Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G151302 Manihot esculenta HOM05D005293 ORTHO05D006764 5.7e-68 260.8 129 100.0
Manes.09G177500 Manihot esculenta HOM05D005293 ORTHO05D006764 7.4e-68 260.4 128 100.0
Dinv30900 Davidia involucrata HOM05D005293 ORTHO05D006764 2.1e-62 242.3 127 92.9
Sc16g0009090 Simmondsia chinensis HOM05D005293 ORTHO05D006764 7.9e-62 240.4 127 91.3
TWI56G0054 Tripterygium wilfordii HOM05D005293 ORTHO05D006764 1.8e-61 239.2 127 89.8
GSVIVG01031253001 Vitis vinifera HOM05D005293 ORTHO05D006764 1.8e-61 239.2 127 90.6
CSS0026167 Camellia sinensis var. sinensis HOM05D005293 ORTHO05D006764 2.3e-61 238.8 127 91.3
QL03p014223 Quercus lobata HOM05D005293 ORTHO05D006764 5.1e-61 237.7 127 89.8
Haze_04033 Corylus avellana HOM05D005293 ORTHO05D006764 6.7e-61 237.3 127 89.8
Atru.chr2.352 Acer truncatum HOM05D005293 ORTHO05D006764 8.8e-61 236.9 127 89.8
CSS0034972 Camellia sinensis var. sinensis HOM05D005293 ORTHO05D006764 8.8e-61 236.9 127 90.6
TAR362G0639 Trochodendron aralioides HOM05D005293 ORTHO05D006764 8.8e-61 236.9 127 89.0
Cpa.g.sc48.173 Carica papaya HOM05D005293 ORTHO05D006764 1.1e-60 236.5 127 89.8
Hma1.2p1_0008F-1.1_g005500 Hydrangea macrophylla HOM05D005293 ORTHO05D006764 1.1e-60 236.5 127 89.8
Actinidia16868 Actinidia chinensis HOM05D005293 ORTHO05D006764 1.5e-60 236.1 128 90.6
Prupe.6G311900 Prunus persica HOM05D005293 ORTHO05D006764 1.5e-60 236.1 127 89.8
AUR62000381 Chenopodium quinoa HOM05D005293 ORTHO05D006764 3.3e-60 235.0 128 86.7
Lsat_1_v5_gn_8_116220 Lactuca sativa HOM05D005293 ORTHO05D006764 3.3e-60 235.0 127 87.4
AUR62006736 Chenopodium quinoa HOM05D005293 ORTHO05D006764 5.7e-60 234.2 128 85.9
Thecc.05G324300 Theobroma cacao HOM05D005293 ORTHO05D006764 7.4e-60 233.8 127 89.0
Cfa006727 Carpinus fangiana HOM05D005293 ORTHO05D006764 9.7e-60 233.4 127 88.2
ATR0693G200 Amborella trichopoda HOM05D005293 ORTHO05D006764 2.8e-59 231.9 127 89.0
Oeu016565.1 Olea europaea HOM05D005293 ORTHO05D006764 3.7e-59 231.5 128 85.2
Duzib106G1789 Durio zibethinus HOM05D005293 ORTHO05D006764 6.3e-59 230.7 127 87.4
Lj1g0018442 Lotus japonicus HOM05D005293 ORTHO05D006764 8.2e-59 230.3 127 87.4
CiPaw.07G030400 Carya illinoinensis HOM05D005293 ORTHO05D006764 1.1e-58 229.9 127 86.6
ECA232G4555 Erigeron canadensis HOM05D005293 ORTHO05D006764 1.1e-58 229.9 127 85.8
Migut.N00939 Erythranthe guttata HOM05D005293 ORTHO05D006764 1.1e-58 229.9 127 87.4
Gohir.D13G115500 Gossypium hirsutum HOM05D005293 ORTHO05D006764 1.1e-58 229.9 127 87.4
Gorai.013G130100 Gossypium raimondii HOM05D005293 ORTHO05D006764 1.1e-58 229.9 127 87.4
Lalb_Chr04g0260421 Lupinus albus HOM05D005293 ORTHO05D006764 1.4e-58 229.6 127 89.0
THA.LOC104820617 Tarenaya hassleriana HOM05D005293 ORTHO05D006764 1.4e-58 229.6 127 86.6
EL10Ac4g09472 Beta vulgaris HOM05D005293 ORTHO05D006764 1.8e-58 229.2 128 84.4
CANSAT54G1875 Cannabis sativa HOM05D005293 ORTHO05D006764 1.8e-58 229.2 127 87.4
HanXRQChr09g0258691 Helianthus annuus HOM05D005293 ORTHO05D006764 1.8e-58 229.2 127 85.0
TPR.G1667 Trifolium pratense HOM05D005293 ORTHO05D006764 1.8e-58 229.2 127 86.6
DCAR_029342 Daucus carota HOM05D005293 ORTHO05D006764 2.4e-58 228.8 128 85.9
Psat3g012680 Pisum sativum HOM05D005293 ORTHO05D006764 2.4e-58 228.8 127 89.0
Nn3g21747 Nelumbo nucifera HOM05D005293 ORTHO05D006764 3.1e-58 228.4 127 86.6
vmacro01574 Vaccinium macrocarpon HOM05D005293 ORTHO05D006764 3.1e-58 228.4 142 81.7
Ciclev10000268m.g Citrus clementina HOM05D005293 ORTHO05D006764 4.1e-58 228.0 135 84.4
PGR031G3792 Punica granatum HOM05D005293 ORTHO05D006764 4.1e-58 228.0 127 85.0
MSTRG.27933 Avicennia marina HOM05D005293 ORTHO05D006764 5.3e-58 227.6 129 86.8
MELO3C015255.2 Cucumis melo HOM05D005293 ORTHO05D006764 1.2e-57 226.5 127 83.5
Ah.06g196020 Amaranthus hybridus HOM05D005293 ORTHO05D006764 1.5e-57 226.1 128 84.4
Eucgr.H03302 Eucalyptus grandis HOM05D005293 ORTHO05D006764 2.0e-57 225.7 127 85.8
RcHm_v2.0_Chr3g0457281 Rosa chinensis HOM05D005293 ORTHO05D006764 2.0e-57 225.7 127 85.0
arahy.Tifrunner.gnm1.ann1.KQC6RY Arachis hypogaea HOM05D005293 ORTHO05D006764 2.6e-57 225.3 127 85.0
CsaV3_1G037900 Cucumis sativus L. HOM05D005293 ORTHO05D006764 2.6e-57 225.3 127 83.5
MD12G1204700 Malus domestica HOM05D005293 ORTHO05D006764 2.6e-57 225.3 129 86.0
AL1G66250 Arabidopsis lyrata HOM05D005293 ORTHO05D006764 3.4e-57 224.9 127 84.3
Medtr7g112140 Medicago truncatula HOM05D005293 ORTHO05D006764 3.4e-57 224.9 127 87.4
Ca_09301_v3 Cicer arietinum L. HOM05D005293 ORTHO05D006764 4.5e-57 224.6 127 84.3
Gohir.A13G112600 Gossypium hirsutum HOM05D005293 ORTHO05D006764 4.5e-57 224.6 127 85.8
FvH4_6g07620 Fragaria vesca HOM05D005293 ORTHO05D006764 7.7e-57 223.8 127 84.3
Solyc01g100650.3 Solanum lycopersicum HOM05D005293 ORTHO05D006764 1.0e-56 223.4 126 86.5
BcaB07g31127 Brassica carinata HOM05D005293 ORTHO05D006764 1.3e-56 223.0 127 84.3
Hund21866 Selenicereus undatus HOM05D005293 ORTHO05D006764 1.7e-56 222.6 140 79.3
Thhalv10023228m.g Eutrema salsugineum HOM05D005293 ORTHO05D006764 2.2e-56 222.2 127 83.5
AT1G56500 Arabidopsis thaliana HOM05D005293 ORTHO05D006764 2.9e-56 221.9 127 83.5
CARHR055040 Cardamine hirsuta HOM05D005293 ORTHO05D006764 2.9e-56 221.9 127 83.5
Glyma.19G228100 Glycine max HOM05D005293 ORTHO05D006764 2.9e-56 221.9 127 83.5
Sp2g06270 Schrenkiella parvula HOM05D005293 ORTHO05D006764 2.9e-56 221.9 127 82.7
Sed0019289 Sechium edule HOM05D005293 ORTHO05D006764 5.0e-56 221.1 127 81.9
BcaC04g22064 Brassica carinata HOM05D005293 ORTHO05D006764 6.5e-56 220.7 127 82.7
MBI19_g03259_MAGBIO Magnolia biondii HOM05D005293 ORTHO05D006764 6.5e-56 220.7 137 80.3
Lj5C327G4 Lonicera japonica HOM05D005293 ORTHO05D006764 1.9e-55 219.2 132 84.8
PSO782G5414 Papaver somniferum HOM05D005293 ORTHO05D006764 1.9e-55 219.2 128 81.2
Phvul.001G224700 Phaseolus vulgaris HOM05D005293 ORTHO05D006764 1.9e-55 219.2 127 82.7
PSO478G4822 Papaver somniferum HOM05D005293 ORTHO05D006764 4.2e-55 218.0 128 81.2
Sopen01g044170 Solanum pennellii HOM05D005293 ORTHO05D006764 4.2e-55 218.0 126 84.9
SGA_v2.0_scaffold37G14600 Striga asiatica HOM05D005293 ORTHO05D006764 4.2e-55 218.0 127 81.9
A09p19050 Brassica napus HOM05D005293 ORTHO05D006764 9.4e-55 216.9 133 80.5
Potri.013G007800 Populus trichocarpa HOM05D005293 ORTHO05D006764 1.2e-54 216.5 127 84.3
FAN09G2780 Fragaria x ananassa HOM05D005293 ORTHO05D006764 2.7e-54 215.3 139 77.7
FAN14G3496 Fragaria x ananassa HOM05D005293 ORTHO05D006764 3.6e-54 214.9 139 77.0
Aa31LG2G11430 Aethionema arabicum HOM05D005293 ORTHO05D006764 4.7e-54 214.5 149 73.2
HPP92_013515 Vanilla planifolia HOM05D005293 ORTHO05D006764 4.7e-54 214.5 127 79.5
BraA09t37523Z Brassica rapa HOM05D005293 ORTHO05D006764 7.9e-54 213.8 143 74.8
Carub.0002s0755 Capsella rubella HOM05D005293 ORTHO05D006764 7.9e-54 213.8 127 80.3
SEGI_20624 Sequoiadendron giganteum HOM05D005293 ORTHO05D006764 1.0e-53 213.4 127 80.3
Aqoxy7G02580 Aquilegia oxysepala HOM05D005293 ORTHO05D006764 2.3e-53 212.2 126 82.5
BolC9t55314H Brassica oleracea HOM05D005293 ORTHO05D006764 2.3e-53 212.2 144 73.6
FAN05G3958 Fragaria x ananassa HOM05D005293 ORTHO05D006764 2.3e-53 212.2 139 77.0
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 3.0e-53 211.8 127 80.3
Zm00001eb014960 Zea mays HOM05D005293 ORTHO05D006764 3.0e-53 211.8 127 78.7
Nitab4.5_0001338g0090 Nicotiana tabacum HOM05D005293 ORTHO05D006764 5.2e-53 211.1 134 80.6
C09p23880 Brassica napus HOM05D005293 ORTHO05D006764 1.1e-52 209.9 144 72.9
Sabra13G0006700 Salix brachista HOM05D005293 ORTHO05D006764 1.7e-48 196.1 127 78.0
AagrBONN_evm.TU.Sc2ySwM_228.2939 Anthoceros agrestis HOM05D005293 ORTHO05D006764 2.5e-47 192.2 127 70.9
ClCG03G017750 Citrullus lanatus HOM05D005293 ORTHO05D006764 2.1e-46 189.1 105 83.8
Peaxi162Scf01061g00134 Petunia axillaris HOM05D005293 ORTHO05D006764 4.7e-46 188.0 105 85.7
Mapoly0010s0206 Marchantia polymorpha HOM05D005293 ORTHO05D006764 2.3e-45 185.7 127 66.9
Pp3c22_14790 Physcomitrium patens HOM05D005293 ORTHO05D006764 2.2e-43 179.1 127 67.7
CBR_g26293 Chara braunii HOM05D005293 ORTHO05D006764 3.1e-42 175.3 127 67.7
Nitab4.5_0004525g0070 Nicotiana tabacum HOM05D005293 ORTHO05D006764 3.1e-42 175.3 103 82.5
FAN02G4229 Fragaria x ananassa HOM05D005293 ORTHO05D006764 2.7e-41 172.2 116 74.1
SMO358G0750 Selaginella moellendorffii HOM05D005293 ORTHO05D006764 2.7e-41 172.2 127 63.8
Ah.06g196090 Amaranthus hybridus HOM05D005293 ORTHO05D006764 2.2e-40 169.1 115 73.9
Manes.03G089519 Manihot esculenta HOM05D003429 ORTHO05D003873 1.1e-39 166.8 79 98.7
Manes.13G093344 Manihot esculenta HOM05D003429 ORTHO05D003873 1.1e-39 166.8 79 98.7
COL.COLO4_05541 Corchorus olitorius HOM05D005293 ORTHO05D006764 1.3e-35 153.3 151 56.3
Cc00_g28630 Coffea canephora HOM05D005293 ORTHO05D006764 2.8e-35 152.1 84 88.1
CAN.G1076.25 Capsicum annuum HOM05D005293 ORTHO05D006764 1.2e-33 146.7 84 85.7
Cre13.g586050 Chlamydomonas reinhardtii HOM05D005293 ORTHO05D006764 1.0e-32 143.7 128 57.8
Zm00001eb139440 Zea mays HOM05D005293 ORTHO05D006764 2.0e-25 119.4 78 76.9
unitig_746.g26883 Utricularia gibba HOM05D005293 ORTHO05D006764 5.9e-25 117.9 69 79.7
Rhsim07G0131600 Rhododendron simsii HOM05D005293 ORTHO05D006764 4.4e-20 101.7 130 49.2
RcHm_v2.0_Chr4g0393221 Rosa chinensis HOM05D005293 ORTHO05D006764 1.4e-18 96.7 52 82.7
Ca_30515_v3 Cicer arietinum L. HOM05D005293 ORTHO05D006764 1.2e-17 93.6 52 88.5
CARHR049350 Cardamine hirsuta HOM05D005293 ORTHO05D006764 1.9e-07 59.7 56 60.7


User provided reference genes

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