Manihot esculenta HOM05D015295 ORTHO05D009969 2.0e-75 285.8 160 96.2
Sabra08G0013600 Salix brachista HOM05D015295 ORTHO05D009969 1.7e-18 96.7 126 42.1
Potri.008G020300 Populus trichocarpa HOM05D015295 ORTHO05D009969 2.3e-18 96.3 138 38.4
Sabra10G0187100 Salix brachista HOM05D015295 ORTHO05D009969 6.6e-18 94.7 129 41.1
Potri.010G238900 Populus trichocarpa HOM05D015295 ORTHO05D009969 5.6e-17 91.7 135 38.5
Cpa.g.sc365.3 Carica papaya HOM05D006887 ORTHO05D009969 2.0e-14 83.2 137 37.2
TAR365G0201 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.3e-13 80.5 134 38.8
Atru.chr6.1689 Acer truncatum HOM05D006887 ORTHO05D009969 1.9e-12 76.6 147 35.4
Haze_14940 Corylus avellana HOM05D006887 ORTHO05D009969 3.2e-12 75.9 156 37.2
Cfa007171 Carpinus fangiana HOM05D006887 ORTHO05D009969 1.2e-11 73.9 156 35.3
Potri.004G222200 Populus trichocarpa HOM05D006887 ORTHO05D009969 1.6e-11 73.6 132 33.3
Sabra01G0168300 Salix brachista HOM05D006887 ORTHO05D004325 1.6e-11 73.6 141 31.2
CARHR094030 Cardamine hirsuta HOM05D006887 ORTHO05D004325 1.0e-10 70.9 135 34.1
FAN04G1442 Fragaria x ananassa HOM05D016120 ORTHO05D013324 2.3e-10 69.7 128 35.2
Lalb_Chr23g0265491 Lupinus albus HOM05D000307 ORTHO05D000166 3.9e-10 68.9 137 32.8
MBI16_g19061_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 3.9e-10 68.9 136 31.6
MBI10_g35440_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 5.1e-10 68.6 137 35.0
MBI16_g16368_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 5.1e-10 68.6 141 33.3
Sabra10G0139000 Salix brachista HOM05D001295 ORTHO05D050580 5.1e-10 68.6 129 33.3
BcaC09g48822 Brassica carinata HOM05D006887 ORTHO05D004325 6.6e-10 68.2 143 32.9
C01p45590 Brassica napus HOM05D006887 ORTHO05D004325 6.6e-10 68.2 143 32.9
BolC1t04520H Brassica oleracea HOM05D006887 ORTHO05D004325 6.6e-10 68.2 143 32.9
Haze_01459 Corylus avellana HOM05D006887 ORTHO05D009969 6.6e-10 68.2 141 33.3
MBI10_g26051_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 6.6e-10 68.2 137 34.3
MBI16_g19060_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.6e-10 68.2 136 31.6
Manes.10G129900 Manihot esculenta HOM05D006887 ORTHO05D004325 6.6e-10 68.2 133 36.1
MBI09_g18620_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 8.7e-10 67.8 144 29.2
BraA01t03660Z Brassica rapa HOM05D006887 ORTHO05D004325 1.1e-09 67.4 143 33.6
FAN08G0332 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.1e-09 67.4 133 35.3
ATR0626G033 Amborella trichopoda HOM05D000307 ORTHO05D000166 1.5e-09 67.0 134 32.8
BcaB04g18996 Brassica carinata HOM05D006887 ORTHO05D004325 1.5e-09 67.0 143 32.9
Prupe.7G031800 Prunus persica HOM05D000307 ORTHO05D000166 1.5e-09 67.0 178 29.2
Cfa015195 Carpinus fangiana HOM05D006887 ORTHO05D009969 1.9e-09 66.6 132 35.6
Sp3g16720 Schrenkiella parvula HOM05D006887 ORTHO05D004325 1.9e-09 66.6 141 29.8
BcaB04g20759 Brassica carinata HOM05D006887 ORTHO05D004325 2.5e-09 66.2 163 30.7
MBI10_g35438_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 2.5e-09 66.2 135 30.4
A01p35810 Brassica napus HOM05D006887 ORTHO05D004325 3.3e-09 65.9 143 33.6
FAN13G0405 Fragaria x ananassa HOM05D016120 ORTHO05D013324 3.3e-09 65.9 141 34.8
MBI16_g16371_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 3.3e-09 65.9 136 30.9
Potri.015G077800 Populus trichocarpa HOM05D006887 ORTHO05D009969 3.3e-09 65.9 144 32.6
Prupe.7G032000 Prunus persica HOM05D000307 ORTHO05D000166 3.3e-09 65.9 178 28.7
FAN18G0925 Fragaria x ananassa HOM05D016120 ORTHO05D013324 4.3e-09 65.5 133 34.6
ATR0605G195 Amborella trichopoda HOM05D000307 ORTHO05D000166 5.6e-09 65.1 141 30.5
FvH4_5g27070 Fragaria vesca HOM05D016120 ORTHO05D013324 9.6e-09 64.3 141 34.8
Prupe.7G030800 Prunus persica HOM05D000307 ORTHO05D000166 9.6e-09 64.3 172 30.2
BcaB06g25916 Brassica carinata HOM05D006887 ORTHO05D004325 1.6e-08 63.5 151 29.8
BcaC05g28586 Brassica carinata HOM05D006887 ORTHO05D004325 1.6e-08 63.5 145 29.0
BolC5t33421H Brassica oleracea HOM05D006887 ORTHO05D004325 1.6e-08 63.5 145 29.0
arahy.Tifrunner.gnm1.ann1.P24S13 Arachis hypogaea HOM05D000307 ORTHO05D000166 2.1e-08 63.2 142 34.5
Potri.010G181300 Populus trichocarpa HOM05D015295 ORTHO05D050580 2.1e-08 63.2 129 31.8
Prupe.7G030200 Prunus persica HOM05D000307 ORTHO05D000166 2.1e-08 63.2 116 35.3
Sabra15G0102400 Salix brachista HOM05D006887 ORTHO05D009969 2.1e-08 63.2 139 31.7
SEGI_05719 Sequoiadendron giganteum HOM05D066287 ORTHO05D000166 2.1e-08 63.2 140 28.6
Lalb_Chr05g0223381 Lupinus albus HOM05D000307 ORTHO05D000166 2.8e-08 62.8 139 32.4
FAN27G3405 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.8e-08 62.0 142 32.4
THA.LOC104801507 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.8e-08 62.0 58 48.3
CSS0012311 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 6.2e-08 61.6 152 29.6
MBI10_g26049_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 6.2e-08 61.6 124 34.7
Dinv15101 Davidia involucrata HOM05D000307 ORTHO05D000166 8.1e-08 61.2 141 32.6
Duzib264G0859 Durio zibethinus HOM05D000307 ORTHO05D000166 8.1e-08 61.2 139 30.9
FvH4_2g27520 Fragaria vesca HOM05D000307 ORTHO05D000166 8.1e-08 61.2 162 30.2
FAN15G0593 Fragaria x ananassa HOM05D000307 ORTHO05D000166 8.1e-08 61.2 162 30.2
FAN24G2406 Fragaria x ananassa HOM05D000307 ORTHO05D000166 8.1e-08 61.2 162 30.2
Gohir.D11G185000 Gossypium hirsutum HOM05D000307 ORTHO05D000166 8.1e-08 61.2 140 30.7
Gorai.007G196600 Gossypium raimondii HOM05D000307 ORTHO05D000166 8.1e-08 61.2 140 30.7
AL3G31960 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.1e-07 60.8 133 32.3
Cpa.g.sc25.11 Carica papaya HOM05D063200 ORTHO05D009969 1.4e-07 60.5 142 31.7
Haze_14188 Corylus avellana HOM05D000307 ORTHO05D000166 1.4e-07 60.5 144 29.2
Dinv29104 Davidia involucrata HOM05D000307 ORTHO05D000166 1.8e-07 60.1 143 28.7
Thhalv10005313m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.8e-07 60.1 140 29.3
FAN12G1561 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.8e-07 60.1 163 33.7
MBI07_g09577_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 1.8e-07 60.1 140 30.7
Actinidia09597 Actinidia chinensis HOM05D002537 ORTHO05D002751 2.4e-07 59.7 142 28.9
CSS0000924 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 2.4e-07 59.7 152 28.9
CsaV3_2G019470 Cucumis sativus L. HOM05D000307 ORTHO05D000166 2.4e-07 59.7 140 29.3
FvH4_4g07700 Fragaria vesca HOM05D016120 ORTHO05D013324 2.4e-07 59.7 163 33.7
FAN20G0315 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.4e-07 59.7 142 31.7
FAN22G2097 Fragaria x ananassa HOM05D016120 ORTHO05D013324 2.4e-07 59.7 170 34.1
Gohir.A11G177200 Gossypium hirsutum HOM05D000307 ORTHO05D000166 2.4e-07 59.7 140 30.0
AT5G65330 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.1e-07 59.3 139 30.9
TAR625G0700 Trochodendron aralioides HOM05D000307 ORTHO05D000166 3.1e-07 59.3 151 29.1
Cfa007888 Carpinus fangiana HOM05D000307 ORTHO05D000166 4.0e-07 58.9 144 28.5
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 5.3e-07 58.5 67 41.8
Sed0006669 Sechium edule HOM05D000307 ORTHO05D000166 5.3e-07 58.5 139 28.8
Thecc.01G021900 Theobroma cacao HOM05D000307 ORTHO05D000166 5.3e-07 58.5 140 30.7
C02p64040 Brassica napus HOM05D006887 ORTHO05D004325 6.9e-07 58.2 155 28.4
BolC2t12470H Brassica oleracea HOM05D006887 ORTHO05D004325 6.9e-07 58.2 155 28.4
BraA05t21939Z Brassica rapa HOM05D006887 ORTHO05D004325 6.9e-07 58.2 149 27.5
CSS0020770 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 6.9e-07 58.2 146 28.8
CSS0028822 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 6.9e-07 58.2 148 29.1
Carub.0003s1843 Capsella rubella HOM05D006887 ORTHO05D004325 6.9e-07 58.2 134 29.1
Cpa.g.sc192.10 Carica papaya HOM05D006887 ORTHO05D004325 6.9e-07 58.2 130 32.3
MD15G1430800 Malus domestica HOM05D000307 ORTHO05D013324 6.9e-07 58.2 184 27.7
Rhsim08G0003700 Rhododendron simsii HOM05D000307 ORTHO05D000166 6.9e-07 58.2 142 30.3
AT3G18650 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 9.0e-07 57.8 142 31.7
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 9.0e-07 57.8 83 41.0
Peaxi162Scf00076g01010 Petunia axillaris HOM05D000307 ORTHO05D000166 9.0e-07 57.8 140 32.1
THA.LOC109116042 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 9.0e-07 57.8 131 32.8
TAR625G0022 Trochodendron aralioides HOM05D000307 ORTHO05D000166 9.0e-07 57.8 142 30.3
BcaC03g18328 Brassica carinata HOM05D006887 ORTHO05D004325 1.2e-06 57.4 155 28.4
Cpa.g.sc25.27 Carica papaya HOM05D063200 ORTHO05D009969 1.2e-06 57.4 142 31.0
Hma1.2p1_0038F.1_g024040 Hydrangea macrophylla HOM05D000307 ORTHO05D000166 1.2e-06 57.4 152 28.9
Aqoxy5G00368 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 1.5e-06 57.0 138 30.4
THA.LOC109116041 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 1.5e-06 57.0 131 32.8
MBI10_g35436_MAGBIO Magnolia biondii HOM05D002111 ORTHO05D002160 2.0e-06 56.6 124 33.1
Medtr2g016210 Medicago truncatula HOM05D000307 ORTHO05D000166 2.0e-06 56.6 143 25.9
Oeu048605.1 Olea europaea HOM05D041624 ORTHO05D009969 2.0e-06 56.6 98 37.8
Oeu048608.1 Olea europaea HOM05D041624 ORTHO05D009969 2.0e-06 56.6 98 37.8
RcHm_v2.0_Chr6g0296351 Rosa chinensis HOM05D000307 ORTHO05D000166 2.0e-06 56.6 136 30.1
Nitab4.5_0007355g0010 Nicotiana tabacum HOM05D000307 ORTHO05D000166 2.6e-06 56.2 153 28.8
CSS0003566 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 3.4e-06 55.8 152 28.3
CiPaw.04G087000 Carya illinoinensis HOM05D000307 ORTHO05D000166 3.4e-06 55.8 152 29.6
Dinv30482 Davidia involucrata HOM05D009853 ORTHO05D009969 3.4e-06 55.8 63 47.6
FvH4_7g04141 Fragaria vesca HOM05D017106 ORTHO05D013324 3.4e-06 55.8 68 42.6
MBI03_g17862_MAGBIO Magnolia biondii HOM05D032750 ORTHO05D000166 3.4e-06 55.8 138 28.3
SGA_v2.0_scaffold58G20582 Striga asiatica HOM05D000370 ORTHO05D000166 3.4e-06 55.8 140 29.3
ATR0626G298 Amborella trichopoda HOM05D000307 ORTHO05D000166 4.5e-06 55.5 42 61.9
CSS0019303 Camellia sinensis var. sinensis HOM05D009853 ORTHO05D009969 4.5e-06 55.5 55 40.0
CANSAT80G0747 Cannabis sativa HOM05D015295 ORTHO05D043380 4.5e-06 55.5 135 28.1
Ca_13731_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 4.5e-06 55.5 139 30.2
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 4.5e-06 55.5 82 39.0
Lj1C1007T16 Lonicera japonica HOM05D000307 ORTHO05D000166 4.5e-06 55.5 136 31.6
Oeu046900.1 Olea europaea HOM05D000307 ORTHO05D000166 4.5e-06 55.5 145 29.0
Sc03g0011100 Simmondsia chinensis HOM05D000307 ORTHO05D000166 4.5e-06 55.5 155 27.7
THA.LOC104801949 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.5e-06 55.5 79 39.2
THA.LOC104801951 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.5e-06 55.5 79 39.2
THA.LOC104804829 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.5e-06 55.5 133 32.3
THA.LOC104805962 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.5e-06 55.5 140 30.0
THA.LOC104825360 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.5e-06 55.5 79 39.2
TPR.G26403 Trifolium pratense HOM05D008089 ORTHO05D000166 4.5e-06 55.5 142 31.0
AT4G02235 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 5.8e-06 55.1 60 43.3
CSS0034462 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 5.8e-06 55.1 148 28.4
CSS0047056 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 5.8e-06 55.1 146 29.5
CiPaw.03G065100 Carya illinoinensis HOM05D000307 ORTHO05D000166 5.8e-06 55.1 142 29.6
Ciclev10030228m.g Citrus clementina HOM05D000307 ORTHO05D000166 5.8e-06 55.1 147 25.9
MD17G1250500 Malus domestica HOM05D000307 ORTHO05D000166 5.8e-06 55.1 136 30.1
TPR.G37817 Trifolium pratense HOM05D000307 ORTHO05D000166 5.8e-06 55.1 120 30.0
CSS0029060 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 7.6e-06 54.7 146 28.1
ClCG02G000370 Citrullus lanatus HOM05D000307 ORTHO05D000166 7.6e-06 54.7 139 25.9
MELO3C023227.2 Cucumis melo HOM05D000307 ORTHO05D000166 7.6e-06 54.7 140 29.3
FAN09G4481 Fragaria x ananassa HOM05D000307 ORTHO05D000166 7.6e-06 54.7 140 31.4
Lj1C1007T18 Lonicera japonica HOM05D000307 ORTHO05D000166 7.6e-06 54.7 136 30.1
Medtr7g011950 Medicago truncatula HOM05D000307 ORTHO05D000166 7.6e-06 54.7 152 23.7
Nitab4.5_0000365g0070 Nicotiana tabacum HOM05D000307 ORTHO05D000166 7.6e-06 54.7 134 29.1
Oeu061769.1 Olea europaea HOM05D000307 ORTHO05D000166 7.6e-06 54.7 145 28.3
Sopen05g008160 Solanum pennellii HOM05D013339 ORTHO05D009969 7.6e-06 54.7 138 31.2
CSS0036324 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 9.9e-06 54.3 149 28.2
QL10p050899 Quercus lobata HOM05D006887 ORTHO05D009969 9.9e-06 54.3 55 43.6
Sp5g22080 Schrenkiella parvula HOM05D007946 ORTHO05D004325 9.9e-06 54.3 39 53.8


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