Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 1.2e-149 533.1 264 100.0
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 2.7e-109 399.1 262 73.7
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 2.3e-108 396.0 262 72.5
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 1.9e-102 376.3 261 71.3
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 3.2e-102 375.6 261 70.9
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 5.5e-102 374.8 259 69.9
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 9.4e-102 374.0 261 70.1
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 4.7e-101 371.7 257 72.0
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 6.1e-101 371.3 257 72.0
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 2.3e-100 369.4 259 67.2
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.5e-99 364.4 257 70.8
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 1.6e-93 346.7 263 64.6
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.8e-92 343.2 262 63.7
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 2.3e-92 342.8 262 63.4
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 3.0e-92 342.4 263 66.5
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.0e-92 342.4 263 66.5
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.0e-92 342.4 263 66.9
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 4.0e-92 342.0 263 66.5
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 5.2e-92 341.7 262 63.7
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 5.2e-92 341.7 263 66.5
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.2e-91 340.5 261 65.5
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 1.5e-91 340.1 260 65.8
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 2.0e-91 339.7 261 65.1
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 5.7e-91 338.2 260 65.4
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 5.7e-91 338.2 263 63.5
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.2e-90 336.3 263 65.8
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.2e-90 336.3 263 65.8
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 4.8e-90 335.1 263 65.0
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 1.8e-89 333.2 262 62.6
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 5.4e-89 331.6 262 61.5
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 1.2e-88 330.5 259 61.4
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 1.6e-88 330.1 262 62.2
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 2.0e-88 329.7 262 61.5
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 3.5e-88 328.9 263 61.2
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 1.7e-87 326.6 265 61.1
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 1.7e-87 326.6 263 60.5
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 1.7e-87 326.6 262 61.1
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 3.8e-87 325.5 261 64.4
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 6.5e-87 324.7 262 59.9
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 6.5e-87 324.7 260 62.3
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 6.5e-87 324.7 262 62.6
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 1.9e-86 323.2 262 60.7
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 2.5e-86 322.8 259 61.8
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 3.2e-86 322.4 264 61.4
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 3.2e-86 322.4 264 61.4
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 3.2e-86 322.4 264 61.4
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 3.2e-86 322.4 262 60.7
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 1.6e-85 320.1 254 63.0
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 1.6e-85 320.1 257 64.2
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 2.1e-85 319.7 267 61.0
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 2.1e-85 319.7 262 59.2
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 2.7e-85 319.3 263 60.8
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 2.7e-85 319.3 263 58.9
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 8.0e-85 317.8 257 65.4
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 1.4e-84 317.0 265 59.2
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 1.8e-84 316.6 261 61.7
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 4.0e-84 315.5 265 58.9
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 1.2e-83 313.9 263 57.4
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 1.5e-83 313.5 220 68.6
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 4.4e-83 312.0 263 57.8
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 9.8e-83 310.8 262 58.0
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 2.2e-82 309.7 262 58.4
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 2.8e-82 309.3 265 58.5
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 6.3e-82 308.1 258 58.5
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.8e-81 306.6 265 57.7
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 2.7e-80 302.8 264 57.6
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 4.5e-80 302.0 263 57.0
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 1.3e-79 300.4 263 56.7
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 2.3e-79 299.7 263 56.3
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 8.6e-79 297.7 259 56.0
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 8.6e-79 297.7 263 56.7
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 1.5e-78 297.0 259 56.8
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 4.3e-78 295.4 265 58.5
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 5.6e-78 295.0 258 56.2
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 5.6e-78 295.0 256 56.2
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 2.1e-77 293.1 262 55.0
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 4.7e-77 292.0 259 56.8
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 1.8e-76 290.0 264 56.4
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 2.3e-76 289.7 213 63.8
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 6.8e-76 288.1 264 57.6
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 9.8e-75 284.3 271 56.1
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 9.8e-75 284.3 263 57.4
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 2.2e-74 283.1 264 54.2
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 1.8e-73 280.0 229 62.0
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 5.9e-72 275.0 322 47.5
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 8.6e-71 271.2 254 53.1
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 3.3e-70 269.2 222 59.5
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 9.5e-70 267.7 228 60.5
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 1.2e-69 267.3 233 58.8
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 2.3e-68 263.1 245 51.4
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 3.4e-67 259.2 190 66.8
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 1.3e-66 257.3 236 55.1
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 4.9e-66 255.4 219 58.9
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 1.2e-61 240.7 256 48.0
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 4.0e-60 235.7 164 70.1
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.2e-59 234.2 166 69.9
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 6.4e-58 228.4 264 47.3
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 6.4e-58 228.4 234 50.4
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 2.1e-53 213.4 234 48.7
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.1e-52 211.1 153 64.7
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 1.4e-52 210.7 255 45.9
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 9.2e-49 198.0 188 55.3
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 2.6e-43 179.9 158 53.8
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 2.6e-43 179.9 158 53.8
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 2.6e-43 179.9 158 53.8
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 4.2e-41 172.6 158 53.8
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 4.6e-40 169.1 156 53.2
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 1.0e-39 167.9 249 38.2
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 1.9e-38 163.7 154 50.6
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 1.1e-36 157.9 263 33.1
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 5.3e-36 155.6 279 32.6
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 4.5e-35 152.5 117 59.8
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 9.3e-33 144.8 167 50.3
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 1.0e-31 141.4 124 52.4
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 6.6e-31 138.7 198 37.9
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 2.4e-28 130.2 109 61.5
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 4.5e-27 125.9 102 59.8
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.3e-26 124.4 163 47.2
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 7.1e-25 118.6 102 57.8
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 2.7e-24 116.7 76 73.7
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 4.8e-21 105.9 71 62.0
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 1.5e-19 100.9 80 58.8
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.7e-18 97.4 80 61.2
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 6.5e-18 95.5 94 48.9
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 3.2e-17 93.2 165 35.8
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 1.5e-14 84.3 95 47.4
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 2.5e-14 83.6 158 35.4
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 1.6e-13 80.9 48 77.1
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 5.3e-12 75.9 67 53.7


User provided reference genes

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