Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 5.7e-89 330.9 165 100.0
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 5.4e-71 271.2 136 99.3
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 1.9e-60 236.1 117 100.0
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 3.1e-58 228.8 133 84.2
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.5e-57 226.5 136 81.6
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 5.8e-57 224.6 136 80.1
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 8.3e-56 220.7 133 79.7
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 1.4e-55 219.9 133 80.5
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.9e-55 219.5 133 81.2
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 5.4e-55 218.0 133 79.7
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 9.2e-55 217.2 133 80.5
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 2.0e-54 216.1 133 78.9
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 2.7e-54 215.7 133 81.2
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 4.6e-54 214.9 134 79.9
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 6.0e-54 214.5 133 78.9
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.0e-53 213.8 134 79.1
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.3e-53 213.4 148 71.6
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.3e-53 213.4 133 81.2
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.7e-53 213.0 133 80.5
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 3.0e-53 212.2 133 76.7
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.0e-53 212.2 136 77.2
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.0e-53 212.2 132 78.8
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 3.9e-53 211.8 133 78.9
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 3.9e-53 211.8 133 78.9
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 3.9e-53 211.8 136 77.2
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.9e-53 211.8 136 77.2
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 3.9e-53 211.8 134 79.1
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 3.9e-53 211.8 134 81.3
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 5.0e-53 211.5 133 82.0
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 5.0e-53 211.5 133 76.7
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 6.6e-53 211.1 137 78.8
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 6.6e-53 211.1 137 78.8
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 6.6e-53 211.1 136 76.5
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 1.1e-52 210.3 152 70.4
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 1.1e-52 210.3 136 77.2
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.5e-52 209.9 134 77.6
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.9e-52 209.5 148 73.0
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 2.5e-52 209.1 133 80.5
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 4.3e-52 208.4 133 78.2
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 4.3e-52 208.4 132 78.0
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 4.3e-52 208.4 137 78.1
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 7.3e-52 207.6 133 73.7
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.2e-51 206.8 134 73.1
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.2e-51 206.8 133 76.7
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.2e-51 206.8 133 74.4
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.2e-51 206.8 134 76.1
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.6e-51 206.5 149 69.8
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 2.1e-51 206.1 133 76.7
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.1e-51 206.1 148 72.3
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.1e-51 206.1 148 72.3
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.1e-51 206.1 133 74.4
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 2.1e-51 206.1 134 76.1
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 2.1e-51 206.1 133 77.4
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 3.6e-51 205.3 133 78.2
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 4.7e-51 204.9 150 70.0
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 1.4e-50 203.4 133 73.7
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.8e-50 203.0 133 72.2
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 2.3e-50 202.6 150 69.3
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.3e-50 202.6 148 70.3
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 2.3e-50 202.6 133 71.4
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 4.0e-50 201.8 141 73.0
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 5.2e-50 201.4 133 76.7
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 5.2e-50 201.4 133 75.9
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 8.9e-50 200.7 134 75.4
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 8.9e-50 200.7 141 73.0
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 8.9e-50 200.7 133 72.9
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.2e-49 200.3 143 72.0
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.2e-49 200.3 147 70.1
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.5e-49 199.9 134 73.1
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 1.5e-49 199.9 147 69.4
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 2.0e-49 199.5 146 71.2
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 2.0e-49 199.5 141 72.3
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 2.6e-49 199.1 147 68.7
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 3.4e-49 198.7 135 77.0
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 4.4e-49 198.4 146 69.9
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 4.4e-49 198.4 133 72.9
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 4.4e-49 198.4 134 73.9
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.7e-48 196.4 142 71.1
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 1.7e-48 196.4 147 68.0
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.9e-48 195.7 144 69.4
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 2.9e-48 195.7 143 70.6
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 4.9e-48 194.9 143 67.8
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.9e-48 194.9 134 73.1
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 4.9e-48 194.9 147 68.0
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 4.9e-48 194.9 133 72.2
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 8.3e-48 194.1 143 67.8
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 1.4e-47 193.4 133 74.4
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.9e-47 193.0 147 68.0
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.9e-47 193.0 143 69.9
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.9e-47 193.0 140 70.0
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 3.2e-47 192.2 135 71.9
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 4.1e-47 191.8 133 73.7
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 7.1e-47 191.0 146 67.8
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 7.1e-47 191.0 146 67.8
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 7.1e-47 191.0 148 67.6
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.2e-46 190.3 146 67.8
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.2e-46 190.3 148 67.6
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.2e-46 190.3 149 65.8
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 3.5e-46 188.7 139 70.5
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 4.6e-46 188.3 144 66.7
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.0e-45 187.2 139 70.5
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 1.9e-44 183.0 136 67.6
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 1.2e-43 180.3 119 75.6
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 3.6e-43 178.7 132 65.9
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 1.8e-42 176.4 143 61.5
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 4.0e-42 175.3 143 61.5
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 4.4e-41 171.8 125 70.4
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 4.4e-41 171.8 134 69.4
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 8.4e-40 167.5 114 74.6
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.1e-39 167.2 147 61.2
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.4e-39 166.0 136 60.3
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 2.7e-38 162.5 121 67.8
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 6.6e-37 157.9 104 76.0
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.9e-36 156.4 98 78.6
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 1.8e-34 149.8 132 57.6
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.4e-34 149.4 136 52.9
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 7.6e-33 144.4 152 52.0
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.7e-24 116.7 132 50.0
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.7e-14 82.8 46 84.8
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.8e-11 72.8 41 80.5
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 3.7e-11 72.4 111 43.2
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.4e-10 70.5 111 43.2


User provided reference genes

Program Settings