Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 7.2e-245 850.1 424 100.0
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 1.9e-152 543.1 416 64.9
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 3.2e-152 542.3 429 66.7
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 3.5e-151 538.9 411 65.7
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 4.1e-147 525.4 411 65.5
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 6.5e-145 518.1 427 63.9
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 2.1e-143 513.1 409 62.1
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 1.9e-141 506.5 442 62.9
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.5e-141 506.1 403 62.8
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 4.3e-141 505.4 403 63.3
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 7.4e-141 504.6 476 55.7
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 9.7e-141 504.2 408 62.3
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.7e-140 503.4 408 62.5
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 2.8e-140 502.7 454 57.7
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 6.3e-140 501.5 408 62.0
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 2.4e-139 499.6 408 62.0
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 5.0e-137 491.9 406 62.1
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 8.5e-137 491.1 398 62.8
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 5.5e-136 488.4 425 60.5
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 2.6e-133 479.6 404 61.6
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 5.7e-133 478.4 420 60.5
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 1.3e-132 477.2 423 59.1
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 2.2e-132 476.5 410 60.5
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 3.7e-132 475.7 428 57.7
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 8.2e-132 474.6 438 58.2
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 1.1e-131 474.2 404 61.4
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 3.4e-130 469.2 386 61.7
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 1.9e-128 463.4 410 58.5
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 9.4e-128 461.1 406 59.1
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 3.6e-127 459.1 404 58.9
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 1.4e-126 457.2 430 56.7
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 1.8e-126 456.8 439 55.8
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 5.2e-126 455.3 411 59.1
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 8.8e-126 454.5 439 55.8
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 7.4e-125 451.4 411 58.6
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 2.8e-124 449.5 381 59.1
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 2.8e-124 449.5 407 55.3
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 8.2e-124 448.0 411 58.4
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 2.4e-123 446.4 508 51.6
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 9.1e-123 444.5 416 56.0
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 2.0e-122 443.4 405 58.5
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.0e-122 443.4 420 56.9
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 2.0e-122 443.4 412 54.9
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 1.7e-121 440.3 408 54.2
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 3.8e-121 439.1 413 57.6
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 5.0e-121 438.7 403 56.6
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 6.5e-121 438.3 459 54.0
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 1.5e-120 437.2 401 57.1
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 3.2e-120 436.0 406 54.7
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 1.6e-119 433.7 402 55.7
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 3.6e-119 432.6 417 55.4
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 8.0e-119 431.4 404 54.7
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 3.0e-118 429.5 425 55.8
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 6.7e-118 428.3 402 55.0
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 2.8e-116 422.9 413 56.2
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 6.3e-116 421.8 430 54.7
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 1.1e-115 421.0 437 52.4
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.1e-115 421.0 297 69.0
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 1.4e-115 420.6 402 56.0
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 2.5e-112 409.8 404 55.0
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 1.0e-110 404.4 427 51.8
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 1.4e-110 404.1 428 49.1
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 4.0e-110 402.5 428 51.4
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 4.0e-110 402.5 404 53.7
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 6.8e-110 401.7 405 52.3
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 8.8e-110 401.4 430 51.9
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 1.5e-109 400.6 404 54.0
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 1.5e-109 400.6 405 53.8
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.7e-108 397.1 397 54.9
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 1.4e-107 394.0 420 52.1
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 1.4e-107 394.0 420 52.4
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 1.4e-107 394.0 420 52.4
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 1.4e-107 394.0 420 52.1
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 3.1e-107 392.9 307 62.9
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 3.1e-107 392.9 401 54.6
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 7.0e-107 391.7 284 67.6
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 7.0e-107 391.7 438 51.4
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 1.2e-106 391.0 423 49.4
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 2.7e-106 389.8 391 53.7
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 3.5e-106 389.4 406 52.7
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 3.5e-106 389.4 435 51.5
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 3.5e-106 389.4 407 52.8
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 4.5e-106 389.0 405 51.9
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 1.3e-105 387.5 419 50.1
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 1.3e-105 387.5 402 54.2
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 2.9e-105 386.3 416 49.8
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 9.5e-104 381.3 400 53.5
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 1.0e-102 377.9 398 52.0
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 1.8e-102 377.1 422 49.5
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 3.0e-102 376.3 417 51.1
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 8.9e-102 374.8 319 59.2
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 2.6e-101 373.2 406 49.3
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 1.7e-100 370.5 431 48.7
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 2.8e-100 369.8 424 49.8
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 2.8e-100 369.8 432 49.8
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 2.4e-99 366.7 424 47.9
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 2.3e-97 360.1 444 48.0
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 3.8e-97 359.4 421 48.7
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 3.3e-96 356.3 424 46.7
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 1.6e-95 354.0 420 47.9
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 8.3e-92 341.7 424 47.9
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.4e-91 340.1 291 59.5
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 2.4e-91 340.1 524 40.3
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 1.0e-89 334.7 422 46.9
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 3.6e-87 326.2 416 45.2
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.1e-86 324.7 292 58.2
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 1.5e-85 320.9 275 58.5
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 1.7e-84 317.4 275 58.2
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 1.7e-84 317.4 275 58.2
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 8.3e-84 315.1 434 44.0
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 1.9e-83 313.9 298 54.4
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 2.4e-83 313.5 276 58.3
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 3.2e-83 313.2 276 58.3
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 1.1e-70 271.6 343 46.4
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 3.1e-70 270.0 316 49.1
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 9.9e-69 265.0 258 52.3
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 1.9e-67 260.8 334 47.0
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 1.9e-64 250.8 288 47.2
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 1.9e-64 250.8 318 44.3
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 5.3e-62 242.7 292 45.5
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 6.9e-62 242.3 167 68.9
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 4.6e-58 229.6 188 60.1
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 3.0e-57 226.9 292 41.4
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 1.2e-53 214.9 289 42.9
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 1.5e-53 214.5 256 47.3
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 1.4e-51 208.0 250 49.2
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 9.3e-51 205.3 282 41.1
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.5e-45 188.0 127 70.1
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 6.4e-44 182.6 276 41.3
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 2.5e-43 180.6 139 62.6
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 9.3e-43 178.7 147 61.2
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 1.6e-42 177.9 269 40.1
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 6.7e-41 172.6 243 39.5
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.2e-37 161.8 109 68.8
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 2.2e-36 157.5 208 46.2
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 5.5e-35 152.9 81 93.8
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.5e-32 144.1 99 67.7
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 3.3e-32 143.7 99 70.7
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 2.2e-31 141.0 224 41.1
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 1.8e-30 137.9 181 41.4
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 3.1e-30 137.1 181 41.4
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 1.0e-28 132.1 107 58.9
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 2.9e-28 130.6 176 44.3
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 7.9e-26 122.5 69 79.7
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 2.2e-23 114.4 266 31.6
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 5.3e-22 109.8 104 51.0
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 7.7e-21 105.9 62 77.4
GSVIVG01027698001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.9e-19 101.3 63 66.7
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 3.2e-19 100.5 314 27.1
GSVIVG01018194001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.6e-18 98.2 68 60.3
Actinidia15864 Actinidia chinensis HOM05D004413 ORTHO05D005199 4.7e-18 96.7 51 78.4
TWI73G0758 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 2.3e-17 94.4 96 55.2
Atru.chr1.1384 Acer truncatum HOM05D004413 ORTHO05D005199 1.5e-13 81.6 84 54.8
GSVIVG01026105001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.6e-13 80.9 55 65.5
GSVIVG01027714001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.6e-13 80.9 171 36.8
GSVIVG01012403001 Vitis vinifera HOM05D004413 ORTHO05D005199 5.9e-13 79.7 55 63.6
GSVIVG01027696001 Vitis vinifera HOM05D004413 ORTHO05D005199 7.7e-13 79.3 58 58.6
Nitab4.5_0003792g0060 Nicotiana tabacum HOM05D004413 ORTHO05D005199 4.7e-10 70.1 96 43.8
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 8.0e-10 69.3 46 65.2
GSVIVG01037069001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.1e-08 65.5 54 59.3
Lju170C28T1 Lonicera japonica HOM05D004413 ORTHO05D005199 1.3e-07 62.0 81 50.6
Sc24g0000530 Simmondsia chinensis HOM05D004413 ORTHO05D005199 2.8e-07 60.8 138 34.1


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