Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.6e-169 599.4 303 100.0
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.6e-169 599.4 303 100.0
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 4.8e-150 534.6 303 87.5
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 8.1e-150 533.9 300 87.7
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 1.7e-147 526.2 303 85.1
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 4.9e-147 524.6 303 86.8
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 8.4e-147 523.9 301 84.7
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 3.5e-145 518.5 302 83.4
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 3.5e-145 518.5 303 83.2
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.0e-144 516.9 303 81.8
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 1.0e-144 516.9 303 81.8
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.0e-144 516.9 303 81.5
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.8e-144 516.2 301 84.4
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.8e-144 516.2 303 81.8
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 3.9e-144 515.0 304 83.9
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 3.3e-143 511.9 303 81.2
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.3e-142 510.0 301 82.4
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.6e-142 509.6 303 82.8
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 2.1e-142 509.2 303 83.5
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 2.8e-142 508.8 301 83.4
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 4.8e-142 508.1 302 81.8
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.1e-141 506.9 303 82.5
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.8e-141 506.1 301 82.1
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.8e-141 506.1 301 82.1
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 4.1e-141 505.0 303 80.9
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 5.3e-141 504.6 303 82.2
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 9.0e-141 503.8 303 81.8
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.2e-140 503.4 301 82.4
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.6e-140 502.3 300 81.3
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.6e-140 502.3 303 82.8
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 2.6e-140 502.3 301 81.7
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 5.9e-140 501.1 303 79.9
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.6e-140 500.7 303 82.5
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.0e-139 500.4 303 79.5
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.3e-139 500.0 303 82.5
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 2.2e-139 499.2 300 80.7
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.8e-139 498.4 303 81.8
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.0e-139 498.0 301 81.1
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 8.5e-139 497.3 303 80.9
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 8.5e-139 497.3 303 80.9
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.1e-138 496.9 301 80.7
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.1e-138 496.9 303 81.5
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.4e-138 496.5 303 79.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 1.9e-138 496.1 303 80.9
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 5.5e-138 494.6 303 80.2
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 7.2e-138 494.2 303 79.2
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.7e-137 492.3 303 77.9
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.6e-137 491.9 303 79.2
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.8e-136 489.6 303 78.5
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 3.9e-136 488.4 303 77.9
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.5e-135 486.5 303 77.9
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 2.5e-135 485.7 303 77.6
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 2.5e-135 485.7 303 77.9
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 3.7e-134 481.9 299 77.6
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 4.8e-134 481.5 303 76.9
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.4e-133 479.9 303 78.2
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 5.9e-132 474.6 303 73.9
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 7.7e-132 474.2 303 77.9
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.3e-131 473.4 295 77.6
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 1.3e-131 473.4 301 78.4
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.5e-130 469.2 293 78.5
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.2e-129 466.8 303 73.6
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.4e-128 463.4 302 74.2
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.4e-128 463.4 305 75.7
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.1e-127 460.3 275 84.0
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.0e-127 459.5 303 72.9
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.3e-127 458.8 305 73.8
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 5.7e-127 458.0 306 74.5
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 9.7e-127 457.2 300 73.7
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.3e-126 456.8 306 74.5
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.8e-126 454.9 300 73.7
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.8e-126 454.9 300 73.7
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 6.3e-126 454.5 300 73.3
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.1e-125 453.8 300 73.3
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.4e-125 452.6 301 73.4
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 9.1e-125 450.7 287 78.0
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 9.1e-125 450.7 300 72.7
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 3.4e-124 448.7 300 72.7
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 3.4e-124 448.7 300 71.0
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 4.5e-124 448.4 300 72.0
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 4.5e-124 448.4 300 73.0
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 4.5e-124 448.4 305 74.1
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 3.8e-123 445.3 300 71.7
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 2.5e-122 442.6 300 70.3
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 4.2e-122 441.8 311 71.4
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 9.4e-122 440.7 306 69.9
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.2e-121 440.3 300 71.0
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.2e-121 440.3 300 70.3
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.7e-121 439.1 300 71.7
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.7e-121 439.1 300 70.3
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.4e-120 436.8 300 69.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.4e-120 436.8 300 69.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.4e-120 436.8 300 69.7
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 6.3e-118 427.9 306 69.0
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 8.2e-118 427.6 303 70.6
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.3e-115 420.2 249 80.7
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.0e-112 410.6 251 78.5
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 4.4e-111 405.2 299 68.9
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.8e-104 383.3 215 85.1
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 3.0e-104 382.5 300 63.7
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.2e-103 380.6 227 80.6
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.6e-103 379.4 235 78.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 9.8e-103 377.5 261 72.4
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.2e-102 376.3 232 78.9
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.9e-99 365.9 221 79.2
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.2e-98 362.1 225 76.9
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 6.1e-97 358.2 305 58.7
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 4.4e-95 352.1 249 67.1
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.3e-94 350.5 219 78.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.7e-94 350.1 255 65.9
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.0e-88 330.9 277 59.6
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 4.4e-87 325.5 303 58.7
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.5e-79 300.4 340 48.8
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.1e-74 284.3 173 75.1
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.7e-59 233.8 316 43.4
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.7e-51 207.2 143 74.8
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.5e-50 204.1 163 62.0
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 4.0e-48 196.1 303 42.6
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.8e-43 180.6 343 35.9
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 2.0e-39 167.2 177 49.7
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.9e-38 163.3 105 77.1
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 3.1e-32 143.3 91 74.7
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.2e-31 141.4 88 69.3
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 3.2e-29 133.3 91 73.6
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 9.7e-26 121.7 86 72.1
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 9.0e-24 115.2 351 29.3
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.5e-23 114.4 138 48.6
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.0e-22 111.7 72 69.4
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 6.7e-19 99.0 64 79.7
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.1e-16 90.1 61 60.7
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 5.0e-14 82.8 46 82.6


User provided reference genes

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