Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G071208 Manihot esculenta HOM05D000002 ORTHO05D030083 5.2e-81 304.3 149 100.0
SEGI_14493 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.1e-38 161.0 128 57.0
GSVIVG01014104001 Vitis vinifera HOM05D000043 ORTHO05D000223 1.5e-35 153.3 123 53.7
Dinv01219 Davidia involucrata HOM05D000002 ORTHO05D000001 1.7e-31 139.8 123 50.4
CiPaw.11G068500 Carya illinoinensis HOM05D000002 ORTHO05D000001 7.1e-30 134.4 129 48.1
GSVIVG01021646001 Vitis vinifera HOM05D000002 ORTHO05D001134 7.1e-22 107.8 125 40.0
CSS0006396 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-21 106.3 124 40.3
Sabra16G0135200 Salix brachista HOM05D000002 ORTHO05D001134 2.1e-21 106.3 128 39.8
Ah.04g154410 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.7e-20 103.2 123 38.2
CSS0031425 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-20 101.7 124 39.5
AL5G19750 Arabidopsis lyrata HOM05D000002 ORTHO05D000001 1.5e-19 100.1 129 38.8
EL10Ac6g13863 Beta vulgaris HOM05D000002 ORTHO05D001134 1.5e-19 100.1 122 39.3
EL10Ac1g01667 Beta vulgaris HOM05D000002 ORTHO05D000001 1.9e-19 99.8 122 38.5
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-19 99.8 120 40.0
CSS0005552 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-19 98.2 124 37.1
CSS0025606 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-19 98.2 124 37.1
CSS0038035 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-19 98.2 124 37.1
CiPaw.10G127600 Carya illinoinensis HOM05D000002 ORTHO05D001134 7.3e-19 97.8 124 37.9
CSS0022318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-18 95.9 124 37.1
ECA232G4604 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-18 95.9 121 41.3
MD15G1002900 Malus domestica HOM05D000002 ORTHO05D001134 3.6e-18 95.5 143 35.7
ECA232G0083 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.2e-18 94.7 122 41.0
ECA236G0116 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-18 94.7 121 39.7
ECA233G4495 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-17 94.0 121 40.5
EL10Ac1g02317 Beta vulgaris HOM05D000002 ORTHO05D000001 1.4e-17 93.6 120 38.3
ECA232G3490 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-17 93.6 126 38.1
ECA236G4726 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-17 92.8 121 40.5
ECA232G2907 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-17 92.4 129 39.5
ECA240G3666 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-17 92.0 121 40.5
ECA238G0101 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-17 91.7 121 38.8
ECA240G2809 Erigeron canadensis HOM05D000002 ORTHO05D001134 5.3e-17 91.7 121 38.8
ECA240G3441 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-17 91.7 121 38.8
ECA246G2321 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-17 91.7 121 38.8
ECA248G0111 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-17 91.7 121 38.8
ECA233G4344 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-17 91.3 121 38.8
ECA236G1135 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-17 91.3 123 38.2
ECA236G2482 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-17 91.3 121 38.8
ECA248G2070 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-17 91.3 125 38.4
ECA248G2336 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-17 91.3 120 39.2
ECA238G4751 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-17 90.9 121 40.5
ECA233G0511 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-16 90.5 120 39.2
ECA234G1050 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-16 90.5 121 38.0
ECA238G1308 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-16 89.7 121 38.8
ECA246G2881 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-16 89.7 119 40.3
ECA238G2217 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-16 88.6 121 38.0
ECA240G1911 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-16 88.6 121 37.2
ECA236G0974 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-16 88.2 120 38.3
ECA238G0421 Erigeron canadensis HOM05D000122 ORTHO05D002085 7.6e-16 87.8 120 37.5
HanXRQChr05g0135361 Helianthus annuus HOM05D000002 ORTHO05D000001 7.6e-16 87.8 122 35.2
ECA232G1418 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-16 87.4 121 38.0
ECA232G2889 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-15 87.0 120 37.5
ECA238G0412 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-15 87.0 120 38.3
HanXRQChr02g0050701 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-15 87.0 122 35.2
HanXRQChr03g0082121 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-15 87.0 122 35.2
HanXRQChr04g0123831 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-15 87.0 122 35.2
HanXRQChr05g0163231 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-15 87.0 122 35.2
HanXRQChr14g0441811 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-15 87.0 122 35.2
ECA232G4055 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-15 86.3 120 37.5
ECA240G2188 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-15 86.3 120 37.5
ECA236G0811 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-15 85.5 120 37.5
ECA233G4811 Erigeron canadensis HOM05D000002 ORTHO05D001134 4.9e-15 85.1 120 36.7
ECA233G0481 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-15 84.7 119 37.8
ECA232G0970 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-14 84.0 120 36.7
ECA233G2911 Erigeron canadensis HOM05D000002 ORTHO05D001134 1.1e-14 84.0 120 36.7
MD04G1043300 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-14 84.0 138 32.6
Gorai.009G359200 Gossypium raimondii HOM05D029342 ORTHO05D029837 1.4e-14 83.6 58 63.8
ECA232G0086 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-14 82.4 125 36.8
ECA233G0623 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-14 82.4 120 35.8
FvH4_6g40841 Fragaria vesca HOM05D000002 ORTHO05D000001 3.2e-14 82.4 135 31.1
CSS0026966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-13 80.5 108 38.0
Ciclev10010735m.g Citrus clementina HOM05D000002 ORTHO05D017783 3.5e-13 79.0 75 50.7
ECA232G3829 Erigeron canadensis HOM05D017397 ORTHO05D001134 3.9e-12 75.5 111 37.8
EL10Ac5g11427 Beta vulgaris HOM05D000002 ORTHO05D001134 2.5e-11 72.8 58 50.0
CSS0040508 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-11 72.8 92 33.7
CiPaw.03G151800 Carya illinoinensis HOM05D000002 ORTHO05D000001 3.3e-11 72.4 99 36.4
ECA247G1980 Erigeron canadensis HOM05D000315 ORTHO05D000001 5.6e-11 71.6 102 38.2
CSS0045864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-10 70.5 92 32.6
Gorai.010G061700 Gossypium raimondii HOM05D000002 ORTHO05D001134 2.8e-10 69.3 62 51.6
Atru.chr1.2215 Acer truncatum HOM05D000002 ORTHO05D000001 8.1e-10 67.8 130 31.5
ECA240G0189 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-09 66.6 85 40.0
ECA240G2383 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-09 66.2 123 32.5
AUR62026226 Chenopodium quinoa HOM05D000002 ORTHO05D001134 3.1e-09 65.9 108 37.0
SEGI_31962 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.0e-09 65.5 147 27.9
AagrBONN_evm.TU.Sc2ySwM_344.3705 Anthoceros agrestis HOM05D000002 ORTHO05D000001 5.3e-09 65.1 131 29.8
ECA232G4270 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-09 65.1 130 31.5
ECA233G1490 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-09 65.1 130 31.5
ECA234G0487 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-09 65.1 130 31.5
ECA234G4291 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-09 65.1 130 31.5
ECA234G4634 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-09 65.1 130 31.5
ECA236G3009 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-09 65.1 130 31.5
ECA248G1621 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-09 65.1 130 31.5
CiPaw.09G118100 Carya illinoinensis HOM05D000002 ORTHO05D001134 6.9e-09 64.7 50 52.0
ECA234G4641 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-09 64.7 130 31.5
ECA246G2723 Erigeron canadensis HOM05D000002 ORTHO05D001134 6.9e-09 64.7 91 38.5
CiPaw.09G096200 Carya illinoinensis HOM05D000002 ORTHO05D001134 9.0e-09 64.3 50 50.0
ECA233G5329 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-09 64.3 126 31.0
CSS0028775 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-08 63.9 84 39.3
ECA232G4978 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-08 63.9 130 30.0
ECA248G2941 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-08 63.5 130 30.8
Sabra16G0095800 Salix brachista HOM05D000002 ORTHO05D001134 1.5e-08 63.5 127 30.7
AagrBONN_evm.TU.Sc2ySwM_117.1692 Anthoceros agrestis HOM05D000002 ORTHO05D000001 3.4e-08 62.4 130 28.5
CiPaw.08G099000 Carya illinoinensis HOM05D000002 ORTHO05D001134 5.8e-08 61.6 50 50.0
Ah.01g010720 Amaranthus hybridus HOM05D000002 ORTHO05D001134 7.6e-08 61.2 87 33.3
ECA111G0001 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-08 61.2 95 34.7
ECA240G4607 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-08 61.2 95 34.7
ECA246G0345 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-07 59.7 62 46.8
Gohir.D05G335650 Gossypium hirsutum HOM05D029342 ORTHO05D029837 2.2e-07 59.7 39 66.7
HanXRQChr11g0327471 Helianthus annuus HOM05D000002 ORTHO05D000001 4.9e-07 58.5 133 29.3
SGA_v2.0_scaffold43G16507 Striga asiatica HOM05D000002 ORTHO05D000001 4.9e-07 58.5 123 33.3
SGA_v2.0_scaffold48G17859 Striga asiatica HOM05D000002 ORTHO05D000001 4.9e-07 58.5 123 33.3
EL10Ac2g03361 Beta vulgaris HOM05D000002 ORTHO05D023815 1.1e-06 57.4 42 50.0
CSS0048183 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 129 27.9
Sabra11G0132900 Salix brachista HOM05D000440 ORTHO05D017783 1.1e-06 57.4 56 50.0
CSS0000004 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 57.0 129 27.9
Sopen04g026340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.0 120 29.2
CAN.G1315.4 Capsicum annuum HOM05D001584 ORTHO05D001472 1.9e-06 56.6 131 29.0
SEGI_26654 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.9e-06 56.6 147 25.2
Sopen00g011440 Solanum pennellii HOM05D000002 ORTHO05D030083 1.9e-06 56.6 85 25.9
BolC3t17182H Brassica oleracea HOM05D000002 ORTHO05D000001 2.4e-06 56.2 94 34.0
ECA233G0399 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 130 30.0
HanXRQChr06g0180631 Helianthus annuus HOM05D000002 ORTHO05D000001 2.4e-06 56.2 122 27.0
Sabra16G0037300 Salix brachista HOM05D004666 ORTHO05D017783 3.2e-06 55.8 56 48.2
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-06 55.8 120 28.3
SpUn1341_0010 Schrenkiella parvula HOM05D000002 ORTHO05D001134 5.5e-06 55.1 90 34.4
SEGI_22621 Sequoiadendron giganteum HOM05D002347 ORTHO05D014789 5.5e-06 55.1 147 25.2
SEGI_35341 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.5e-06 55.1 147 25.2
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen01g021410 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen02g017450 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen04g011600 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen04g018310 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen04g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen05g009710 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen05g021830 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen10g016600 Solanum pennellii HOM05D000002 ORTHO05D001544 5.5e-06 55.1 120 28.3
Sopen11g015120 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen11g015130 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen12g003860 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen12g023960 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
Sopen12g023970 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.1 120 28.3
BraA08t32321Z Brassica rapa HOM05D000002 ORTHO05D000001 7.1e-06 54.7 94 33.0
SHI44658 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-06 54.7 144 23.6
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-06 54.7 120 27.5
Sopen12g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-06 54.7 120 27.5
Sopen07g002700 Solanum pennellii HOM05D000002 ORTHO05D000001 9.3e-06 54.3 120 28.3


User provided reference genes

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