Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 1.1e-94 350.1 204 100.0
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 8.7e-71 270.8 205 72.2
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 8.1e-69 264.2 208 67.3
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 3.4e-67 258.8 208 65.9
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 9.9e-67 257.3 213 69.0
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 2.2e-66 256.1 205 78.0
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 1.4e-65 253.4 212 66.0
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 2.4e-65 252.7 212 66.0
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 4.2e-65 251.9 212 66.0
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 7.1e-65 251.1 208 66.8
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 9.3e-65 250.8 212 65.1
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 9.3e-65 250.8 212 65.1
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 1.2e-64 250.4 218 66.5
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 1.1e-62 243.8 214 66.8
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 1.5e-62 243.4 214 68.2
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 4.3e-62 241.9 208 65.4
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 5.6e-62 241.5 211 73.0
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 7.4e-62 241.1 217 63.1
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 9.6e-62 240.7 215 61.9
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 9.6e-62 240.7 213 72.3
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 1.3e-61 240.4 213 62.4
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 1.3e-61 240.4 215 61.9
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 1.6e-61 240.0 214 64.0
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.1e-61 239.6 205 64.9
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 2.1e-61 239.6 210 60.0
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 2.1e-61 239.6 210 63.8
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 3.6e-61 238.8 214 65.4
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 3.6e-61 238.8 222 59.9
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 8.1e-61 237.7 174 77.6
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 3.1e-60 235.7 205 61.5
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 4.0e-60 235.3 216 60.6
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 1.2e-59 233.8 215 61.4
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 1.5e-59 233.4 209 60.8
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 3.4e-59 232.3 215 61.9
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 4.5e-59 231.9 212 60.4
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 4.5e-59 231.9 210 60.5
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 7.6e-59 231.1 215 61.4
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 7.6e-59 231.1 220 65.5
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 9.9e-59 230.7 231 58.4
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 9.9e-59 230.7 208 61.5
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 9.9e-59 230.7 208 58.7
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 1.7e-58 229.9 213 68.5
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 8.4e-58 227.6 219 59.8
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.1e-57 227.3 209 65.1
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 1.1e-57 227.3 209 58.9
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 1.9e-57 226.5 221 56.6
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 1.9e-57 226.5 212 60.4
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 2.4e-57 226.1 215 61.4
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 4.2e-57 225.3 220 66.8
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 5.5e-57 224.9 213 66.2
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 5.5e-57 224.9 206 69.4
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 9.3e-57 224.2 218 66.5
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 1.6e-56 223.4 212 68.9
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 1.6e-56 223.4 220 67.3
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 2.7e-56 222.6 220 65.9
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 3.5e-56 222.2 113 92.0
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 3.5e-56 222.2 208 57.7
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 3.5e-56 222.2 218 65.1
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 1.0e-55 220.7 113 91.2
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 1.0e-55 220.7 219 55.7
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 1.3e-55 220.3 206 58.7
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 3.0e-55 219.2 166 74.1
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 3.0e-55 219.2 206 58.3
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 3.9e-55 218.8 207 57.5
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 3.9e-55 218.8 175 65.1
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 3.9e-55 218.8 202 60.4
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 3.9e-55 218.8 220 65.0
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 5.1e-55 218.4 208 56.7
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 6.7e-55 218.0 113 89.4
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 1.5e-54 216.9 199 61.3
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 3.3e-54 215.7 206 58.3
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 9.6e-54 214.2 211 60.2
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 1.3e-53 213.8 198 58.1
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 1.3e-53 213.8 198 58.1
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 2.1e-53 213.0 113 86.7
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 2.1e-53 213.0 208 57.7
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 2.8e-53 212.6 113 86.7
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 3.7e-53 212.2 113 86.7
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 6.2e-53 211.5 174 70.1
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 8.1e-53 211.1 212 54.7
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 8.1e-53 211.1 113 85.8
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 1.1e-52 210.7 210 64.8
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 1.1e-52 210.7 169 76.3
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 1.8e-52 209.9 112 86.6
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 1.8e-52 209.9 204 54.4
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 2.4e-52 209.5 217 54.4
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 2.4e-52 209.5 209 58.4
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 3.1e-52 209.1 111 87.4
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 3.1e-52 209.1 112 86.6
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 3.1e-52 209.1 112 86.6
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 3.1e-52 209.1 112 86.6
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 3.1e-52 209.1 112 86.6
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 3.1e-52 209.1 112 86.6
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 3.1e-52 209.1 218 53.7
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 4.0e-52 208.8 197 69.5
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 4.0e-52 208.8 112 85.7
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 1.2e-51 207.2 201 62.7
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 2.6e-51 206.1 161 64.0
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 4.9e-50 201.8 182 61.0
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 4.9e-50 201.8 224 54.0
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 3.2e-49 199.1 113 79.6
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 3.2e-49 199.1 187 60.4
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 2.7e-48 196.1 106 84.0
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 2.7e-48 196.1 113 78.8
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 6.0e-48 194.9 196 56.1
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 5.1e-47 191.8 113 76.1
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 1.5e-46 190.3 96 88.5
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 2.8e-45 186.0 107 79.4
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 3.7e-45 185.7 112 74.1
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 3.7e-45 185.7 112 75.0
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 1.4e-44 183.7 174 54.6
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 5.3e-44 181.8 109 78.0
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 1.2e-43 180.6 113 73.5
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 4.5e-43 178.7 112 73.2
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 5.9e-43 178.3 183 61.2
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 1.7e-42 176.8 109 76.1
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.4e-41 173.7 109 70.6
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 3.2e-41 172.6 108 72.2
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 1.2e-40 170.6 113 68.1
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 2.2e-37 159.8 166 51.2
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 1.5e-35 153.7 182 54.9
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 3.6e-32 142.5 161 56.5
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 4.3e-30 135.6 113 54.0
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 4.3e-30 135.6 109 56.9
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 3.2e-25 119.4 108 53.7
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 2.6e-22 109.8 79 57.0
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 2.6e-14 83.2 56 62.5
Actinidia36920 Actinidia chinensis HOM05D006377 ORTHO05D057244 8.8e-07 58.2 117 36.8


User provided reference genes

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